RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
GSE1-203ENST00000405402 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.231e-7■■■■□ 19.5
GSE1-203ENST00000405402 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
GSE1-203ENST00000405402 GCC2Q8IWJ2 1684 aa16.49■□□□□ 0.23
GSE1-203ENST00000405402 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
GSE1-203ENST00000405402 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
GSE1-203ENST00000405402 DTNBO60941 627 aa16.48■□□□□ 0.23
GSE1-203ENST00000405402 JAKMIP1Q96N16 626 aaKnown RBP16.48■□□□□ 0.23
GSE1-203ENST00000405402 RBM27Q9P2N5 1060 aaKnown RBP16.48■□□□□ 0.23
GSE1-203ENST00000405402 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
GSE1-203ENST00000405402 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
GSE1-203ENST00000405402 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
GSE1-203ENST00000405402 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
GSE1-203ENST00000405402 CPLX1O14810 134 aa16.47■□□□□ 0.23
GSE1-203ENST00000405402 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
GSE1-203ENST00000405402 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
GSE1-203ENST00000405402 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
GSE1-203ENST00000405402 MBD3O95983 291 aa16.47■□□□□ 0.23
GSE1-203ENST00000405402 PPFIA3O75145 1194 aa16.46■□□□□ 0.23
GSE1-203ENST00000405402 EIF4A2Q14240 407 aaKnown RBP16.46■□□□□ 0.23
GSE1-203ENST00000405402 SMC5Q8IY18 1101 aa16.46■□□□□ 0.23
GSE1-203ENST00000405402 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
GSE1-203ENST00000405402 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
GSE1-203ENST00000405402 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 MCM2P49736 904 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 BAG4O95429 457 aaKnown RBP16.45■□□□□ 0.22
GSE1-203ENST00000405402 ATF3P18847 181 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 TTC22Q5TAA0 569 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 CCDC173Q0VFZ6 552 aa16.45■□□□□ 0.22
GSE1-203ENST00000405402 IL16Q14005 1332 aa16.44■□□□□ 0.22
GSE1-203ENST00000405402 NSD2O96028 1365 aa16.44■□□□□ 0.22
GSE1-203ENST00000405402 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
GSE1-203ENST00000405402 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
GSE1-203ENST00000405402 BLMP54132 1417 aaPredicted RBP16.44■□□□□ 0.22
GSE1-203ENST00000405402 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
GSE1-203ENST00000405402 ZMYM4Q5VZL5 1548 aa16.44■□□□□ 0.22
GSE1-203ENST00000405402 STRN4Q9NRL3 753 aa16.44■□□□□ 0.22
GSE1-203ENST00000405402 PI4KAP2A4QPH2 592 aa16.43■□□□□ 0.22
GSE1-203ENST00000405402 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
GSE1-203ENST00000405402 SASS6Q6UVJ0 657 aa16.43■□□□□ 0.22
GSE1-203ENST00000405402 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.43■□□□□ 0.22
GSE1-203ENST00000405402 PI4KAP1Q8N8J0 262 aa16.43■□□□□ 0.22
GSE1-203ENST00000405402 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
GSE1-203ENST00000405402 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
GSE1-203ENST00000405402 G2E3Q7L622 706 aa16.42■□□□□ 0.22
GSE1-203ENST00000405402 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
GSE1-203ENST00000405402 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
GSE1-203ENST00000405402 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
GSE1-203ENST00000405402 ATP2B1P20020 1258 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 MTHFSDQ2M296 383 aaKnown RBP16.41■□□□□ 0.22
GSE1-203ENST00000405402 KDM5CP41229 1560 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 TCEANC2Q96MN5 208 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 TRIM5Q9C035 493 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 PLA2R1Q13018 1463 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 PTCD1O75127 700 aaKnown RBP16.41■□□□□ 0.22
GSE1-203ENST00000405402 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 WDR7Q9Y4E6 1490 aa16.41■□□□□ 0.22
GSE1-203ENST00000405402 CDK11BP21127 795 aaKnown RBP16.4■□□□□ 0.22
GSE1-203ENST00000405402 CAMK4Q16566 473 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 PTPRTO14522 1441 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 PSMA5P28066 241 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 ANKRD44Q8N8A2 993 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
GSE1-203ENST00000405402 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
GSE1-203ENST00000405402 PDE1AP54750 535 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 PLEKHM2Q8IWE5 1019 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 PPIP5K1Q6PFW1 1433 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 TPM4P67936 248 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
GSE1-203ENST00000405402 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
GSE1-203ENST00000405402 CCAR2Q8N163 923 aaKnown RBP16.38■□□□□ 0.21
GSE1-203ENST00000405402 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
GSE1-203ENST00000405402 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■■□ 23.1
GSE1-203ENST00000405402 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
GSE1-203ENST00000405402 DNAAF4Q8WXU2 420 aa16.38■□□□□ 0.21
GSE1-203ENST00000405402 PES1O00541 588 aaKnown RBP16.38■□□□□ 0.21
GSE1-203ENST00000405402 TRDNQ13061 729 aa16.38■□□□□ 0.21
GSE1-203ENST00000405402 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
GSE1-203ENST00000405402 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
GSE1-203ENST00000405402 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
GSE1-203ENST00000405402 BCORL1Q5H9F3 1711 aa16.37■□□□□ 0.21
GSE1-203ENST00000405402 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
GSE1-203ENST00000405402 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
GSE1-203ENST00000405402 PHF8Q9UPP1 1060 aa16.37■□□□□ 0.21
GSE1-203ENST00000405402 CABP4P57796 275 aa16.36■□□□□ 0.21
GSE1-203ENST00000405402 DCTPP1Q9H773 170 aa16.36■□□□□ 0.21
GSE1-203ENST00000405402 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
GSE1-203ENST00000405402 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
GSE1-203ENST00000405402 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
GSE1-203ENST00000405402 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
GSE1-203ENST00000405402 PTPRCP08575 1304 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms