RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TSPY26PQ9H489 355 aa11.66□□□□□ -0.54
SMC1B-202ENST00000404354 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
SMC1B-202ENST00000404354 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
SMC1B-202ENST00000404354 HCLS1P14317 486 aaPredicted RBP11.65□□□□□ -0.54
SMC1B-202ENST00000404354 G2E3Q7L622 706 aa11.65□□□□□ -0.54
SMC1B-202ENST00000404354 CLEC17AQ6ZS10 378 aa11.65□□□□□ -0.54
SMC1B-202ENST00000404354 SPC24Q8NBT2 197 aa11.65□□□□□ -0.54
SMC1B-202ENST00000404354 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
SMC1B-202ENST00000404354 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
SMC1B-202ENST00000404354 FBXO31Q5XUX0 539 aaPredicted RBP11.65□□□□□ -0.55
SMC1B-202ENST00000404354 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.55
SMC1B-202ENST00000404354 ANKRD44Q8N8A2 993 aa11.65□□□□□ -0.55
SMC1B-202ENST00000404354 CFAP44Q96MT7 982 aa11.65□□□□□ -0.55
SMC1B-202ENST00000404354 IFT57Q9NWB7 429 aa11.65□□□□□ -0.55
SMC1B-202ENST00000404354 TET3O43151 1660 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
SMC1B-202ENST00000404354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
SMC1B-202ENST00000404354 ARHGAP45Q92619 1136 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 PRDM4Q9UKN5 801 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 USP48Q86UV5 1035 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 KIF1BO60333 1816 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 FIBPO43427 364 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 CPA1P15085 419 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 SASS6Q6UVJ0 657 aa11.64□□□□□ -0.55
SMC1B-202ENST00000404354 NSD2O96028 1365 aa11.63□□□□□ -0.55
SMC1B-202ENST00000404354 MSH6P52701 1360 aa11.63□□□□□ -0.55
SMC1B-202ENST00000404354 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
SMC1B-202ENST00000404354 PDE1AP54750 535 aa11.63□□□□□ -0.55
SMC1B-202ENST00000404354 UNC5CLQ8IV45 518 aa11.63□□□□□ -0.55
SMC1B-202ENST00000404354 CNPY2Q9Y2B0 182 aa11.63□□□□□ -0.55
SMC1B-202ENST00000404354 FOXO3O43524 673 aa11.62□□□□□ -0.55
SMC1B-202ENST00000404354 IBTKQ9P2D0 1353 aaPredicted RBP11.62□□□□□ -0.55
SMC1B-202ENST00000404354 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
SMC1B-202ENST00000404354 IL25Q9H293 177 aa11.62□□□□□ -0.55
SMC1B-202ENST00000404354 ADCY5O95622 1261 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 IL13P35225 146 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 ADGRB2O60241 1585 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 DYNC1I1O14576 645 aa11.61□□□□□ -0.55
SMC1B-202ENST00000404354 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
SMC1B-202ENST00000404354 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
SMC1B-202ENST00000404354 MBD3O95983 291 aa11.6□□□□□ -0.55
SMC1B-202ENST00000404354 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
SMC1B-202ENST00000404354 NOLC1Q14978 699 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMC1B-202ENST00000404354 RPAP2Q8IXW5 612 aaPredicted RBP11.6□□□□□ -0.55
SMC1B-202ENST00000404354 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
SMC1B-202ENST00000404354 BRD1O95696 1058 aa11.6□□□□□ -0.55
SMC1B-202ENST00000404354 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
SMC1B-202ENST00000404354 MED14O60244 1454 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 PNMA6EA0A0J9YXQ4 647 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 PPRC1Q5VV67 1664 aaKnown RBP11.59□□□□□ -0.55
SMC1B-202ENST00000404354 KIAA1210Q9ULL0 1709 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 MLECQ14165 292 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 ESYT1Q9BSJ8 1104 aa11.59□□□□□ -0.55
SMC1B-202ENST00000404354 RTL1A6NKG5 1358 aa11.58□□□□□ -0.55
SMC1B-202ENST00000404354 COG3Q96JB2 828 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 PTCH1Q13635 1447 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
SMC1B-202ENST00000404354 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 NRXN1Q9ULB1 1477 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 EFCAB6Q5THR3 1501 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 RPGRIP1LQ68CZ1 1315 aa11.58□□□□□ -0.56
SMC1B-202ENST00000404354 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 MCCP23508 829 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 FKBP5Q13451 457 aaPredicted RBP11.57□□□□□ -0.56
SMC1B-202ENST00000404354 CAMK4Q16566 473 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 SYAP1Q96A49 352 aaPredicted RBP11.57□□□□□ -0.56
SMC1B-202ENST00000404354 HMMRO75330 724 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 ATP2B3Q16720 1220 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 HSP90AB2PQ58FF8 381 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 GLI2P10070 1586 aa11.57□□□□□ -0.56
SMC1B-202ENST00000404354 MX1P20591 662 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 FERMT3Q86UX7 667 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
SMC1B-202ENST00000404354 CHMLP26374 656 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 TERF1P54274 439 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 ATP10DQ9P241 1426 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
SMC1B-202ENST00000404354 VPS37CA5D8V6 355 aaPredicted RBP11.55□□□□□ -0.56
SMC1B-202ENST00000404354 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 LRRCC1Q9C099 1032 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 RIMS2Q9UQ26 1411 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 MROH1Q8NDA8 1641 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 PIK3R4Q99570 1358 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMC1B-202ENST00000404354 MYRIPQ8NFW9 859 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 PYCARDQ9ULZ3 195 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms