RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 AMPHP49418 695 aa12.49□□□□□ -0.41
NIP7P3-201ENST00000404319 LTV1Q96GA3 475 aaPredicted RBP12.49□□□□□ -0.41
NIP7P3-201ENST00000404319 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
NIP7P3-201ENST00000404319 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
NIP7P3-201ENST00000404319 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
NIP7P3-201ENST00000404319 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
NIP7P3-201ENST00000404319 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
NIP7P3-201ENST00000404319 NLGN2Q8NFZ4 835 aa12.48□□□□□ -0.41
NIP7P3-201ENST00000404319 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
NIP7P3-201ENST00000404319 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
NIP7P3-201ENST00000404319 USP47Q96K76 1375 aa12.47□□□□□ -0.41
NIP7P3-201ENST00000404319 COG3Q96JB2 828 aa12.47□□□□□ -0.41
NIP7P3-201ENST00000404319 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
NIP7P3-201ENST00000404319 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
NIP7P3-201ENST00000404319 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
NIP7P3-201ENST00000404319 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.41
NIP7P3-201ENST00000404319 YBX3P16989 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
NIP7P3-201ENST00000404319 KCNQ4P56696 695 aa12.45□□□□□ -0.42
NIP7P3-201ENST00000404319 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
NIP7P3-201ENST00000404319 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
NIP7P3-201ENST00000404319 HSPA6P17066 643 aa12.44□□□□□ -0.42
NIP7P3-201ENST00000404319 LTN1O94822 1766 aa12.43□□□□□ -0.42
NIP7P3-201ENST00000404319 HOXC9P31274 260 aa12.43□□□□□ -0.42
NIP7P3-201ENST00000404319 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
NIP7P3-201ENST00000404319 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
NIP7P3-201ENST00000404319 MON2Q7Z3U7 1717 aa12.42□□□□□ -0.42
NIP7P3-201ENST00000404319 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
NIP7P3-201ENST00000404319 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
NIP7P3-201ENST00000404319 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
NIP7P3-201ENST00000404319 ATP10DQ9P241 1426 aa12.41□□□□□ -0.42
NIP7P3-201ENST00000404319 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
NIP7P3-201ENST00000404319 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
NIP7P3-201ENST00000404319 MAP3K19Q56UN5 1328 aa12.4□□□□□ -0.42
NIP7P3-201ENST00000404319 SMG6Q86US8 1419 aaKnown RBP12.4□□□□□ -0.42
NIP7P3-201ENST00000404319 AK7Q96M32 723 aa12.4□□□□□ -0.42
NIP7P3-201ENST00000404319 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
NIP7P3-201ENST00000404319 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
NIP7P3-201ENST00000404319 CD163L1Q9NR16 1453 aa12.39□□□□□ -0.43
NIP7P3-201ENST00000404319 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 MPRIPQ6WCQ1 1025 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
NIP7P3-201ENST00000404319 LY75O60449 1722 aa12.37□□□□□ -0.43
NIP7P3-201ENST00000404319 APLP1P51693 650 aa12.37□□□□□ -0.43
NIP7P3-201ENST00000404319 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
NIP7P3-201ENST00000404319 NSD2O96028 1365 aa12.37□□□□□ -0.43
NIP7P3-201ENST00000404319 PALLDQ8WX93 1383 aa12.35□□□□□ -0.43
NIP7P3-201ENST00000404319 SSFA2P28290 1259 aa12.35□□□□□ -0.43
NIP7P3-201ENST00000404319 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
NIP7P3-201ENST00000404319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
NIP7P3-201ENST00000404319 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
NIP7P3-201ENST00000404319 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
NIP7P3-201ENST00000404319 TUBGCP6Q96RT7 1819 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 TOMM70O94826 608 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 PHF14O94880 888 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 FBLN1P23142 703 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 TGFB2P61812 414 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 RRS1Q15050 365 aaKnown RBP12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
NIP7P3-201ENST00000404319 MEGF6O75095 1541 aa12.32□□□□□ -0.44
NIP7P3-201ENST00000404319 ADCY9O60503 1353 aa12.32□□□□□ -0.44
NIP7P3-201ENST00000404319 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
NIP7P3-201ENST00000404319 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
NIP7P3-201ENST00000404319 FYB1O15117 783 aa12.32□□□□□ -0.44
NIP7P3-201ENST00000404319 INSRP06213 1382 aa12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 NLGN1Q8N2Q7 840 aa12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 PIGBQ92521 554 aa12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
NIP7P3-201ENST00000404319 TONSLQ96HA7 1378 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 C5P01031 1676 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 KIF3CO14782 793 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 CYP27B1O15528 508 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 SIK1P57059 783 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 TMF1P82094 1093 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 TRAPPC3LQ5T215 181 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 GGNBP2Q9H3C7 697 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 FLT4P35916 1363 aa12.3□□□□□ -0.44
NIP7P3-201ENST00000404319 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
NIP7P3-201ENST00000404319 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
NIP7P3-201ENST00000404319 TESK2Q96S53 571 aa12.29□□□□□ -0.44
NIP7P3-201ENST00000404319 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
NIP7P3-201ENST00000404319 GNPATO15228 680 aa12.28□□□□□ -0.44
NIP7P3-201ENST00000404319 MMP10P09238 476 aa12.28□□□□□ -0.44
NIP7P3-201ENST00000404319 WWC3Q9ULE0 1092 aa12.28□□□□□ -0.44
NIP7P3-201ENST00000404319 RTCBQ9Y3I0 505 aaKnown RBP12.28□□□□□ -0.44
NIP7P3-201ENST00000404319 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
NIP7P3-201ENST00000404319 IFNL2Q8IZJ0 200 aa12.27□□□□□ -0.45
NIP7P3-201ENST00000404319 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
NIP7P3-201ENST00000404319 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
NIP7P3-201ENST00000404319 C4BP0C0L5 1744 aa12.26□□□□□ -0.45
NIP7P3-201ENST00000404319 RGPD2P0DJD1 1756 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms