RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 CRB1P82279 1406 aa17.13■□□□□ 0.33
CEACAM1-206ENST00000403136 VAMP4O75379 141 aa17.12■□□□□ 0.33
CEACAM1-206ENST00000403136 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
CEACAM1-206ENST00000403136 HAP1P54257 671 aaPredicted RBP17.12■□□□□ 0.33
CEACAM1-206ENST00000403136 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
CEACAM1-206ENST00000403136 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
CEACAM1-206ENST00000403136 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
CEACAM1-206ENST00000403136 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
CEACAM1-206ENST00000403136 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
CEACAM1-206ENST00000403136 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
CEACAM1-206ENST00000403136 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
CEACAM1-206ENST00000403136 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
CEACAM1-206ENST00000403136 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
CEACAM1-206ENST00000403136 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
CEACAM1-206ENST00000403136 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
CEACAM1-206ENST00000403136 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
CEACAM1-206ENST00000403136 COL18A1P39060 1754 aa17.09■□□□□ 0.33
CEACAM1-206ENST00000403136 CRYBG1Q9Y4K1 1723 aa17.09■□□□□ 0.33
CEACAM1-206ENST00000403136 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
CEACAM1-206ENST00000403136 ABCC6O95255 1503 aa17.09■□□□□ 0.33
CEACAM1-206ENST00000403136 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.33
CEACAM1-206ENST00000403136 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.33
CEACAM1-206ENST00000403136 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.33
CEACAM1-206ENST00000403136 BRPF1P55201 1214 aaPredicted RBP17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
CEACAM1-206ENST00000403136 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
CEACAM1-206ENST00000403136 TOM1O60784 492 aa17.06■□□□□ 0.32
CEACAM1-206ENST00000403136 MS4A1P11836 297 aa17.06■□□□□ 0.32
CEACAM1-206ENST00000403136 BABAM1Q9NWV8 329 aa17.06■□□□□ 0.32
CEACAM1-206ENST00000403136 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
CEACAM1-206ENST00000403136 IPO8O15397 1037 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 TNNQ9UQP3 1299 aa17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
CEACAM1-206ENST00000403136 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 RLBP1P12271 317 aa17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
CEACAM1-206ENST00000403136 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
CEACAM1-206ENST00000403136 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
CEACAM1-206ENST00000403136 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
CEACAM1-206ENST00000403136 DZIP1LQ8IYY4 767 aaKnown RBP17.03■□□□□ 0.32
CEACAM1-206ENST00000403136 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
CEACAM1-206ENST00000403136 AHDC1Q5TGY3 1603 aaPredicted RBP17.03■□□□□ 0.32
CEACAM1-206ENST00000403136 TRIM27P14373 513 aa17.02■□□□□ 0.32
CEACAM1-206ENST00000403136 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
CEACAM1-206ENST00000403136 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.31
CEACAM1-206ENST00000403136 SPG7Q9UQ90 795 aa17.02■□□□□ 0.31
CEACAM1-206ENST00000403136 EVA1CP58658 441 aa17.01■□□□□ 0.31
CEACAM1-206ENST00000403136 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
CEACAM1-206ENST00000403136 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
CEACAM1-206ENST00000403136 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
CEACAM1-206ENST00000403136 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
CEACAM1-206ENST00000403136 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
CEACAM1-206ENST00000403136 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
CEACAM1-206ENST00000403136 PIP4K2BP78356 416 aa17■□□□□ 0.31
CEACAM1-206ENST00000403136 TEFQ10587 303 aa17■□□□□ 0.31
CEACAM1-206ENST00000403136 AAMPQ13685 434 aa17■□□□□ 0.31
CEACAM1-206ENST00000403136 CARD10Q9BWT7 1032 aa16.99■□□□□ 0.31
CEACAM1-206ENST00000403136 COL5A2P05997 1499 aaPredicted RBP16.98■□□□□ 0.31
CEACAM1-206ENST00000403136 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
CEACAM1-206ENST00000403136 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
CEACAM1-206ENST00000403136 LRRC37A3O60309 1634 aa16.98■□□□□ 0.31
CEACAM1-206ENST00000403136 PHKG2P15735 406 aa16.97■□□□□ 0.31
CEACAM1-206ENST00000403136 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
CEACAM1-206ENST00000403136 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
CEACAM1-206ENST00000403136 MEGF6O75095 1541 aa16.97■□□□□ 0.31
CEACAM1-206ENST00000403136 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
CEACAM1-206ENST00000403136 LARP1Q6PKG0 1096 aaKnown RBP16.97■□□□□ 0.31
CEACAM1-206ENST00000403136 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
CEACAM1-206ENST00000403136 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
CEACAM1-206ENST00000403136 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
CEACAM1-206ENST00000403136 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
CEACAM1-206ENST00000403136 OVOS2A0A0G2JMS6 1433 aa16.95■□□□□ 0.3
CEACAM1-206ENST00000403136 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
CEACAM1-206ENST00000403136 CYP27B1O15528 508 aa16.94■□□□□ 0.3
CEACAM1-206ENST00000403136 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
CEACAM1-206ENST00000403136 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
CEACAM1-206ENST00000403136 DDX19BQ9UMR2 479 aa16.94■□□□□ 0.3
CEACAM1-206ENST00000403136 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
CEACAM1-206ENST00000403136 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
CEACAM1-206ENST00000403136 IL2RBP14784 551 aa16.93■□□□□ 0.3
CEACAM1-206ENST00000403136 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
CEACAM1-206ENST00000403136 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
CEACAM1-206ENST00000403136 KCNQ3O43525 872 aa16.92■□□□□ 0.3
CEACAM1-206ENST00000403136 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
CEACAM1-206ENST00000403136 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
CEACAM1-206ENST00000403136 DCAF5Q96JK2 942 aa16.92■□□□□ 0.3
CEACAM1-206ENST00000403136 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms