RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
PTCHD3P3-201ENST00000403073 TNS2Q63HR2 1409 aa23.04■■□□□ 1.28
PTCHD3P3-201ENST00000403073 FAM196AQ6ZSG2 479 aa23.03■■□□□ 1.28
PTCHD3P3-201ENST00000403073 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
PTCHD3P3-201ENST00000403073 SOCS7O14512 581 aa23.02■■□□□ 1.28
PTCHD3P3-201ENST00000403073 KDRP35968 1356 aa23.01■■□□□ 1.27
PTCHD3P3-201ENST00000403073 U2AF1L5P0DN76 240 aaPredicted RBP23.01■■□□□ 1.27
PTCHD3P3-201ENST00000403073 U2AF1Q01081 240 aaKnown RBP eCLIP23.01■■□□□ 1.27
PTCHD3P3-201ENST00000403073 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.27
PTCHD3P3-201ENST00000403073 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
PTCHD3P3-201ENST00000403073 RGPD1P0DJD0 1748 aa23■■□□□ 1.27
PTCHD3P3-201ENST00000403073 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
PTCHD3P3-201ENST00000403073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.98■■□□□ 1.27
PTCHD3P3-201ENST00000403073 CYP27B1O15528 508 aa22.97■■□□□ 1.27
PTCHD3P3-201ENST00000403073 TRIM37O94972 964 aa22.96■■□□□ 1.27
PTCHD3P3-201ENST00000403073 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
PTCHD3P3-201ENST00000403073 PCDH11XQ9BZA7 1347 aa22.96■■□□□ 1.27
PTCHD3P3-201ENST00000403073 PCDH11YQ9BZA8 1340 aa22.96■■□□□ 1.27
PTCHD3P3-201ENST00000403073 AMOTQ4VCS5 1084 aa22.95■■□□□ 1.26
PTCHD3P3-201ENST00000403073 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
PTCHD3P3-201ENST00000403073 PRKAR2BP31323 418 aa22.94■■□□□ 1.26
PTCHD3P3-201ENST00000403073 ACSBG1Q96GR2 724 aa22.94■■□□□ 1.26
PTCHD3P3-201ENST00000403073 FCHSD2O94868 740 aa22.93■■□□□ 1.26
PTCHD3P3-201ENST00000403073 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
PTCHD3P3-201ENST00000403073 PTF1AQ7RTS3 328 aa22.93■■□□□ 1.26
PTCHD3P3-201ENST00000403073 PHKG2P15735 406 aa22.92■■□□□ 1.26
PTCHD3P3-201ENST00000403073 MTHFSDQ2M296 383 aaKnown RBP22.92■■□□□ 1.26
PTCHD3P3-201ENST00000403073 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
PTCHD3P3-201ENST00000403073 BCL9O00512 1426 aa22.91■■□□□ 1.26
PTCHD3P3-201ENST00000403073 PLEKHG2Q9H7P9 1386 aa22.91■■□□□ 1.26
PTCHD3P3-201ENST00000403073 KCNQ2O43526 872 aa22.91■■□□□ 1.26
PTCHD3P3-201ENST00000403073 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
PTCHD3P3-201ENST00000403073 PHACTR3Q96KR7 559 aa22.91■■□□□ 1.26
PTCHD3P3-201ENST00000403073 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
PTCHD3P3-201ENST00000403073 SF3B2Q13435 895 aaKnown RBP22.89■■□□□ 1.25
PTCHD3P3-201ENST00000403073 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.25
PTCHD3P3-201ENST00000403073 PRIM1P49642 420 aaKnown RBP22.88■■□□□ 1.25
PTCHD3P3-201ENST00000403073 WDR43Q15061 677 aaKnown RBP eCLIP22.88■■□□□ 1.25
PTCHD3P3-201ENST00000403073 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
PTCHD3P3-201ENST00000403073 BCL11BQ9C0K0 894 aaPredicted RBP22.88■■□□□ 1.25
PTCHD3P3-201ENST00000403073 SHANK3Q9BYB0 1731 aa22.88■■□□□ 1.25
PTCHD3P3-201ENST00000403073 SYTL4Q96C24 671 aaPredicted RBP22.87■■□□□ 1.25
PTCHD3P3-201ENST00000403073 MRS2Q9HD23 443 aa22.87■■□□□ 1.25
PTCHD3P3-201ENST00000403073 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
PTCHD3P3-201ENST00000403073 PKD1L3Q7Z443 1732 aa22.87■■□□□ 1.25
PTCHD3P3-201ENST00000403073 APBA3O96018 575 aa22.86■■□□□ 1.25
PTCHD3P3-201ENST00000403073 PLEKHF1Q96S99 279 aa22.86■■□□□ 1.25
PTCHD3P3-201ENST00000403073 DEFB132Q7Z7B7 95 aa22.85■■□□□ 1.25
PTCHD3P3-201ENST00000403073 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
PTCHD3P3-201ENST00000403073 MPRIPQ6WCQ1 1025 aa22.84■■□□□ 1.25
PTCHD3P3-201ENST00000403073 EP400Q96L91 3159 aa22.83■■□□□ 1.25
PTCHD3P3-201ENST00000403073 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
PTCHD3P3-201ENST00000403073 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
PTCHD3P3-201ENST00000403073 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
PTCHD3P3-201ENST00000403073 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
PTCHD3P3-201ENST00000403073 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
PTCHD3P3-201ENST00000403073 NEFMP07197 916 aa22.81■■□□□ 1.24
PTCHD3P3-201ENST00000403073 BAG6P46379 1132 aa22.81■■□□□ 1.24
PTCHD3P3-201ENST00000403073 EN1Q05925 392 aaPredicted RBP22.81■■□□□ 1.24
PTCHD3P3-201ENST00000403073 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
PTCHD3P3-201ENST00000403073 LGR6Q9HBX8 967 aa22.81■■□□□ 1.24
PTCHD3P3-201ENST00000403073 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
PTCHD3P3-201ENST00000403073 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
PTCHD3P3-201ENST00000403073 GNAT3A8MTJ3 354 aa22.78■■□□□ 1.24
PTCHD3P3-201ENST00000403073 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.24
PTCHD3P3-201ENST00000403073 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
PTCHD3P3-201ENST00000403073 EZH2Q15910 746 aaKnown RBP22.77■■□□□ 1.24
PTCHD3P3-201ENST00000403073 PIGBQ92521 554 aa22.77■■□□□ 1.24
PTCHD3P3-201ENST00000403073 CAMKK2Q96RR4 588 aa22.77■■□□□ 1.24
PTCHD3P3-201ENST00000403073 MIER1Q8N108 512 aa22.76■■□□□ 1.23
PTCHD3P3-201ENST00000403073 RUNDC1Q96C34 613 aa22.76■■□□□ 1.23
PTCHD3P3-201ENST00000403073 TMOD3Q9NYL9 352 aa22.76■■□□□ 1.23
PTCHD3P3-201ENST00000403073 MAP3K5Q99683 1374 aa22.76■■□□□ 1.23
PTCHD3P3-201ENST00000403073 PLSCR1O15162 318 aa22.75■■□□□ 1.23
PTCHD3P3-201ENST00000403073 CABP4P57796 275 aa22.75■■□□□ 1.23
PTCHD3P3-201ENST00000403073 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
PTCHD3P3-201ENST00000403073 IL17REQ8NFR9 667 aa22.75■■□□□ 1.23
PTCHD3P3-201ENST00000403073 SBF2Q86WG5 1849 aa22.75■■□□□ 1.23
PTCHD3P3-201ENST00000403073 NHSQ6T4R5 1651 aa22.74■■□□□ 1.23
PTCHD3P3-201ENST00000403073 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
PTCHD3P3-201ENST00000403073 DOT1LQ8TEK3 1739 aa22.74■■□□□ 1.23
PTCHD3P3-201ENST00000403073 TNS1Q9HBL0 1735 aaKnown RBP22.74■■□□□ 1.23
PTCHD3P3-201ENST00000403073 TOGARAM1Q9Y4F4 1720 aa22.72■■□□□ 1.23
PTCHD3P3-201ENST00000403073 DCTN1Q14203 1278 aa22.72■■□□□ 1.23
PTCHD3P3-201ENST00000403073 MCM10Q7L590 875 aa22.72■■□□□ 1.23
PTCHD3P3-201ENST00000403073 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
PTCHD3P3-201ENST00000403073 PROM2Q8N271 834 aa22.72■■□□□ 1.23
PTCHD3P3-201ENST00000403073 RRP7AQ9Y3A4 280 aaKnown RBP22.72■■□□□ 1.23
PTCHD3P3-201ENST00000403073 CCER2I3L3R5 266 aa22.71■■□□□ 1.23
PTCHD3P3-201ENST00000403073 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
PTCHD3P3-201ENST00000403073 RTF1Q92541 710 aaKnown RBP22.71■■□□□ 1.23
PTCHD3P3-201ENST00000403073 SLC52A2Q9HAB3 445 aa22.71■■□□□ 1.23
PTCHD3P3-201ENST00000403073 RIPK4P57078 832 aa22.7■■□□□ 1.22
PTCHD3P3-201ENST00000403073 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
PTCHD3P3-201ENST00000403073 ATG3Q9NT62 314 aa22.7■■□□□ 1.22
PTCHD3P3-201ENST00000403073 ASAP1Q9ULH1 1129 aa22.7■■□□□ 1.22
PTCHD3P3-201ENST00000403073 HTATSF1O43719 755 aaKnown RBP22.69■■□□□ 1.22
PTCHD3P3-201ENST00000403073 TXNRD1Q16881 649 aa22.69■■□□□ 1.22
PTCHD3P3-201ENST00000403073 APAF1O14727 1248 aa22.68■■□□□ 1.22
PTCHD3P3-201ENST00000403073 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms