RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 NLGN2Q8NFZ4 835 aa20.54■□□□□ 0.88
VAMP1-203ENST00000400911 TESK2Q96S53 571 aa20.54■□□□□ 0.88
VAMP1-203ENST00000400911 ST20-MTHFSA0A0A6YYL1 179 aa20.53■□□□□ 0.88
VAMP1-203ENST00000400911 CCNL1Q9UK58 526 aaPredicted RBP20.53■□□□□ 0.88
VAMP1-203ENST00000400911 NSD2O96028 1365 aa20.53■□□□□ 0.88
VAMP1-203ENST00000400911 LTN1O94822 1766 aa20.52■□□□□ 0.88
VAMP1-203ENST00000400911 TONSLQ96HA7 1378 aa20.51■□□□□ 0.87
VAMP1-203ENST00000400911 MSH5O43196 834 aa20.51■□□□□ 0.87
VAMP1-203ENST00000400911 RRS1Q15050 365 aaKnown RBP20.51■□□□□ 0.87
VAMP1-203ENST00000400911 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
VAMP1-203ENST00000400911 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
VAMP1-203ENST00000400911 COL23A1Q86Y22 540 aaPredicted RBP20.5■□□□□ 0.87
VAMP1-203ENST00000400911 USHBP1Q8N6Y0 703 aa20.49■□□□□ 0.87
VAMP1-203ENST00000400911 MEGF6O75095 1541 aa20.48■□□□□ 0.87
VAMP1-203ENST00000400911 USP47Q96K76 1375 aa20.47■□□□□ 0.87
VAMP1-203ENST00000400911 FYB1O15117 783 aa20.46■□□□□ 0.87
VAMP1-203ENST00000400911 GIGYF1O75420 1035 aaPredicted RBP20.46■□□□□ 0.87
VAMP1-203ENST00000400911 YBX3P16989 372 aaKnown RBP eCLIP20.46■□□□□ 0.87
VAMP1-203ENST00000400911 MSL1Q68DK7 614 aa20.46■□□□□ 0.87
VAMP1-203ENST00000400911 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
VAMP1-203ENST00000400911 GGNBP2Q9H3C7 697 aa20.46■□□□□ 0.87
VAMP1-203ENST00000400911 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
VAMP1-203ENST00000400911 CGNL1Q0VF96 1302 aa20.45■□□□□ 0.86
VAMP1-203ENST00000400911 GRIN3BO60391 1043 aa20.44■□□□□ 0.86
VAMP1-203ENST00000400911 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
VAMP1-203ENST00000400911 RTL1A6NKG5 1358 aa20.43■□□□□ 0.86
VAMP1-203ENST00000400911 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
VAMP1-203ENST00000400911 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
VAMP1-203ENST00000400911 FAM208AQ9UK61 1670 aaKnown RBP20.41■□□□□ 0.86
VAMP1-203ENST00000400911 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
VAMP1-203ENST00000400911 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.86
VAMP1-203ENST00000400911 SMG6Q86US8 1419 aaKnown RBP20.39■□□□□ 0.85
VAMP1-203ENST00000400911 PCDH11XQ9BZA7 1347 aa20.38■□□□□ 0.85
VAMP1-203ENST00000400911 PCDH11YQ9BZA8 1340 aa20.38■□□□□ 0.85
VAMP1-203ENST00000400911 TMF1P82094 1093 aa20.38■□□□□ 0.85
VAMP1-203ENST00000400911 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
VAMP1-203ENST00000400911 CHD4Q14839 1912 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 INSRP06213 1382 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 PALLDQ8WX93 1383 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 QSER1Q2KHR3 1735 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 CYP27B1O15528 508 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 CD2APQ9Y5K6 639 aa20.37■□□□□ 0.85
VAMP1-203ENST00000400911 COL24A1Q17RW2 1714 aa20.36■□□□□ 0.85
VAMP1-203ENST00000400911 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
VAMP1-203ENST00000400911 AMIGO3Q86WK7 504 aa20.35■□□□□ 0.85
VAMP1-203ENST00000400911 LY75O60449 1722 aa20.35■□□□□ 0.85
VAMP1-203ENST00000400911 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
VAMP1-203ENST00000400911 FLT4P35916 1363 aa20.34■□□□□ 0.85
VAMP1-203ENST00000400911 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.85
VAMP1-203ENST00000400911 PIGBQ92521 554 aa20.33■□□□□ 0.85
VAMP1-203ENST00000400911 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
VAMP1-203ENST00000400911 AK7Q96M32 723 aa20.33■□□□□ 0.85
VAMP1-203ENST00000400911 TUBGCP6Q96RT7 1819 aa20.32■□□□□ 0.84
VAMP1-203ENST00000400911 PHF14O94880 888 aa20.32■□□□□ 0.84
VAMP1-203ENST00000400911 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
VAMP1-203ENST00000400911 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
VAMP1-203ENST00000400911 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
VAMP1-203ENST00000400911 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
VAMP1-203ENST00000400911 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
VAMP1-203ENST00000400911 KIF24Q5T7B8 1368 aa20.3■□□□□ 0.84
VAMP1-203ENST00000400911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.29■□□□□ 0.84
VAMP1-203ENST00000400911 NKX1-1Q15270 411 aaPredicted RBP20.29■□□□□ 0.84
VAMP1-203ENST00000400911 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
VAMP1-203ENST00000400911 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
VAMP1-203ENST00000400911 ZNF526Q8TF50 670 aaPredicted RBP20.28■□□□□ 0.84
VAMP1-203ENST00000400911 GPBP1L1Q9HC44 474 aaPredicted RBP20.28■□□□□ 0.84
VAMP1-203ENST00000400911 SPG7Q9UQ90 795 aa20.27■□□□□ 0.84
VAMP1-203ENST00000400911 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
VAMP1-203ENST00000400911 SIK1P57059 783 aa20.26■□□□□ 0.83
VAMP1-203ENST00000400911 LINC00116Q8NCU8 138 aa20.26■□□□□ 0.83
VAMP1-203ENST00000400911 SSFA2P28290 1259 aa20.25■□□□□ 0.83
VAMP1-203ENST00000400911 IGSF1Q8N6C5 1336 aa20.25■□□□□ 0.83
VAMP1-203ENST00000400911 EYA1Q99502 592 aa20.24■□□□□ 0.83
VAMP1-203ENST00000400911 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
VAMP1-203ENST00000400911 C5P01031 1676 aa20.23■□□□□ 0.83
VAMP1-203ENST00000400911 ITPK1Q13572 414 aa20.23■□□□□ 0.83
VAMP1-203ENST00000400911 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
VAMP1-203ENST00000400911 TMOD3Q9NYL9 352 aa20.23■□□□□ 0.83
VAMP1-203ENST00000400911 WASHC2AQ641Q2 1341 aa20.23■□□□□ 0.83
VAMP1-203ENST00000400911 GNPATO15228 680 aa20.22■□□□□ 0.83
VAMP1-203ENST00000400911 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
VAMP1-203ENST00000400911 ADCY9O60503 1353 aa20.21■□□□□ 0.83
VAMP1-203ENST00000400911 ATP6V1AP38606 617 aa20.21■□□□□ 0.83
VAMP1-203ENST00000400911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
VAMP1-203ENST00000400911 C4BP0C0L5 1744 aa20.21■□□□□ 0.83
VAMP1-203ENST00000400911 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
VAMP1-203ENST00000400911 PHKG2P15735 406 aa20.2■□□□□ 0.82
VAMP1-203ENST00000400911 IFNL2Q8IZJ0 200 aa20.2■□□□□ 0.82
VAMP1-203ENST00000400911 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
VAMP1-203ENST00000400911 POLKQ9UBT6 870 aa20.19■□□□□ 0.82
VAMP1-203ENST00000400911 HSPA6P17066 643 aa20.18■□□□□ 0.82
VAMP1-203ENST00000400911 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
VAMP1-203ENST00000400911 MMP10P09238 476 aa20.17■□□□□ 0.82
VAMP1-203ENST00000400911 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
VAMP1-203ENST00000400911 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
VAMP1-203ENST00000400911 TRAPPC3LQ5T215 181 aa20.14■□□□□ 0.81
VAMP1-203ENST00000400911 KIF3CO14782 793 aa20.13■□□□□ 0.81
VAMP1-203ENST00000400911 SLC4A9Q96Q91 983 aa20.13■□□□□ 0.81
VAMP1-203ENST00000400911 RTCBQ9Y3I0 505 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms