RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 ITSN2Q9NZM3 1697 aa10.43□□□□□ -0.74
RETREG1-202ENST00000399793 CDK13Q14004 1512 aaKnown RBP10.43□□□□□ -0.74
RETREG1-202ENST00000399793 UHRF1BP1LA0JNW5 1464 aa10.43□□□□□ -0.74
RETREG1-202ENST00000399793 NPHP1O15259 732 aa10.43□□□□□ -0.74
RETREG1-202ENST00000399793 TCP11L2Q8N4U5 519 aa10.43□□□□□ -0.74
RETREG1-202ENST00000399793 LAMC1P11047 1609 aa10.43□□□□□ -0.74
RETREG1-202ENST00000399793 ST5P78524 1137 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 SRLQ86TD4 932 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 EGFL6Q8IUX8 553 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 GOLGA6L1Q8N7Z2 621 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.42□□□□□ -0.74
RETREG1-202ENST00000399793 ADGBQ8N7X0 1667 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 ATF7IPQ6VMQ6 1270 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 SMARCE1Q969G3 411 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 PHF23Q9BUL5 403 aaPredicted RBP10.42□□□□□ -0.74
RETREG1-202ENST00000399793 RRP15Q9Y3B9 282 aaKnown RBP10.42□□□□□ -0.74
RETREG1-202ENST00000399793 PLB1Q6P1J6 1458 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 CCDC141Q6ZP82 1450 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 A0A1B0GUL7 405 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 TMED8Q6PL24 325 aaPredicted RBP10.42□□□□□ -0.74
RETREG1-202ENST00000399793 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
RETREG1-202ENST00000399793 ERBB3P21860 1342 aa10.42□□□□□ -0.74
RETREG1-202ENST00000399793 PNMA6AP0CW24 399 aaPredicted RBP10.41□□□□□ -0.74
RETREG1-202ENST00000399793 FUCA2Q9BTY2 467 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 CWC15Q9P013 229 aaKnown RBP10.41□□□□□ -0.74
RETREG1-202ENST00000399793 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
RETREG1-202ENST00000399793 ATP2B1P20020 1258 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 PACS2Q86VP3 889 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 RUNDC1Q96C34 613 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 NRBP1Q9UHY1 535 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 EXOC6BQ9Y2D4 811 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 ANKRD50Q9ULJ7 1429 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 ABCC10Q5T3U5 1492 aa10.41□□□□□ -0.74
RETREG1-202ENST00000399793 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
RETREG1-202ENST00000399793 TTC31Q49AM3 519 aaPredicted RBP10.4□□□□□ -0.74
RETREG1-202ENST00000399793 GIMAP6Q6P9H5 292 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
RETREG1-202ENST00000399793 KANK1Q14678 1352 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 GSPT1P15170 499 aaKnown RBP10.4□□□□□ -0.74
RETREG1-202ENST00000399793 TPM4P67936 248 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 SATB1Q01826 763 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 GRIPAP1Q4V328 841 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 ZSCAN25Q6NSZ9 544 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 CNKSR2Q8WXI2 1034 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 TMX3Q96JJ7 454 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 CXorf56Q9H5V9 222 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
RETREG1-202ENST00000399793 CUL7Q14999 1698 aa10.4□□□□□ -0.74
RETREG1-202ENST00000399793 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.75
RETREG1-202ENST00000399793 CLCN6P51797 869 aa10.4□□□□□ -0.75
RETREG1-202ENST00000399793 SSH1Q8WYL5 1049 aa10.4□□□□□ -0.75
RETREG1-202ENST00000399793 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 SYNMO15061 1565 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 CFAP65Q6ZU64 1925 aaKnown RBP10.39□□□□□ -0.75
RETREG1-202ENST00000399793 SLU7O95391 586 aaKnown RBP10.39□□□□□ -0.75
RETREG1-202ENST00000399793 E2F4Q16254 413 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 DEF6Q9H4E7 631 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 GPS2Q13227 327 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 DNAJC21Q5F1R6 531 aaKnown RBP10.39□□□□□ -0.75
RETREG1-202ENST00000399793 GCC1Q96CN9 775 aa10.39□□□□□ -0.75
RETREG1-202ENST00000399793 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
RETREG1-202ENST00000399793 RNF20Q5VTR2 975 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 FBXO18Q8NFZ0 1043 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 PLEKHG2Q9H7P9 1386 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 ERCC6LQ2NKX8 1250 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 TSR2Q969E8 191 aaKnown RBP10.38□□□□□ -0.75
RETREG1-202ENST00000399793 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 NOM1Q5C9Z4 860 aaKnown RBP10.38□□□□□ -0.75
RETREG1-202ENST00000399793 CCDC91Q7Z6B0 441 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 ZCCHC17Q9NP64 241 aaKnown RBP10.38□□□□□ -0.75
RETREG1-202ENST00000399793 SUFUQ9UMX1 484 aa10.38□□□□□ -0.75
RETREG1-202ENST00000399793 SPAG9O60271 1321 aaKnown RBP10.37□□□□□ -0.75
RETREG1-202ENST00000399793 ADGRL2O95490 1459 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 USP27XA6NNY8 438 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 PTPN14Q15678 1187 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 CEP120Q8N960 986 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 GOLGA5Q8TBA6 731 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
RETREG1-202ENST00000399793 PPIP5K1Q6PFW1 1433 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 MAGEA9P43362 315 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 EXOSC9Q06265 439 aaKnown RBP10.37□□□□□ -0.75
RETREG1-202ENST00000399793 TMEM87AQ8NBN3 555 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 CNPY2Q9Y2B0 182 aa10.37□□□□□ -0.75
RETREG1-202ENST00000399793 NEK4P51957 841 aa10.36□□□□□ -0.75
RETREG1-202ENST00000399793 GSCP56915 257 aaPredicted RBP10.36□□□□□ -0.75
RETREG1-202ENST00000399793 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
RETREG1-202ENST00000399793 ATP10AO60312 1499 aa10.36□□□□□ -0.75
RETREG1-202ENST00000399793 ZRANB2O95218 330 aaKnown RBP eCLIP10.36□□□□□ -0.75
RETREG1-202ENST00000399793 CT47B1P0C2W7 299 aaPredicted RBP10.36□□□□□ -0.75
RETREG1-202ENST00000399793 NYAP1Q6ZVC0 841 aa10.36□□□□□ -0.75
RETREG1-202ENST00000399793 POLR3AO14802 1390 aaPredicted RBP10.36□□□□□ -0.75
RETREG1-202ENST00000399793 A2MP01023 1474 aa10.36□□□□□ -0.75
RETREG1-202ENST00000399793 CCDC171Q6TFL3 1326 aa10.36□□□□□ -0.75
RETREG1-202ENST00000399793 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
RETREG1-202ENST00000399793 TDO2P48775 406 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms