RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 MYL6BP14649 208 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 NUTM2AQ8IVF1 878 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 CCDC113Q9H0I3 377 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 FYCO1Q9BQS8 1478 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 ARHGAP29Q52LW3 1261 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 GBP3Q9H0R5 595 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 PROSER2Q86WR7 435 aaPredicted RBP14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 SCLT1Q96NL6 688 aa14.41□□□□□ -0.1
CACNA1C-219ENST00000399649 TCP11L2Q8N4U5 519 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 SCAPERQ9BY12 1400 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 CUX1P39880 1505 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 CASQ1P31415 396 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 PPM1EQ8WY54 764 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 SEC63Q9UGP8 760 aaKnown RBP14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 MYOM3Q5VTT5 1437 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 KRT32Q14532 448 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 CRACR2AQ9BSW2 395 aa14.4□□□□□ -0.1
CACNA1C-219ENST00000399649 CCDC150Q8NCX0 1101 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 ERICH4A6NGS2 130 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 ARHGAP5Q13017 1502 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 MYZAPP0CAP1 466 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 TOM1L2Q6ZVM7 507 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 MAP9Q49MG5 647 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 MCM3P25205 808 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 CCDC178Q5BJE1 867 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 FKBP15Q5T1M5 1219 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 DDX54Q8TDD1 881 aaKnown RBP14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
CACNA1C-219ENST00000399649 LRP2BPQ9P2M1 347 aa14.38□□□□□ -0.11
CACNA1C-219ENST00000399649 MPNDQ8N594 471 aa14.38□□□□□ -0.11
CACNA1C-219ENST00000399649 TMCO3Q6UWJ1 677 aa14.38□□□□□ -0.11
CACNA1C-219ENST00000399649 IGHMBP2P38935 993 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 CFAP100Q494V2 611 aa14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 ZNF287Q9HBT7 754 aa14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 ZNF428Q96B54 188 aa14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 GRIPAP1Q4V328 841 aa14.37□□□□□ -0.11
CACNA1C-219ENST00000399649 IFFO1Q0D2I5 559 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 VPS36Q86VN1 386 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 UBXN4Q92575 508 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 PIP4K2BP78356 416 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 PDE3AQ14432 1141 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 FILIP1Q7Z7B0 1213 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 TXNDC2Q86VQ3 553 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
CACNA1C-219ENST00000399649 ANKRD18BA2A2Z9 1011 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 GSTTP1A0A1W2PQM5 241 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 ZSCAN12O43309 604 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 LARP1Q6PKG0 1096 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 KIF5CO60282 957 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 FGFR1OPO95684 399 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 MAP3K11Q16584 847 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 CTNNBL1Q8WYA6 563 aaPredicted RBP14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 PPP2R1AP30153 589 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
CACNA1C-219ENST00000399649 CHD1LQ86WJ1 897 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 SMC1AQ14683 1233 aaKnown RBP14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 ZNF530Q6P9A1 599 aaPredicted RBP14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 CHMP4BP1P59074 171 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 UBE4AQ14139 1066 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 CEP126Q9P2H0 1117 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 BCCIPQ9P287 314 aaKnown RBP eCLIP14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 KIF2AO00139 706 aaPredicted RBP14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 FGD5Q6ZNL6 1462 aa14.34□□□□□ -0.11
CACNA1C-219ENST00000399649 TSR2Q969E8 191 aaKnown RBP14.33□□□□□ -0.11
CACNA1C-219ENST00000399649 COMMD10Q9Y6G5 202 aa14.33□□□□□ -0.11
CACNA1C-219ENST00000399649 POLR3DP05423 398 aaPredicted RBP14.33□□□□□ -0.11
CACNA1C-219ENST00000399649 MICALCLQ6ZW33 695 aa14.33□□□□□ -0.11
CACNA1C-219ENST00000399649 FEZ1Q99689 392 aa14.33□□□□□ -0.11
CACNA1C-219ENST00000399649 SULT6B1Q6IMI4 303 aa14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 PDCL2Q8N4E4 241 aa14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 CUL5Q93034 780 aa14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 IDH1O75874 414 aaKnown RBP14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
CACNA1C-219ENST00000399649 TICAM2Q86XR7 235 aa14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 CRACR2BQ8N4Y2 399 aaPredicted RBP14.32□□□□□ -0.12
CACNA1C-219ENST00000399649 TMEM87AQ8NBN3 555 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms