RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 TDO2P48775 406 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 DUSP27Q5VZP5 1158 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 SSBP05455 408 aaKnown RBP eCLIP15.56■□□□□ 0.08
ITSN1-208ENST00000399349 BICDL1Q6ZP65 573 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 PPFIBP1Q86W92 1011 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 CCDC112Q8NEF3 446 aa15.56■□□□□ 0.08
ITSN1-208ENST00000399349 TANGO6Q9C0B7 1094 aa15.55■□□□□ 0.08
ITSN1-208ENST00000399349 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
ITSN1-208ENST00000399349 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
ITSN1-208ENST00000399349 CCDC83Q8IWF9 413 aa15.55■□□□□ 0.08
ITSN1-208ENST00000399349 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
ITSN1-208ENST00000399349 NUP62CLQ9H1M0 184 aa15.55■□□□□ 0.08
ITSN1-208ENST00000399349 MTERF4Q7Z6M4 381 aaKnown RBP15.55■□□□□ 0.08
ITSN1-208ENST00000399349 USHBP1Q8N6Y0 703 aa15.55■□□□□ 0.08
ITSN1-208ENST00000399349 ZNHIT6Q9NWK9 470 aaKnown RBP15.54■□□□□ 0.08
ITSN1-208ENST00000399349 ABCF2Q9UG63 623 aa15.54■□□□□ 0.08
ITSN1-208ENST00000399349 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
ITSN1-208ENST00000399349 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
ITSN1-208ENST00000399349 RARSP54136 660 aaKnown RBP15.54■□□□□ 0.08
ITSN1-208ENST00000399349 LARP6Q9BRS8 491 aaKnown RBP15.54■□□□□ 0.08
ITSN1-208ENST00000399349 DEF6Q9H4E7 631 aa15.54■□□□□ 0.08
ITSN1-208ENST00000399349 ERCC4Q92889 916 aaPredicted RBP15.54■□□□□ 0.08
ITSN1-208ENST00000399349 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
ITSN1-208ENST00000399349 RAI14Q9P0K7 980 aa15.54■□□□□ 0.08
ITSN1-208ENST00000399349 NESP48681 1621 aa15.53■□□□□ 0.08
ITSN1-208ENST00000399349 PRPF40BQ6NWY9 871 aaKnown RBP15.53■□□□□ 0.08
ITSN1-208ENST00000399349 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
ITSN1-208ENST00000399349 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
ITSN1-208ENST00000399349 LRP2BPQ9P2M1 347 aa15.52■□□□□ 0.08
ITSN1-208ENST00000399349 MX1P20591 662 aa15.52■□□□□ 0.08
ITSN1-208ENST00000399349 TSPYL1Q9H0U9 437 aa15.52■□□□□ 0.08
ITSN1-208ENST00000399349 GNAT3A8MTJ3 354 aa15.52■□□□□ 0.07
ITSN1-208ENST00000399349 DAPK1P53355 1430 aa15.52■□□□□ 0.07
ITSN1-208ENST00000399349 UQCRHLA0A096LP55 91 aa15.52■□□□□ 0.07
ITSN1-208ENST00000399349 UQCRHP07919 91 aa15.52■□□□□ 0.07
ITSN1-208ENST00000399349 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.07
ITSN1-208ENST00000399349 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.07
ITSN1-208ENST00000399349 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
ITSN1-208ENST00000399349 SYCP1Q15431 976 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 NME9Q86XW9 330 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 PDCL3Q9H2J4 239 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 CFAP45Q9UL16 551 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
ITSN1-208ENST00000399349 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
ITSN1-208ENST00000399349 SOGA3Q5TF21 947 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 CCDC82Q8N4S0 544 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 CCP110O43303 1012 aa15.51■□□□□ 0.07
ITSN1-208ENST00000399349 ZSCAN31Q96LW9 406 aaPredicted RBP15.5■□□□□ 0.07
ITSN1-208ENST00000399349 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
ITSN1-208ENST00000399349 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
ITSN1-208ENST00000399349 GUCY1B3Q02153 619 aa15.5■□□□□ 0.07
ITSN1-208ENST00000399349 STIM1Q13586 685 aa15.5■□□□□ 0.07
ITSN1-208ENST00000399349 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
ITSN1-208ENST00000399349 CCDC8Q9H0W5 538 aaPredicted RBP15.49■□□□□ 0.07
ITSN1-208ENST00000399349 KIF1BPQ96EK5 621 aa15.49■□□□□ 0.07
ITSN1-208ENST00000399349 CENPHQ9H3R5 247 aa15.49■□□□□ 0.07
ITSN1-208ENST00000399349 CTNNA3Q9UI47 895 aa15.49■□□□□ 0.07
ITSN1-208ENST00000399349 NAIPQ13075 1403 aa15.49■□□□□ 0.07
ITSN1-208ENST00000399349 TAF7Q15545 349 aaPredicted RBP15.49■□□□□ 0.07
ITSN1-208ENST00000399349 ZSCAN25Q6NSZ9 544 aa15.49■□□□□ 0.07
ITSN1-208ENST00000399349 DHX37Q8IY37 1157 aaKnown RBP15.49■□□□□ 0.07
ITSN1-208ENST00000399349 AIDAQ96BJ3 306 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 CFAP100Q494V2 611 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 CCDC181Q5TID7 509 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 KRT32Q14532 448 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 GDPD2Q9HCC8 539 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 NOL7Q9UMY1 257 aaKnown RBP15.48■□□□□ 0.07
ITSN1-208ENST00000399349 MAP3K11Q16584 847 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 METTL24Q5JXM2 366 aa15.48■□□□□ 0.07
ITSN1-208ENST00000399349 SSFA2P28290 1259 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 USP5P45974 858 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 FAM193AP78312 1265 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 DACH1Q9UI36 760 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 PPFIA3O75145 1194 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
ITSN1-208ENST00000399349 CDKL5O76039 1030 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 PAF1Q8N7H5 531 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 CWC15Q9P013 229 aaKnown RBP15.47■□□□□ 0.07
ITSN1-208ENST00000399349 NEFHP12036 1026 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 LRRFIP2Q9Y608 721 aaKnown RBP15.47■□□□□ 0.07
ITSN1-208ENST00000399349 MINDY4BA8MYZ0 360 aa15.47■□□□□ 0.07
ITSN1-208ENST00000399349 IMMTQ16891 758 aaKnown RBP15.46■□□□□ 0.07
ITSN1-208ENST00000399349 MPRIPQ6WCQ1 1025 aa15.46■□□□□ 0.07
ITSN1-208ENST00000399349 LEKR1Q6ZMV7 388 aa15.46■□□□□ 0.07
ITSN1-208ENST00000399349 MYD88Q99836 296 aa15.46■□□□□ 0.07
ITSN1-208ENST00000399349 SEPT11Q9NVA2 429 aaKnown RBP15.46■□□□□ 0.07
ITSN1-208ENST00000399349 DHX8Q14562 1220 aaKnown RBP15.46■□□□□ 0.07
ITSN1-208ENST00000399349 TBC1D2Q9BYX2 928 aa15.46■□□□□ 0.07
ITSN1-208ENST00000399349 RAB11FIP3O75154 756 aa15.46■□□□□ 0.06
ITSN1-208ENST00000399349 TRIM27P14373 513 aa15.46■□□□□ 0.06
ITSN1-208ENST00000399349 CDK13Q14004 1512 aaKnown RBP15.46■□□□□ 0.06
ITSN1-208ENST00000399349 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.06
ITSN1-208ENST00000399349 KLHL10Q6JEL2 608 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms