RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
ATL3-201ENST00000398868 GUCY1B3Q02153 619 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 NINLQ9Y2I6 1382 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 ZBTB9Q96C00 473 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 DEF6Q9H4E7 631 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 TMEM87AQ8NBN3 555 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 VAT1LQ9HCJ6 419 aa11.06□□□□□ -0.64
ATL3-201ENST00000398868 C6orf229H3BNL8 230 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 POLR3DP05423 398 aaPredicted RBP11.05□□□□□ -0.64
ATL3-201ENST00000398868 TMX1Q9H3N1 280 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 RRP9O43818 475 aaKnown RBP11.05□□□□□ -0.64
ATL3-201ENST00000398868 PHLDB1Q86UU1 1377 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 GNAI2P04899 355 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 GRPEL1Q9HAV7 217 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 JAG2Q9Y219 1238 aa11.05□□□□□ -0.64
ATL3-201ENST00000398868 UBA5Q9GZZ9 404 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 ERCC4Q92889 916 aaPredicted RBP11.04□□□□□ -0.64
ATL3-201ENST00000398868 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
ATL3-201ENST00000398868 CNTLNQ9NXG0 1405 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 ZMYND15Q9H091 742 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 ROCK1Q13464 1354 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 VTI1AQ96AJ9 217 aa11.04□□□□□ -0.64
ATL3-201ENST00000398868 MAGEC2Q9UBF1 373 aaPredicted RBP11.03□□□□□ -0.64
ATL3-201ENST00000398868 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
ATL3-201ENST00000398868 POLR3GO15318 223 aaPredicted RBP11.03□□□□□ -0.64
ATL3-201ENST00000398868 IGHMBP2P38935 993 aaKnown RBP11.03□□□□□ -0.64
ATL3-201ENST00000398868 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 RPGRQ92834 1020 aaKnown RBP11.03□□□□□ -0.64
ATL3-201ENST00000398868 F6X3S4 739 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 DNA2P51530 1060 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 SOGA3Q5TF21 947 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 GIMAP7Q8NHV1 300 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 CABLES1Q8TDN4 633 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 UBAP1LF5GYI3 381 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 ZBED9Q6R2W3 1325 aa11.03□□□□□ -0.64
ATL3-201ENST00000398868 RTEL1-TNFRSF6BF6WH68 1400 aa11.02□□□□□ -0.64
ATL3-201ENST00000398868 PPP2R1AP30153 589 aa11.02□□□□□ -0.64
ATL3-201ENST00000398868 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.641e-8■■■■■ 47.8
ATL3-201ENST00000398868 NAT10Q9H0A0 1025 aaKnown RBP11.02□□□□□ -0.64
ATL3-201ENST00000398868 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 CCDC112Q8NEF3 446 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 ANXA1P04083 346 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 BOLA2Q9H3K6 86 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 ATAD2BQ9ULI0 1458 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 STK38Q15208 465 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 ME1P48163 572 aa11.02□□□□□ -0.65
ATL3-201ENST00000398868 NEBLO76041 1014 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 PDCL2Q8N4E4 241 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 CCDC8Q9H0W5 538 aaPredicted RBP11.01□□□□□ -0.65
ATL3-201ENST00000398868 MKNK2Q9HBH9 465 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 CDC45O75419 566 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 SERPINC1P01008 464 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 PSMA5P28066 241 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 HSPA2P54652 639 aa11.01□□□□□ -0.65
ATL3-201ENST00000398868 DZIP1Q86YF9 867 aaKnown RBP11□□□□□ -0.65
ATL3-201ENST00000398868 RANBP6O60518 1105 aaKnown RBP11□□□□□ -0.65
ATL3-201ENST00000398868 LRRFIP2Q9Y608 721 aaKnown RBP11□□□□□ -0.65
ATL3-201ENST00000398868 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
ATL3-201ENST00000398868 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
ATL3-201ENST00000398868 UBAC1Q9BSL1 405 aa11□□□□□ -0.65
ATL3-201ENST00000398868 GOLGA6L10A6NI86 522 aa11□□□□□ -0.65
ATL3-201ENST00000398868 CAMK4Q16566 473 aa11□□□□□ -0.65
ATL3-201ENST00000398868 NME9Q86XW9 330 aa11□□□□□ -0.65
ATL3-201ENST00000398868 TRMT112Q9UI30 125 aaKnown RBP11□□□□□ -0.65
ATL3-201ENST00000398868 GOLGA6L10A0A0M3HER8 536 aa11□□□□□ -0.65
ATL3-201ENST00000398868 SEPT7Q16181 437 aaKnown RBP11□□□□□ -0.65
ATL3-201ENST00000398868 SNRKQ9NRH2 765 aa11□□□□□ -0.65
ATL3-201ENST00000398868 STARD3NLO95772 234 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 TXLNAP40222 546 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 TMOD2Q9NZR1 351 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 ANKRD50Q9ULJ7 1429 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 AIDAQ96BJ3 306 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 MMRN2Q9H8L6 949 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 JAKMIP1Q96N16 626 aaKnown RBP10.99□□□□□ -0.65
ATL3-201ENST00000398868 NACAP1Q9BZK3 213 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 ZNF408Q9H9D4 720 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 ERBINQ96RT1 1412 aa10.99□□□□□ -0.65
ATL3-201ENST00000398868 SRCIN1Q9C0H9 1055 aa10.98□□□□□ -0.65
ATL3-201ENST00000398868 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
ATL3-201ENST00000398868 ESPNB1AK53 854 aa10.98□□□□□ -0.65
ATL3-201ENST00000398868 KINO60870 393 aaKnown RBP10.98□□□□□ -0.65
ATL3-201ENST00000398868 HMGN5P82970 282 aaKnown RBP10.98□□□□□ -0.65
ATL3-201ENST00000398868 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
ATL3-201ENST00000398868 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
ATL3-201ENST00000398868 GNAI3P08754 354 aa10.98□□□□□ -0.65
ATL3-201ENST00000398868 CCDC181Q5TID7 509 aa10.98□□□□□ -0.65
ATL3-201ENST00000398868 DNAJC5BQ9UF47 199 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 RFC4P35249 363 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 ISM2Q6H9L7 571 aa10.97□□□□□ -0.65
ATL3-201ENST00000398868 KLHL10Q6JEL2 608 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms