RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 ABCA3Q99758 1704 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 C14orf37Q86TY3 774 aa9.43□□□□□ -0.9
RGPD1-201ENST00000398193 AMOTQ4VCS5 1084 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
RGPD1-201ENST00000398193 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
RGPD1-201ENST00000398193 SSH1Q8WYL5 1049 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 TSR2Q969E8 191 aaKnown RBP9.42□□□□□ -0.9
RGPD1-201ENST00000398193 ABCC4O15439 1325 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 SIPA1L3O60292 1781 aaPredicted RBP9.42□□□□□ -0.9
RGPD1-201ENST00000398193 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 GNAT3A8MTJ3 354 aa9.42□□□□□ -0.9
RGPD1-201ENST00000398193 FBLN1P23142 703 aa9.41□□□□□ -0.9
RGPD1-201ENST00000398193 CEMIPQ8WUJ3 1361 aa9.41□□□□□ -0.9
RGPD1-201ENST00000398193 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
RGPD1-201ENST00000398193 TWISTNBQ3B726 338 aaPredicted RBP9.41□□□□□ -0.9
RGPD1-201ENST00000398193 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
RGPD1-201ENST00000398193 HOXB7P09629 217 aa9.4□□□□□ -0.9
RGPD1-201ENST00000398193 CACNA1FO60840 1977 aa9.4□□□□□ -0.9
RGPD1-201ENST00000398193 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
RGPD1-201ENST00000398193 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
RGPD1-201ENST00000398193 TRIM27P14373 513 aa9.4□□□□□ -0.9
RGPD1-201ENST00000398193 MTHFSDQ2M296 383 aaKnown RBP9.4□□□□□ -0.9
RGPD1-201ENST00000398193 MRC1P22897 1456 aa9.4□□□□□ -0.9
RGPD1-201ENST00000398193 COL22A1Q8NFW1 1626 aaPredicted RBP9.4□□□□□ -0.91
RGPD1-201ENST00000398193 PANK1Q8TE04 598 aa9.39□□□□□ -0.91
RGPD1-201ENST00000398193 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
RGPD1-201ENST00000398193 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
RGPD1-201ENST00000398193 GCP02774 474 aa9.38□□□□□ -0.91
RGPD1-201ENST00000398193 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
RGPD1-201ENST00000398193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
RGPD1-201ENST00000398193 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
RGPD1-201ENST00000398193 EIF5BO60841 1220 aaKnown RBP9.38□□□□□ -0.91
RGPD1-201ENST00000398193 AKAP4Q5JQC9 854 aa9.38□□□□□ -0.91
RGPD1-201ENST00000398193 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
RGPD1-201ENST00000398193 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
RGPD1-201ENST00000398193 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
RGPD1-201ENST00000398193 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
RGPD1-201ENST00000398193 ORAI2Q96SN7 254 aa9.37□□□□□ -0.91
RGPD1-201ENST00000398193 BACH2Q9BYV9 841 aa9.37□□□□□ -0.91
RGPD1-201ENST00000398193 INTS3Q68E01 1043 aaKnown RBP9.37□□□□□ -0.91
RGPD1-201ENST00000398193 RLBP1P12271 317 aa9.37□□□□□ -0.91
RGPD1-201ENST00000398193 RGS12O14924 1447 aa9.36□□□□□ -0.91
RGPD1-201ENST00000398193 TAF7Q15545 349 aaPredicted RBP9.36□□□□□ -0.91
RGPD1-201ENST00000398193 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
RGPD1-201ENST00000398193 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
RGPD1-201ENST00000398193 SCN11AQ9UI33 1791 aa9.36□□□□□ -0.91
RGPD1-201ENST00000398193 PDE4AP27815 886 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 GCC1Q96CN9 775 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
RGPD1-201ENST00000398193 ITPRIPQ8IWB1 547 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
RGPD1-201ENST00000398193 TSPYL4Q9UJ04 414 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 CCDC30Q5VVM6 783 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 TMEM57Q8N5G2 664 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 ANKRD24Q8TF21 1146 aa9.35□□□□□ -0.91
RGPD1-201ENST00000398193 PAPPAQ13219 1627 aa9.34□□□□□ -0.91
RGPD1-201ENST00000398193 RGPD5Q99666 1765 aa9.34□□□□□ -0.91
RGPD1-201ENST00000398193 IGHDP01880 384 aa9.34□□□□□ -0.91
RGPD1-201ENST00000398193 CCT4P50991 539 aaKnown RBP9.34□□□□□ -0.91
RGPD1-201ENST00000398193 SMC5Q8IY18 1101 aa9.34□□□□□ -0.91
RGPD1-201ENST00000398193 FAM83GA6ND36 823 aa9.34□□□□□ -0.91
RGPD1-201ENST00000398193 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.91
RGPD1-201ENST00000398193 ANP32AP39687 249 aaKnown RBP9.34□□□□□ -0.91
RGPD1-201ENST00000398193 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
RGPD1-201ENST00000398193 COL14A1Q05707 1796 aaKnown RBP9.34□□□□□ -0.91
RGPD1-201ENST00000398193 FOXO3O43524 673 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 LAMB4A4D0S4 1761 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 ERBB3P21860 1342 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 NBPF6Q5VWK0 638 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 MCM10Q7L590 875 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 NBPF4Q96M43 638 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 TSPYL6Q8N831 410 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
RGPD1-201ENST00000398193 PCDHB15Q9Y5E8 787 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 HEG1Q9ULI3 1381 aa9.33□□□□□ -0.92
RGPD1-201ENST00000398193 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
RGPD1-201ENST00000398193 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
RGPD1-201ENST00000398193 C1orf141Q5JVX7 400 aa9.32□□□□□ -0.92
RGPD1-201ENST00000398193 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
RGPD1-201ENST00000398193 NUTM2GQ5VZR2 741 aa9.32□□□□□ -0.92
RGPD1-201ENST00000398193 BRINP3Q76B58 766 aa9.32□□□□□ -0.92
RGPD1-201ENST00000398193 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
RGPD1-201ENST00000398193 WNK3Q9BYP7 1800 aa9.31□□□□□ -0.92
RGPD1-201ENST00000398193 LRP6O75581 1613 aa9.31□□□□□ -0.92
RGPD1-201ENST00000398193 STK31Q9BXU1 1019 aa9.31□□□□□ -0.92
RGPD1-201ENST00000398193 RPAP2Q8IXW5 612 aaPredicted RBP9.31□□□□□ -0.92
RGPD1-201ENST00000398193 RNMTO43148 476 aaKnown RBP9.31□□□□□ -0.92
RGPD1-201ENST00000398193 IL17REQ8NFR9 667 aa9.31□□□□□ -0.92
RGPD1-201ENST00000398193 NUCB1Q02818 461 aa9.3□□□□□ -0.92
RGPD1-201ENST00000398193 DCTN1Q14203 1278 aa9.3□□□□□ -0.92
RGPD1-201ENST00000398193 SOX12O15370 315 aa9.3□□□□□ -0.92
RGPD1-201ENST00000398193 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
RGPD1-201ENST00000398193 LTBP4Q8N2S1 1624 aa9.29□□□□□ -0.92
RGPD1-201ENST00000398193 TATP17735 454 aaPredicted RBP9.29□□□□□ -0.92
RGPD1-201ENST00000398193 C8orf34Q49A92 452 aa9.29□□□□□ -0.92
RGPD1-201ENST00000398193 TNNQ9UQP3 1299 aa9.29□□□□□ -0.92
RGPD1-201ENST00000398193 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms