RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 FAM13BQ9NYF5 915 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 CTNNA2P26232 953 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 ME1P48163 572 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 BICD1Q96G01 975 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 ST5P78524 1137 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
RGPD2-201ENST00000398146 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
RGPD2-201ENST00000398146 SPTY2D1Q68D10 685 aaPredicted RBP13.23□□□□□ -0.29
RGPD2-201ENST00000398146 CCDC113Q9H0I3 377 aa13.23□□□□□ -0.29
RGPD2-201ENST00000398146 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
RGPD2-201ENST00000398146 LMOD1P29536 600 aaPredicted RBP13.23□□□□□ -0.29
RGPD2-201ENST00000398146 CEP57L1Q8IYX8 460 aa13.23□□□□□ -0.29
RGPD2-201ENST00000398146 CABP5Q9NP86 173 aa13.23□□□□□ -0.29
RGPD2-201ENST00000398146 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
RGPD2-201ENST00000398146 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
RGPD2-201ENST00000398146 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 CETN2P41208 172 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 DPH6Q7L8W6 267 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 GPTP24298 496 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 OTUD6BQ8N6M0 293 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 VEZTQ9HBM0 779 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 GNAI2P04899 355 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 DDX23Q9BUQ8 820 aaKnown RBP13.22□□□□□ -0.29
RGPD2-201ENST00000398146 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
RGPD2-201ENST00000398146 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
RGPD2-201ENST00000398146 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 SPC24Q8NBT2 197 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 USP8P40818 1118 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 EXOC5O00471 708 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 FIBPO43427 364 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 LMAN1P49257 510 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 ATP2B3Q16720 1220 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 TRMT112Q9UI30 125 aaKnown RBP13.21□□□□□ -0.29
RGPD2-201ENST00000398146 STAMBPO95630 424 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 DNA2P51530 1060 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
RGPD2-201ENST00000398146 CCDC91Q7Z6B0 441 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
RGPD2-201ENST00000398146 JMYQ8N9B5 988 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 KCNA4P22459 653 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 CDC45O75419 566 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 RRS1Q15050 365 aaKnown RBP13.2□□□□□ -0.3
RGPD2-201ENST00000398146 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
RGPD2-201ENST00000398146 IFIT1P09914 478 aaKnown RBP13.19□□□□□ -0.3
RGPD2-201ENST00000398146 TAF4BQ92750 862 aa13.19□□□□□ -0.3
RGPD2-201ENST00000398146 DACH1Q9UI36 760 aa13.19□□□□□ -0.3
RGPD2-201ENST00000398146 NLRP5P59047 1200 aa13.19□□□□□ -0.3
RGPD2-201ENST00000398146 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
RGPD2-201ENST00000398146 LARP1Q6PKG0 1096 aaKnown RBP13.19□□□□□ -0.3
RGPD2-201ENST00000398146 KIAA1328Q86T90 577 aa13.19□□□□□ -0.3
RGPD2-201ENST00000398146 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
RGPD2-201ENST00000398146 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
RGPD2-201ENST00000398146 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
RGPD2-201ENST00000398146 NOD1Q9Y239 953 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 GOLGA6L10A0A0M3HER8 536 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 NEK4P51957 841 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
RGPD2-201ENST00000398146 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 SH3BP5O60239 455 aa13.18□□□□□ -0.3
RGPD2-201ENST00000398146 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 MYD88Q99836 296 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 SPOUT1Q5T280 376 aaKnown RBP13.17□□□□□ -0.3
RGPD2-201ENST00000398146 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
RGPD2-201ENST00000398146 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 TIMELESSQ9UNS1 1208 aa13.17□□□□□ -0.3
RGPD2-201ENST00000398146 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
RGPD2-201ENST00000398146 SYNCQ9H7C4 482 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 CDKL5O76039 1030 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 CEP63Q96MT8 703 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 TSG101Q99816 390 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 NUCB2P80303 420 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 CCDC178Q5BJE1 867 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 CWC27Q6UX04 472 aaKnown RBP13.16□□□□□ -0.3
RGPD2-201ENST00000398146 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
RGPD2-201ENST00000398146 PICALMQ13492 652 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 OGFOD1Q8N543 542 aa13.16□□□□□ -0.3
RGPD2-201ENST00000398146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
RGPD2-201ENST00000398146 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.3
RGPD2-201ENST00000398146 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms