RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 IGHDP01880 384 aa10.64□□□□□ -0.71
TRPM1-202ENST00000397795 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
TRPM1-202ENST00000397795 SH2D4BQ5SQS7 431 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 LUC7L2Q9Y383 392 aaKnown RBP10.63□□□□□ -0.71
TRPM1-202ENST00000397795 ZWINTO95229 277 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 ADCY5O95622 1261 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 RFC1P35251 1148 aaPredicted RBP10.63□□□□□ -0.71
TRPM1-202ENST00000397795 SLFN5Q08AF3 891 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 ZNF397Q8NF99 534 aaPredicted RBP10.63□□□□□ -0.71
TRPM1-202ENST00000397795 ERC1Q8IUD2 1116 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
TRPM1-202ENST00000397795 CARMIL1Q5VZK9 1371 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 TACC1O75410 805 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
TRPM1-202ENST00000397795 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 PPP1R12BO60237 982 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-202ENST00000397795 SOGA3Q5TF21 947 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 C10orf67Q8IYJ2 551 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 NSRP1Q9H0G5 558 aaKnown RBP10.62□□□□□ -0.71
TRPM1-202ENST00000397795 RSPH14Q9UHP6 348 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 CASQ1P31415 396 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 RABGAP1Q9Y3P9 1069 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
TRPM1-202ENST00000397795 FAM177A1Q8N128 213 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC43Q96MW1 224 aaKnown RBP10.62□□□□□ -0.71
TRPM1-202ENST00000397795 ARHGAP29Q52LW3 1261 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC113Q9H0I3 377 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 TMEM51Q9NW97 253 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRPM1-202ENST00000397795 BRMS1Q9HCU9 246 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 ZNF396Q96N95 335 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-202ENST00000397795 ZNF830Q96NB3 372 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-202ENST00000397795 LMNTD2Q8IXW0 634 aa10.61□□□□□ -0.71
TRPM1-202ENST00000397795 SPAG9O60271 1321 aaKnown RBP10.61□□□□□ -0.71
TRPM1-202ENST00000397795 PDCP20941 246 aa10.6□□□□□ -0.71
TRPM1-202ENST00000397795 DBN1Q16643 649 aa10.6□□□□□ -0.71
TRPM1-202ENST00000397795 C16orf45Q96MC5 204 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 TTC12Q9H892 705 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
TRPM1-202ENST00000397795 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
TRPM1-202ENST00000397795 CLNS1AP54105 237 aaKnown RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 EPB41L2O43491 1005 aaKnown RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
TRPM1-202ENST00000397795 TSC1Q92574 1164 aa10.6□□□□□ -0.71
TRPM1-202ENST00000397795 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
TRPM1-202ENST00000397795 IRX5P78411 483 aaPredicted RBP10.59□□□□□ -0.71
TRPM1-202ENST00000397795 UBE4AQ14139 1066 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 TNMDQ9H2S6 317 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 IBTKQ9P2D0 1353 aaPredicted RBP10.59□□□□□ -0.71
TRPM1-202ENST00000397795 ZNF853P0CG23 659 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 TRDNQ13061 729 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 RPUSD2Q8IZ73 545 aaKnown RBP10.59□□□□□ -0.71
TRPM1-202ENST00000397795 KIF5CO60282 957 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC83Q8IWF9 413 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 CEP112Q8N8E3 955 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC183Q5T5S1 534 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 CCDC121Q6ZUS5 278 aa10.59□□□□□ -0.71
TRPM1-202ENST00000397795 NEMFO60524 1076 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 CCDC50Q8IVM0 306 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 STMN1P16949 149 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
TRPM1-202ENST00000397795 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.72
TRPM1-202ENST00000397795 XBP1P17861 261 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 DHX29Q7Z478 1369 aaKnown RBP10.58□□□□□ -0.72
TRPM1-202ENST00000397795 MAP2K2P36507 400 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 AMOTL1Q8IY63 956 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 ANKS4BQ8N8V4 417 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 EBAG9O00559 213 aa10.58□□□□□ -0.72
TRPM1-202ENST00000397795 GBP7Q8N8V2 638 aaPredicted RBP10.58□□□□□ -0.72
TRPM1-202ENST00000397795 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
TRPM1-202ENST00000397795 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRPM1-202ENST00000397795 HSP90AB4PQ58FF6 505 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 CEP57L1Q8IYX8 460 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 NEBLO76041 1014 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 STIM1Q13586 685 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
TRPM1-202ENST00000397795 SCLT1Q96NL6 688 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 CFDP1Q9UEE9 299 aaPredicted RBP10.57□□□□□ -0.72
TRPM1-202ENST00000397795 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
TRPM1-202ENST00000397795 ERICH2A1L162 156 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 MAP3K7CLP57077 242 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 CEP128Q6ZU80 1094 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 OTUD6BQ8N6M0 293 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 JMYQ8N9B5 988 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 RBBP5Q15291 538 aaKnown RBP10.57□□□□□ -0.72
TRPM1-202ENST00000397795 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 USH1CQ9Y6N9 552 aa10.57□□□□□ -0.72
TRPM1-202ENST00000397795 URI1O94763 535 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-202ENST00000397795 PSMA5P28066 241 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 FAM114A2Q9NRY5 505 aa10.56□□□□□ -0.72
TRPM1-202ENST00000397795 WHAMMP3Q1A5X7 153 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms