RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.73
MAP1LC3A-203ENST00000397709 RUNDC1Q96C34 613 aa25.83■■□□□ 1.73
MAP1LC3A-203ENST00000397709 CDCA7Q9BWT1 371 aaPredicted RBP25.82■■□□□ 1.72
MAP1LC3A-203ENST00000397709 THSD7AQ9UPZ6 1657 aa25.82■■□□□ 1.72
MAP1LC3A-203ENST00000397709 PHACTR3Q96KR7 559 aa25.81■■□□□ 1.72
MAP1LC3A-203ENST00000397709 LRRC37A3O60309 1634 aa25.79■■□□□ 1.72
MAP1LC3A-203ENST00000397709 FAM98CQ17RN3 349 aaKnown RBP25.79■■□□□ 1.72
MAP1LC3A-203ENST00000397709 MAPK8IP3Q9UPT6 1336 aa25.79■■□□□ 1.72
MAP1LC3A-203ENST00000397709 SHANK3Q9BYB0 1731 aa25.79■■□□□ 1.72
MAP1LC3A-203ENST00000397709 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
MAP1LC3A-203ENST00000397709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.78■■□□□ 1.72
MAP1LC3A-203ENST00000397709 ONECUT3O60422 494 aaPredicted RBP25.77■■□□□ 1.72
MAP1LC3A-203ENST00000397709 NEFMP07197 916 aa25.77■■□□□ 1.72
MAP1LC3A-203ENST00000397709 AMOTQ4VCS5 1084 aa25.77■■□□□ 1.72
MAP1LC3A-203ENST00000397709 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
MAP1LC3A-203ENST00000397709 MTHFSDQ2M296 383 aaKnown RBP25.76■■□□□ 1.71
MAP1LC3A-203ENST00000397709 POTEAQ6S8J7 498 aa25.76■■□□□ 1.71
MAP1LC3A-203ENST00000397709 TNS2Q63HR2 1409 aa25.76■■□□□ 1.71
MAP1LC3A-203ENST00000397709 GAS2L2Q8NHY3 880 aa25.74■■□□□ 1.71
MAP1LC3A-203ENST00000397709 ZCRB1Q8TBF4 217 aaKnown RBP25.74■■□□□ 1.71
MAP1LC3A-203ENST00000397709 SPG7Q9UQ90 795 aa25.74■■□□□ 1.71
MAP1LC3A-203ENST00000397709 APAF1O14727 1248 aa25.73■■□□□ 1.71
MAP1LC3A-203ENST00000397709 RXRBP28702 533 aa25.72■■□□□ 1.71
MAP1LC3A-203ENST00000397709 NFE2L2Q16236 605 aa25.72■■□□□ 1.71
MAP1LC3A-203ENST00000397709 TMPOP42166 694 aaKnown RBP25.71■■□□□ 1.71
MAP1LC3A-203ENST00000397709 DDB1Q16531 1140 aa25.71■■□□□ 1.71
MAP1LC3A-203ENST00000397709 DLG5Q8TDM6 1919 aa25.71■■□□□ 1.71
MAP1LC3A-203ENST00000397709 PCDH11XQ9BZA7 1347 aa25.7■■□□□ 1.71
MAP1LC3A-203ENST00000397709 PCDH11YQ9BZA8 1340 aa25.7■■□□□ 1.71
MAP1LC3A-203ENST00000397709 EXOC5O00471 708 aa25.7■■□□□ 1.7
MAP1LC3A-203ENST00000397709 ZNF530Q6P9A1 599 aaPredicted RBP25.7■■□□□ 1.7
MAP1LC3A-203ENST00000397709 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
MAP1LC3A-203ENST00000397709 CYP27B1O15528 508 aa25.68■■□□□ 1.7
MAP1LC3A-203ENST00000397709 RRP7AQ9Y3A4 280 aaKnown RBP25.68■■□□□ 1.7
MAP1LC3A-203ENST00000397709 A0A0G2JS52 829 aa25.67■■□□□ 1.7
MAP1LC3A-203ENST00000397709 PHKG2P15735 406 aa25.67■■□□□ 1.7
MAP1LC3A-203ENST00000397709 MYT1Q01538 1121 aa25.67■■□□□ 1.7
MAP1LC3A-203ENST00000397709 NCBP3Q53F19 620 aaKnown RBP25.67■■□□□ 1.7
MAP1LC3A-203ENST00000397709 AKAP4Q5JQC9 854 aa25.67■■□□□ 1.7
MAP1LC3A-203ENST00000397709 MAP3K5Q99683 1374 aa25.67■■□□□ 1.7
MAP1LC3A-203ENST00000397709 RGS12O14924 1447 aa25.66■■□□□ 1.7
MAP1LC3A-203ENST00000397709 IFNL2Q8IZJ0 200 aa25.66■■□□□ 1.7
MAP1LC3A-203ENST00000397709 RIPK4P57078 832 aa25.65■■□□□ 1.7
MAP1LC3A-203ENST00000397709 C1orf141Q5JVX7 400 aa25.65■■□□□ 1.7
MAP1LC3A-203ENST00000397709 BRWD3Q6RI45 1802 aa25.65■■□□□ 1.7
MAP1LC3A-203ENST00000397709 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.7
MAP1LC3A-203ENST00000397709 SENP3-EIF4A1A0A087X0R7 540 aa25.64■■□□□ 1.7
MAP1LC3A-203ENST00000397709 DDX54Q8TDD1 881 aaKnown RBP25.64■■□□□ 1.7
MAP1LC3A-203ENST00000397709 GNAT3A8MTJ3 354 aa25.63■■□□□ 1.69
MAP1LC3A-203ENST00000397709 NEUROD2Q15784 382 aa25.63■■□□□ 1.69
MAP1LC3A-203ENST00000397709 NGEFQ8N5V2 710 aa25.63■■□□□ 1.69
MAP1LC3A-203ENST00000397709 HTATSF1O43719 755 aaKnown RBP25.62■■□□□ 1.69
MAP1LC3A-203ENST00000397709 NKX1-1Q15270 411 aaPredicted RBP25.62■■□□□ 1.69
MAP1LC3A-203ENST00000397709 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
MAP1LC3A-203ENST00000397709 MARCH10Q8NA82 808 aaPredicted RBP25.62■■□□□ 1.69
MAP1LC3A-203ENST00000397709 TRIM35Q9UPQ4 493 aa25.62■■□□□ 1.69
MAP1LC3A-203ENST00000397709 VIRMAQ69YN4 1812 aaKnown RBP25.61■■□□□ 1.69
MAP1LC3A-203ENST00000397709 HSP90AB1P08238 724 aaKnown RBP25.61■■□□□ 1.69
MAP1LC3A-203ENST00000397709 HNRNPUQ00839 825 aaKnown RBP eCLIP25.61■■□□□ 1.69
MAP1LC3A-203ENST00000397709 LMOD3Q0VAK6 560 aa25.61■■□□□ 1.69
MAP1LC3A-203ENST00000397709 PDE3BQ13370 1112 aa25.61■■□□□ 1.69
MAP1LC3A-203ENST00000397709 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
MAP1LC3A-203ENST00000397709 SCN11AQ9UI33 1791 aa25.6■■□□□ 1.69
MAP1LC3A-203ENST00000397709 MPRIPQ6WCQ1 1025 aa25.58■■□□□ 1.69
MAP1LC3A-203ENST00000397709 SALL2Q9Y467 1007 aaPredicted RBP25.58■■□□□ 1.69
MAP1LC3A-203ENST00000397709 TOGARAM1Q9Y4F4 1720 aa25.57■■□□□ 1.68
MAP1LC3A-203ENST00000397709 RTF1Q92541 710 aaKnown RBP25.57■■□□□ 1.68
MAP1LC3A-203ENST00000397709 DCAF5Q96JK2 942 aa25.57■■□□□ 1.68
MAP1LC3A-203ENST00000397709 CEMIPQ8WUJ3 1361 aa25.56■■□□□ 1.68
MAP1LC3A-203ENST00000397709 RNMTO43148 476 aaKnown RBP25.56■■□□□ 1.68
MAP1LC3A-203ENST00000397709 KRT27Q7Z3Y8 459 aa25.56■■□□□ 1.68
MAP1LC3A-203ENST00000397709 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
MAP1LC3A-203ENST00000397709 ZNF521Q96K83 1311 aa25.56■■□□□ 1.68
MAP1LC3A-203ENST00000397709 BCL9O00512 1426 aa25.55■■□□□ 1.68
MAP1LC3A-203ENST00000397709 DCTN1Q14203 1278 aa25.55■■□□□ 1.68
MAP1LC3A-203ENST00000397709 MCM10Q7L590 875 aa25.55■■□□□ 1.68
MAP1LC3A-203ENST00000397709 WWC1Q8IX03 1113 aa25.55■■□□□ 1.68
MAP1LC3A-203ENST00000397709 LGR6Q9HBX8 967 aa25.55■■□□□ 1.68
MAP1LC3A-203ENST00000397709 MRC1P22897 1456 aa25.54■■□□□ 1.68
MAP1LC3A-203ENST00000397709 DOT1LQ8TEK3 1739 aa25.54■■□□□ 1.68
MAP1LC3A-203ENST00000397709 THUMPD2Q9BTF0 503 aaKnown RBP25.53■■□□□ 1.68
MAP1LC3A-203ENST00000397709 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
MAP1LC3A-203ENST00000397709 SIPA1L3O60292 1781 aaPredicted RBP25.51■■□□□ 1.67
MAP1LC3A-203ENST00000397709 YTHDC1Q96MU7 727 aaKnown RBP25.51■■□□□ 1.67
MAP1LC3A-203ENST00000397709 ERVV-2B6SEH9 535 aa25.5■■□□□ 1.67
MAP1LC3A-203ENST00000397709 FAM182BQ5T319 152 aa25.49■■□□□ 1.67
MAP1LC3A-203ENST00000397709 WDR63Q8IWG1 891 aa25.49■■□□□ 1.67
MAP1LC3A-203ENST00000397709 ITGB4P16144 1822 aa25.49■■□□□ 1.67
MAP1LC3A-203ENST00000397709 SBF2Q86WG5 1849 aa25.47■■□□□ 1.67
MAP1LC3A-203ENST00000397709 CALD1Q05682 793 aaKnown RBP25.47■■□□□ 1.67
MAP1LC3A-203ENST00000397709 SLC52A2Q9HAB3 445 aa25.47■■□□□ 1.67
MAP1LC3A-203ENST00000397709 NHSQ6T4R5 1651 aa25.47■■□□□ 1.67
MAP1LC3A-203ENST00000397709 IL16Q14005 1332 aa25.46■■□□□ 1.67
MAP1LC3A-203ENST00000397709 CABP4P57796 275 aa25.45■■□□□ 1.66
MAP1LC3A-203ENST00000397709 TEFQ10587 303 aa25.45■■□□□ 1.66
MAP1LC3A-203ENST00000397709 FAM196AQ6ZSG2 479 aa25.45■■□□□ 1.66
MAP1LC3A-203ENST00000397709 NFATC2IPQ8NCF5 419 aa25.43■■□□□ 1.66
MAP1LC3A-203ENST00000397709 ACSBG1Q96GR2 724 aa25.43■■□□□ 1.66
MAP1LC3A-203ENST00000397709 ZNF853P0CG23 659 aa25.42■■□□□ 1.66
MAP1LC3A-203ENST00000397709 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms