RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
MCF2L-209ENST00000397036 COL14A1Q05707 1796 aaKnown RBP17.7■□□□□ 0.42
MCF2L-209ENST00000397036 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
MCF2L-209ENST00000397036 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
MCF2L-209ENST00000397036 BTG4Q9NY30 223 aa17.7■□□□□ 0.42
MCF2L-209ENST00000397036 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
MCF2L-209ENST00000397036 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
MCF2L-209ENST00000397036 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
MCF2L-209ENST00000397036 CRB1P82279 1406 aa17.68■□□□□ 0.42
MCF2L-209ENST00000397036 CHL1O00533 1208 aa17.67■□□□□ 0.42
MCF2L-209ENST00000397036 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
MCF2L-209ENST00000397036 SPG7Q9UQ90 795 aa17.67■□□□□ 0.42
MCF2L-209ENST00000397036 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
MCF2L-209ENST00000397036 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
MCF2L-209ENST00000397036 CEMIPQ8WUJ3 1361 aa17.66■□□□□ 0.42
MCF2L-209ENST00000397036 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-209ENST00000397036 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
MCF2L-209ENST00000397036 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 HSPA1LP34931 641 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 MCM10Q7L590 875 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 ZNF428Q96B54 188 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
MCF2L-209ENST00000397036 STRN4Q9NRL3 753 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 DLG5Q8TDM6 1919 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 OVOS2A0A0G2JMS6 1433 aa17.65■□□□□ 0.42
MCF2L-209ENST00000397036 IL2RBP14784 551 aa17.64■□□□□ 0.41
MCF2L-209ENST00000397036 MEGF6O75095 1541 aa17.64■□□□□ 0.41
MCF2L-209ENST00000397036 SLIT2O94813 1529 aa17.64■□□□□ 0.41
MCF2L-209ENST00000397036 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-209ENST00000397036 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-209ENST00000397036 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-209ENST00000397036 THRAP3Q9Y2W1 955 aaKnown RBP17.63■□□□□ 0.41
MCF2L-209ENST00000397036 IFNL2Q8IZJ0 200 aa17.62■□□□□ 0.41
MCF2L-209ENST00000397036 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-209ENST00000397036 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
MCF2L-209ENST00000397036 NEFLP07196 543 aa17.62■□□□□ 0.41
MCF2L-209ENST00000397036 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
MCF2L-209ENST00000397036 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-209ENST00000397036 ERICH6BQ5W0A0 696 aa17.62■□□□□ 0.41
MCF2L-209ENST00000397036 TSR2Q969E8 191 aaKnown RBP17.62■□□□□ 0.41
MCF2L-209ENST00000397036 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-209ENST00000397036 GTF3C3Q9Y5Q9 886 aa17.62■□□□□ 0.41
MCF2L-209ENST00000397036 PHKG2P15735 406 aa17.61■□□□□ 0.41
MCF2L-209ENST00000397036 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
MCF2L-209ENST00000397036 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
MCF2L-209ENST00000397036 RNMTO43148 476 aaKnown RBP17.6■□□□□ 0.41
MCF2L-209ENST00000397036 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
MCF2L-209ENST00000397036 NKX1-1Q15270 411 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-209ENST00000397036 UNC5CLQ8IV45 518 aa17.59■□□□□ 0.41
MCF2L-209ENST00000397036 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
MCF2L-209ENST00000397036 SOS1Q07889 1333 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-209ENST00000397036 CYP27B1O15528 508 aa17.58■□□□□ 0.41
MCF2L-209ENST00000397036 RRP1P56182 461 aaKnown RBP17.58■□□□□ 0.41
MCF2L-209ENST00000397036 DCAF5Q96JK2 942 aa17.58■□□□□ 0.41
MCF2L-209ENST00000397036 LGR6Q9HBX8 967 aa17.58■□□□□ 0.41
MCF2L-209ENST00000397036 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.4
MCF2L-209ENST00000397036 DISP2A7MBM2 1401 aa17.58■□□□□ 0.4
MCF2L-209ENST00000397036 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
MCF2L-209ENST00000397036 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
MCF2L-209ENST00000397036 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
MCF2L-209ENST00000397036 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-209ENST00000397036 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 SPATA31A5Q5VU36 1347 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 SPATA31A7Q8IWB4 1347 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 VAMP4O75379 141 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 BRPF1P55201 1214 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-209ENST00000397036 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 MPRIPQ6WCQ1 1025 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
MCF2L-209ENST00000397036 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
MCF2L-209ENST00000397036 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
MCF2L-209ENST00000397036 TEFQ10587 303 aa17.56■□□□□ 0.4
MCF2L-209ENST00000397036 VPS72Q15906 364 aa17.56■□□□□ 0.4
MCF2L-209ENST00000397036 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
MCF2L-209ENST00000397036 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
MCF2L-209ENST00000397036 PARP4Q9UKK3 1724 aaKnown RBP17.54■□□□□ 0.4
MCF2L-209ENST00000397036 NRAPQ86VF7 1730 aa17.54■□□□□ 0.4
MCF2L-209ENST00000397036 LRP6O75581 1613 aa17.53■□□□□ 0.4
MCF2L-209ENST00000397036 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-209ENST00000397036 C8orf58Q8NAV2 365 aa17.53■□□□□ 0.4
MCF2L-209ENST00000397036 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
MCF2L-209ENST00000397036 ERVV-2B6SEH9 535 aa17.52■□□□□ 0.4
MCF2L-209ENST00000397036 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
MCF2L-209ENST00000397036 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.4
MCF2L-209ENST00000397036 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-209ENST00000397036 EXOC5O00471 708 aa17.52■□□□□ 0.39
MCF2L-209ENST00000397036 BCAR3O75815 825 aa17.52■□□□□ 0.39
MCF2L-209ENST00000397036 FKBP8Q14318 412 aa17.52■□□□□ 0.39
MCF2L-209ENST00000397036 TSPYL6Q8N831 410 aa17.52■□□□□ 0.39
MCF2L-209ENST00000397036 USP35Q9P2H5 1018 aa17.52■□□□□ 0.39
MCF2L-209ENST00000397036 HOXB7P09629 217 aa17.51■□□□□ 0.39
MCF2L-209ENST00000397036 BTBD11A6QL63 1104 aa17.5■□□□□ 0.39
MCF2L-209ENST00000397036 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
MCF2L-209ENST00000397036 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
MCF2L-209ENST00000397036 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
MCF2L-209ENST00000397036 USP21Q9UK80 565 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms