RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
TM9SF1-202ENST00000396854 PPP4R2Q9NY27 417 aa19.46■□□□□ 0.71
TM9SF1-202ENST00000396854 NFE2L2Q16236 605 aa19.45■□□□□ 0.7
TM9SF1-202ENST00000396854 SHANK3Q9BYB0 1731 aa19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 RAPGEF4Q8WZA2 1011 aa19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 OVOS2A0A0G2JMS6 1433 aa19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 DISP2A7MBM2 1401 aa19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
TM9SF1-202ENST00000396854 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
TM9SF1-202ENST00000396854 SPATA31A5Q5VU36 1347 aa19.43■□□□□ 0.7
TM9SF1-202ENST00000396854 SPATA31A7Q8IWB4 1347 aa19.43■□□□□ 0.7
TM9SF1-202ENST00000396854 GAS2L2Q8NHY3 880 aa19.43■□□□□ 0.7
TM9SF1-202ENST00000396854 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
TM9SF1-202ENST00000396854 USP21Q9UK80 565 aa19.43■□□□□ 0.7
TM9SF1-202ENST00000396854 AFF2P51816 1311 aa19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 VPS72Q15906 364 aa19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 MTHFSDQ2M296 383 aaKnown RBP19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 RRP7AQ9Y3A4 280 aaKnown RBP19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 THRAP3Q9Y2W1 955 aaKnown RBP19.42■□□□□ 0.7
TM9SF1-202ENST00000396854 IL2RBP14784 551 aa19.41■□□□□ 0.7
TM9SF1-202ENST00000396854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.7
TM9SF1-202ENST00000396854 RIPK4P57078 832 aa19.4■□□□□ 0.7
TM9SF1-202ENST00000396854 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
TM9SF1-202ENST00000396854 ATRNO75882 1429 aa19.4■□□□□ 0.7
TM9SF1-202ENST00000396854 NEUROD2Q15784 382 aa19.4■□□□□ 0.7
TM9SF1-202ENST00000396854 SALL2Q9Y467 1007 aaPredicted RBP19.4■□□□□ 0.7
TM9SF1-202ENST00000396854 USP35Q9P2H5 1018 aa19.39■□□□□ 0.69
TM9SF1-202ENST00000396854 TRIM35Q9UPQ4 493 aa19.39■□□□□ 0.69
TM9SF1-202ENST00000396854 ADAMTS7Q9UKP4 1686 aa19.39■□□□□ 0.69
TM9SF1-202ENST00000396854 LRRC37A3O60309 1634 aa19.39■□□□□ 0.69
TM9SF1-202ENST00000396854 GLI3P10071 1580 aa19.38■□□□□ 0.69
TM9SF1-202ENST00000396854 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
TM9SF1-202ENST00000396854 LMOD3Q0VAK6 560 aa19.37■□□□□ 0.69
TM9SF1-202ENST00000396854 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
TM9SF1-202ENST00000396854 CDCA7Q9BWT1 371 aaPredicted RBP19.37■□□□□ 0.69
TM9SF1-202ENST00000396854 SPG7Q9UQ90 795 aa19.37■□□□□ 0.69
TM9SF1-202ENST00000396854 MAP3K5Q99683 1374 aa19.37■□□□□ 0.69
TM9SF1-202ENST00000396854 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
TM9SF1-202ENST00000396854 SCN11AQ9UI33 1791 aa19.36■□□□□ 0.69
TM9SF1-202ENST00000396854 CCDC9Q9Y3X0 531 aaKnown RBP19.36■□□□□ 0.69
TM9SF1-202ENST00000396854 HTATSF1O43719 755 aaKnown RBP19.35■□□□□ 0.69
TM9SF1-202ENST00000396854 ZNF530Q6P9A1 599 aaPredicted RBP19.35■□□□□ 0.69
TM9SF1-202ENST00000396854 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
TM9SF1-202ENST00000396854 GNAT3A8MTJ3 354 aa19.34■□□□□ 0.69
TM9SF1-202ENST00000396854 AKAP4Q5JQC9 854 aa19.34■□□□□ 0.69
TM9SF1-202ENST00000396854 TNS2Q63HR2 1409 aa19.34■□□□□ 0.69
TM9SF1-202ENST00000396854 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
TM9SF1-202ENST00000396854 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
TM9SF1-202ENST00000396854 ZCRB1Q8TBF4 217 aaKnown RBP19.34■□□□□ 0.69
TM9SF1-202ENST00000396854 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.68
TM9SF1-202ENST00000396854 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.68
TM9SF1-202ENST00000396854 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
TM9SF1-202ENST00000396854 FANCIQ9NVI1 1328 aa19.32■□□□□ 0.68
TM9SF1-202ENST00000396854 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
TM9SF1-202ENST00000396854 C1orf141Q5JVX7 400 aa19.32■□□□□ 0.68
TM9SF1-202ENST00000396854 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
TM9SF1-202ENST00000396854 PHKG2P15735 406 aa19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 IFNL2Q8IZJ0 200 aa19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 CYP27B1O15528 508 aa19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 ZNF772Q68DY9 489 aaPredicted RBP19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 IL16Q14005 1332 aa19.31■□□□□ 0.68
TM9SF1-202ENST00000396854 CEMIPQ8WUJ3 1361 aa19.3■□□□□ 0.68
TM9SF1-202ENST00000396854 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
TM9SF1-202ENST00000396854 DCTN1Q14203 1278 aa19.29■□□□□ 0.68
TM9SF1-202ENST00000396854 QTRT2Q9H974 415 aaKnown RBP19.29■□□□□ 0.68
TM9SF1-202ENST00000396854 KDM6AO15550 1401 aaPredicted RBP19.29■□□□□ 0.68
TM9SF1-202ENST00000396854 FAM98CQ17RN3 349 aaKnown RBP19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 MCM10Q7L590 875 aa19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 EXOC5O00471 708 aa19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 THUMPD2Q9BTF0 503 aaKnown RBP19.28■□□□□ 0.68
TM9SF1-202ENST00000396854 MRC1P22897 1456 aa19.27■□□□□ 0.68
TM9SF1-202ENST00000396854 E9PSI1 815 aa19.27■□□□□ 0.68
TM9SF1-202ENST00000396854 SLFN5Q08AF3 891 aa19.27■□□□□ 0.68
TM9SF1-202ENST00000396854 DDB1Q16531 1140 aa19.27■□□□□ 0.68
TM9SF1-202ENST00000396854 ONECUT3O60422 494 aaPredicted RBP19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 NKX1-1Q15270 411 aaPredicted RBP19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 RNMTO43148 476 aaKnown RBP19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 ILDR1Q86SU0 546 aaPredicted RBP19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 TRMT2AQ8IZ69 625 aaKnown RBP19.26■□□□□ 0.67
TM9SF1-202ENST00000396854 MPRIPQ6WCQ1 1025 aa19.25■□□□□ 0.67
TM9SF1-202ENST00000396854 DCAF5Q96JK2 942 aa19.25■□□□□ 0.67
TM9SF1-202ENST00000396854 KDM3BQ7LBC6 1761 aa19.25■□□□□ 0.67
TM9SF1-202ENST00000396854 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
TM9SF1-202ENST00000396854 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
TM9SF1-202ENST00000396854 ZNF853P0CG23 659 aa19.24■□□□□ 0.67
TM9SF1-202ENST00000396854 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
TM9SF1-202ENST00000396854 ITGB4P16144 1822 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms