RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 VPS72Q15906 364 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 TOM1L2Q6ZVM7 507 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 NLRP2Q9NX02 1062 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 SPG7Q9UQ90 795 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 HMOX1P09601 288 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 BCL9LQ86UU0 1499 aa11.58□□□□□ -0.56
CCR9-203ENST00000395963 HSP90AB1P08238 724 aaKnown RBP11.57□□□□□ -0.56
CCR9-203ENST00000395963 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
CCR9-203ENST00000395963 MAP3K5Q99683 1374 aa11.57□□□□□ -0.56
CCR9-203ENST00000395963 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
CCR9-203ENST00000395963 SPATA31A1Q5TZJ5 1347 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 IL2RBP14784 551 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 ATRNO75882 1429 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 MEGF6O75095 1541 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 TNS2Q63HR2 1409 aa11.56□□□□□ -0.56
CCR9-203ENST00000395963 PCDH11XQ9BZA7 1347 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 PCDH11YQ9BZA8 1340 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
CCR9-203ENST00000395963 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
CCR9-203ENST00000395963 E9PSI1 815 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 MEX3CQ5U5Q3 659 aaKnown RBP11.55□□□□□ -0.56
CCR9-203ENST00000395963 NUTM2AQ8IVF1 878 aaPredicted RBP11.55□□□□□ -0.56
CCR9-203ENST00000395963 MRC1P22897 1456 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 RIPK4P57078 832 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 THSD7AQ9UPZ6 1657 aa11.55□□□□□ -0.56
CCR9-203ENST00000395963 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
CCR9-203ENST00000395963 LARP1Q6PKG0 1096 aaKnown RBP11.54□□□□□ -0.56
CCR9-203ENST00000395963 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
CCR9-203ENST00000395963 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
CCR9-203ENST00000395963 SOS1Q07889 1333 aaPredicted RBP11.54□□□□□ -0.56
CCR9-203ENST00000395963 CT47B1P0C2W7 299 aaPredicted RBP11.53□□□□□ -0.56
CCR9-203ENST00000395963 MTHFSDQ2M296 383 aaKnown RBP11.53□□□□□ -0.56
CCR9-203ENST00000395963 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
CCR9-203ENST00000395963 PHACTR3Q96KR7 559 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
CCR9-203ENST00000395963 ZNF772Q68DY9 489 aaPredicted RBP11.53□□□□□ -0.56
CCR9-203ENST00000395963 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 STRN4Q9NRL3 753 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 USP21Q9UK80 565 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
CCR9-203ENST00000395963 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.56
CCR9-203ENST00000395963 PLEKHG5O94827 1062 aa11.52□□□□□ -0.56
CCR9-203ENST00000395963 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.56
CCR9-203ENST00000395963 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.56
CCR9-203ENST00000395963 C8orf37Q96NL8 207 aa11.52□□□□□ -0.56
CCR9-203ENST00000395963 IFT57Q9NWB7 429 aa11.52□□□□□ -0.56
CCR9-203ENST00000395963 BCL9O00512 1426 aa11.52□□□□□ -0.57
CCR9-203ENST00000395963 GNAI1P63096 354 aa11.52□□□□□ -0.57
CCR9-203ENST00000395963 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
CCR9-203ENST00000395963 AFF2P51816 1311 aa11.51□□□□□ -0.57
CCR9-203ENST00000395963 ZNF530Q6P9A1 599 aaPredicted RBP11.51□□□□□ -0.57
CCR9-203ENST00000395963 USHBP1Q8N6Y0 703 aa11.51□□□□□ -0.57
CCR9-203ENST00000395963 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
CCR9-203ENST00000395963 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
CCR9-203ENST00000395963 GLI3P10071 1580 aa11.5□□□□□ -0.57
CCR9-203ENST00000395963 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
CCR9-203ENST00000395963 ZNF428Q96B54 188 aa11.5□□□□□ -0.57
CCR9-203ENST00000395963 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
CCR9-203ENST00000395963 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
CCR9-203ENST00000395963 PHKG2P15735 406 aa11.5□□□□□ -0.57
CCR9-203ENST00000395963 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
CCR9-203ENST00000395963 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
CCR9-203ENST00000395963 ZNF853P0CG23 659 aa11.49□□□□□ -0.57
CCR9-203ENST00000395963 KDM3BQ7LBC6 1761 aa11.48□□□□□ -0.57
CCR9-203ENST00000395963 ERVV-2B6SEH9 535 aa11.48□□□□□ -0.57
CCR9-203ENST00000395963 EXOC5O00471 708 aa11.48□□□□□ -0.57
CCR9-203ENST00000395963 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
CCR9-203ENST00000395963 PAPPAQ13219 1627 aa11.47□□□□□ -0.57
CCR9-203ENST00000395963 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.57
CCR9-203ENST00000395963 DDB1Q16531 1140 aa11.46□□□□□ -0.57
CCR9-203ENST00000395963 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
CCR9-203ENST00000395963 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
CCR9-203ENST00000395963 KDM6AO15550 1401 aaPredicted RBP11.46□□□□□ -0.57
CCR9-203ENST00000395963 CHL1O00533 1208 aa11.46□□□□□ -0.58
CCR9-203ENST00000395963 NEUROD2Q15784 382 aa11.46□□□□□ -0.58
CCR9-203ENST00000395963 HOXB7P09629 217 aa11.45□□□□□ -0.58
CCR9-203ENST00000395963 TAF7Q15545 349 aaPredicted RBP11.45□□□□□ -0.58
CCR9-203ENST00000395963 CICQ96RK0 1608 aaPredicted RBP11.45□□□□□ -0.58
CCR9-203ENST00000395963 CYP27B1O15528 508 aa11.45□□□□□ -0.58
CCR9-203ENST00000395963 TEFQ10587 303 aa11.45□□□□□ -0.58
CCR9-203ENST00000395963 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
CCR9-203ENST00000395963 RBM6P78332 1123 aaKnown RBP11.44□□□□□ -0.58
CCR9-203ENST00000395963 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
CCR9-203ENST00000395963 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
CCR9-203ENST00000395963 HMGB2P26583 209 aaKnown RBP11.44□□□□□ -0.58
CCR9-203ENST00000395963 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
CCR9-203ENST00000395963 SLC52A2Q9HAB3 445 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms