RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 COL24A1Q17RW2 1714 aa9.83□□□□□ -0.84
XCR1-202ENST00000395946 TESK2Q96S53 571 aa9.83□□□□□ -0.84
XCR1-202ENST00000395946 MAP3K19Q56UN5 1328 aa9.82□□□□□ -0.84
XCR1-202ENST00000395946 HOXC9P31274 260 aa9.82□□□□□ -0.84
XCR1-202ENST00000395946 CDCA8Q53HL2 280 aa9.82□□□□□ -0.84
XCR1-202ENST00000395946 ZNF784Q8NCA9 323 aaPredicted RBP9.82□□□□□ -0.84
XCR1-202ENST00000395946 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
XCR1-202ENST00000395946 NSD2O96028 1365 aa9.82□□□□□ -0.84
XCR1-202ENST00000395946 PLEKHG2Q9H7P9 1386 aa9.82□□□□□ -0.84
XCR1-202ENST00000395946 AMPHP49418 695 aa9.81□□□□□ -0.84
XCR1-202ENST00000395946 ZNF827Q17R98 1081 aa9.81□□□□□ -0.84
XCR1-202ENST00000395946 ZCRB1Q8TBF4 217 aaKnown RBP9.81□□□□□ -0.84
XCR1-202ENST00000395946 PNPLA7Q6ZV29 1317 aa9.81□□□□□ -0.84
XCR1-202ENST00000395946 USP47Q96K76 1375 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 LY75O60449 1722 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 TMF1P82094 1093 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 FLAD1Q8NFF5 587 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 DDX54Q8TDD1 881 aaKnown RBP9.8□□□□□ -0.84
XCR1-202ENST00000395946 MEGF6O75095 1541 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 NSD3Q9BZ95 1437 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 PCDH11XQ9BZA7 1347 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 PCDH11YQ9BZA8 1340 aa9.8□□□□□ -0.84
XCR1-202ENST00000395946 DOT1LQ8TEK3 1739 aa9.79□□□□□ -0.84
XCR1-202ENST00000395946 INSRP06213 1382 aa9.79□□□□□ -0.84
XCR1-202ENST00000395946 FLT4P35916 1363 aa9.79□□□□□ -0.84
XCR1-202ENST00000395946 ST20-MTHFSA0A0A6YYL1 179 aa9.79□□□□□ -0.84
XCR1-202ENST00000395946 RAPGEF4Q8WZA2 1011 aa9.79□□□□□ -0.84
XCR1-202ENST00000395946 TFCP2L1Q9NZI6 479 aa9.79□□□□□ -0.84
XCR1-202ENST00000395946 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
XCR1-202ENST00000395946 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
XCR1-202ENST00000395946 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
XCR1-202ENST00000395946 SHANK3Q9BYB0 1731 aa9.78□□□□□ -0.84
XCR1-202ENST00000395946 CHD4Q14839 1912 aa9.78□□□□□ -0.84
XCR1-202ENST00000395946 NCAPD2Q15021 1401 aa9.77□□□□□ -0.85
XCR1-202ENST00000395946 TATP17735 454 aaPredicted RBP9.77□□□□□ -0.85
XCR1-202ENST00000395946 GPR162Q16538 588 aa9.77□□□□□ -0.85
XCR1-202ENST00000395946 SYTL4Q96C24 671 aaPredicted RBP9.77□□□□□ -0.85
XCR1-202ENST00000395946 UTRNP46939 3433 aa9.76□□□□□ -0.85
XCR1-202ENST00000395946 FYB1O15117 783 aa9.76□□□□□ -0.85
XCR1-202ENST00000395946 C1QTNF8P60827 252 aa9.76□□□□□ -0.85
XCR1-202ENST00000395946 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
XCR1-202ENST00000395946 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
XCR1-202ENST00000395946 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
XCR1-202ENST00000395946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.75□□□□□ -0.85
XCR1-202ENST00000395946 CD2APQ9Y5K6 639 aa9.75□□□□□ -0.85
XCR1-202ENST00000395946 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
XCR1-202ENST00000395946 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
XCR1-202ENST00000395946 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
XCR1-202ENST00000395946 PKD1L3Q7Z443 1732 aa9.73□□□□□ -0.85
XCR1-202ENST00000395946 TUBGCP6Q96RT7 1819 aa9.73□□□□□ -0.85
XCR1-202ENST00000395946 GIGYF1O75420 1035 aaPredicted RBP9.73□□□□□ -0.85
XCR1-202ENST00000395946 RRS1Q15050 365 aaKnown RBP9.73□□□□□ -0.85
XCR1-202ENST00000395946 C5P01031 1676 aa9.73□□□□□ -0.85
XCR1-202ENST00000395946 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
XCR1-202ENST00000395946 KIF20BQ96Q89 1820 aa9.72□□□□□ -0.85
XCR1-202ENST00000395946 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
XCR1-202ENST00000395946 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
XCR1-202ENST00000395946 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
XCR1-202ENST00000395946 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
XCR1-202ENST00000395946 CLSPNQ9HAW4 1339 aa9.72□□□□□ -0.85
XCR1-202ENST00000395946 SENP3-EIF4A1A0A087X0R7 540 aa9.71□□□□□ -0.86
XCR1-202ENST00000395946 SSFA2P28290 1259 aa9.71□□□□□ -0.86
XCR1-202ENST00000395946 HSP90AB2PQ58FF8 381 aa9.71□□□□□ -0.86
XCR1-202ENST00000395946 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
XCR1-202ENST00000395946 NLGN2Q8NFZ4 835 aa9.7□□□□□ -0.86
XCR1-202ENST00000395946 AK7Q96M32 723 aa9.7□□□□□ -0.86
XCR1-202ENST00000395946 RNF39Q9H2S5 420 aa9.7□□□□□ -0.86
XCR1-202ENST00000395946 WASHC2AQ641Q2 1341 aa9.7□□□□□ -0.86
XCR1-202ENST00000395946 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
XCR1-202ENST00000395946 CYP27B1O15528 508 aa9.69□□□□□ -0.86
XCR1-202ENST00000395946 ADCY9O60503 1353 aa9.69□□□□□ -0.86
XCR1-202ENST00000395946 RGPD2P0DJD1 1756 aa9.69□□□□□ -0.86
XCR1-202ENST00000395946 FBLN1P23142 703 aa9.68□□□□□ -0.86
XCR1-202ENST00000395946 KCNQ4P56696 695 aa9.68□□□□□ -0.86
XCR1-202ENST00000395946 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
XCR1-202ENST00000395946 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
XCR1-202ENST00000395946 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
XCR1-202ENST00000395946 TAF1LQ8IZX4 1826 aa9.68□□□□□ -0.86
XCR1-202ENST00000395946 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
XCR1-202ENST00000395946 ZNF831Q5JPB2 1677 aa9.67□□□□□ -0.86
XCR1-202ENST00000395946 KAT6BQ8WYB5 2073 aa9.67□□□□□ -0.86
XCR1-202ENST00000395946 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
XCR1-202ENST00000395946 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
XCR1-202ENST00000395946 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
XCR1-202ENST00000395946 CICQ96RK0 1608 aaPredicted RBP9.67□□□□□ -0.86
XCR1-202ENST00000395946 ATP10DQ9P241 1426 aa9.66□□□□□ -0.86
XCR1-202ENST00000395946 LOC102724428A0A0B4J2F2 783 aa9.66□□□□□ -0.86
XCR1-202ENST00000395946 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
XCR1-202ENST00000395946 SIK1P57059 783 aa9.66□□□□□ -0.86
XCR1-202ENST00000395946 PIGBQ92521 554 aa9.66□□□□□ -0.86
XCR1-202ENST00000395946 CARD14Q9BXL6 1004 aa9.66□□□□□ -0.86
XCR1-202ENST00000395946 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
XCR1-202ENST00000395946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.65□□□□□ -0.86
XCR1-202ENST00000395946 PHKG2P15735 406 aa9.65□□□□□ -0.86
XCR1-202ENST00000395946 TRIM26Q12899 539 aaPredicted RBP9.65□□□□□ -0.86
XCR1-202ENST00000395946 UBR3Q6ZT12 1888 aa9.65□□□□□ -0.86
XCR1-202ENST00000395946 MAP2P11137 1827 aaKnown RBP9.65□□□□□ -0.86
XCR1-202ENST00000395946 KDRP35968 1356 aa9.64□□□□□ -0.87
XCR1-202ENST00000395946 IGSF1Q8N6C5 1336 aa9.64□□□□□ -0.87
XCR1-202ENST00000395946 ITGB4P16144 1822 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms