RNA–Protein interactions for RNA: ENST00000395936.5

PMP22-202, Transcript of peripheral myelin protein 22, humanhuman

TSL 3 BASIC

Gene PMP22, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-202ENST00000395936 PRIM1P49642 420 aaKnown RBP23.53■■□□□ 1.36
PMP22-202ENST00000395936 HSP90AB2PQ58FF8 381 aa23.53■■□□□ 1.36
PMP22-202ENST00000395936 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
PMP22-202ENST00000395936 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
PMP22-202ENST00000395936 KIF20BQ96Q89 1820 aa23.53■■□□□ 1.36
PMP22-202ENST00000395936 INSRP06213 1382 aa23.52■■□□□ 1.36
PMP22-202ENST00000395936 SHANK3Q9BYB0 1731 aa23.51■■□□□ 1.35
PMP22-202ENST00000395936 SYTL4Q96C24 671 aaPredicted RBP23.51■■□□□ 1.35
PMP22-202ENST00000395936 FLT4P35916 1363 aa23.51■■□□□ 1.35
PMP22-202ENST00000395936 MYOM1P52179 1685 aa23.51■■□□□ 1.35
PMP22-202ENST00000395936 ZNF827Q17R98 1081 aa23.5■■□□□ 1.35
PMP22-202ENST00000395936 RAPGEF4Q8WZA2 1011 aa23.5■■□□□ 1.35
PMP22-202ENST00000395936 SGIP1Q9BQI5 828 aa23.5■■□□□ 1.35
PMP22-202ENST00000395936 USHBP1Q8N6Y0 703 aa23.49■■□□□ 1.35
PMP22-202ENST00000395936 AKT1S1Q96B36 256 aa23.49■■□□□ 1.35
PMP22-202ENST00000395936 NSD3Q9BZ95 1437 aa23.49■■□□□ 1.35
PMP22-202ENST00000395936 DOT1LQ8TEK3 1739 aa23.47■■□□□ 1.35
PMP22-202ENST00000395936 TATP17735 454 aaPredicted RBP23.47■■□□□ 1.35
PMP22-202ENST00000395936 NSD2O96028 1365 aa23.47■■□□□ 1.35
PMP22-202ENST00000395936 YY1P25490 414 aa23.45■■□□□ 1.34
PMP22-202ENST00000395936 SYT17Q9BSW7 474 aa23.45■■□□□ 1.34
PMP22-202ENST00000395936 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
PMP22-202ENST00000395936 SLC16A10Q8TF71 515 aa23.44■■□□□ 1.34
PMP22-202ENST00000395936 FHDC1Q9C0D6 1143 aaPredicted RBP23.44■■□□□ 1.34
PMP22-202ENST00000395936 LY75O60449 1722 aa23.44■■□□□ 1.34
PMP22-202ENST00000395936 QSER1Q2KHR3 1735 aa23.42■■□□□ 1.34
PMP22-202ENST00000395936 PCDH11XQ9BZA7 1347 aa23.42■■□□□ 1.34
PMP22-202ENST00000395936 PCDH11YQ9BZA8 1340 aa23.42■■□□□ 1.34
PMP22-202ENST00000395936 ARXQ96QS3 562 aa23.42■■□□□ 1.34
PMP22-202ENST00000395936 KCNQ4P56696 695 aa23.41■■□□□ 1.34
PMP22-202ENST00000395936 TFCP2L1Q9NZI6 479 aa23.41■■□□□ 1.34
PMP22-202ENST00000395936 WASHC2AQ641Q2 1341 aa23.4■■□□□ 1.34
PMP22-202ENST00000395936 CCNL1Q9UK58 526 aaPredicted RBP23.4■■□□□ 1.34
PMP22-202ENST00000395936 PNPLA7Q6ZV29 1317 aa23.39■■□□□ 1.34
PMP22-202ENST00000395936 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
PMP22-202ENST00000395936 EIF4G2P78344 907 aaKnown RBP eCLIP23.38■■□□□ 1.33
PMP22-202ENST00000395936 NCAPD2Q15021 1401 aa23.38■■□□□ 1.33
PMP22-202ENST00000395936 ANKRD26Q9UPS8 1709 aa23.38■■□□□ 1.33
PMP22-202ENST00000395936 CYP27B1O15528 508 aa23.37■■□□□ 1.33
PMP22-202ENST00000395936 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
PMP22-202ENST00000395936 MAP3K5Q99683 1374 aa23.37■■□□□ 1.33
PMP22-202ENST00000395936 MAP2P11137 1827 aaKnown RBP23.36■■□□□ 1.33
PMP22-202ENST00000395936 HMGB2P26583 209 aaKnown RBP23.36■■□□□ 1.33
PMP22-202ENST00000395936 POLKQ9UBT6 870 aa23.36■■□□□ 1.33
PMP22-202ENST00000395936 HSPA5P11021 654 aaKnown RBP23.34■■□□□ 1.33
PMP22-202ENST00000395936 POLD1P28340 1107 aa23.34■■□□□ 1.33
PMP22-202ENST00000395936 NKX1-1Q15270 411 aaPredicted RBP23.34■■□□□ 1.33
PMP22-202ENST00000395936 EYA1Q99502 592 aa23.34■■□□□ 1.33
PMP22-202ENST00000395936 COL24A1Q17RW2 1714 aa23.33■■□□□ 1.33
PMP22-202ENST00000395936 MPRIPQ6WCQ1 1025 aa23.33■■□□□ 1.33
PMP22-202ENST00000395936 SPG7Q9UQ90 795 aa23.33■■□□□ 1.33
PMP22-202ENST00000395936 TUBGCP6Q96RT7 1819 aa23.33■■□□□ 1.32
PMP22-202ENST00000395936 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.32
PMP22-202ENST00000395936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.32■■□□□ 1.32
PMP22-202ENST00000395936 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
PMP22-202ENST00000395936 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
PMP22-202ENST00000395936 PANK3Q9H999 370 aa23.3■■□□□ 1.32
PMP22-202ENST00000395936 COL23A1Q86Y22 540 aaPredicted RBP23.29■■□□□ 1.32
PMP22-202ENST00000395936 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
PMP22-202ENST00000395936 TOGARAM1Q9Y4F4 1720 aa23.28■■□□□ 1.32
PMP22-202ENST00000395936 ITGB4P16144 1822 aa23.27■■□□□ 1.32
PMP22-202ENST00000395936 TNNT2P45379 298 aaPredicted RBP23.27■■□□□ 1.32
PMP22-202ENST00000395936 EIF4A2Q14240 407 aaKnown RBP23.27■■□□□ 1.32
PMP22-202ENST00000395936 PIGBQ92521 554 aa23.27■■□□□ 1.32
PMP22-202ENST00000395936 C5P01031 1676 aa23.26■■□□□ 1.31
PMP22-202ENST00000395936 MSH5O43196 834 aa23.25■■□□□ 1.31
PMP22-202ENST00000395936 IFNL2Q8IZJ0 200 aa23.25■■□□□ 1.31
PMP22-202ENST00000395936 FLAD1Q8NFF5 587 aa23.25■■□□□ 1.31
PMP22-202ENST00000395936 PLEKHG2Q9H7P9 1386 aa23.25■■□□□ 1.31
PMP22-202ENST00000395936 TAF1LQ8IZX4 1826 aa23.24■■□□□ 1.31
PMP22-202ENST00000395936 PHKG2P15735 406 aa23.23■■□□□ 1.31
PMP22-202ENST00000395936 KLHL34Q8N239 644 aa23.22■■□□□ 1.31
PMP22-202ENST00000395936 GPR162Q16538 588 aa23.21■■□□□ 1.31
PMP22-202ENST00000395936 TMOD3Q9NYL9 352 aa23.21■■□□□ 1.31
PMP22-202ENST00000395936 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
PMP22-202ENST00000395936 CHD4Q14839 1912 aa23.2■■□□□ 1.3
PMP22-202ENST00000395936 C4BP0C0L5 1744 aa23.19■■□□□ 1.3
PMP22-202ENST00000395936 UTRNP46939 3433 aa23.19■■□□□ 1.3
PMP22-202ENST00000395936 LOC102724428A0A0B4J2F2 783 aa23.18■■□□□ 1.3
PMP22-202ENST00000395936 SIK1P57059 783 aa23.18■■□□□ 1.3
PMP22-202ENST00000395936 MORC1Q86VD1 984 aa23.18■■□□□ 1.3
PMP22-202ENST00000395936 ZNF784Q8NCA9 323 aaPredicted RBP23.18■■□□□ 1.3
PMP22-202ENST00000395936 AK7Q96M32 723 aa23.18■■□□□ 1.3
PMP22-202ENST00000395936 NLGN2Q8NFZ4 835 aa23.17■■□□□ 1.3
PMP22-202ENST00000395936 ASAP1Q9ULH1 1129 aa23.17■■□□□ 1.3
PMP22-202ENST00000395936 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
PMP22-202ENST00000395936 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
PMP22-202ENST00000395936 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
PMP22-202ENST00000395936 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
PMP22-202ENST00000395936 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.29
PMP22-202ENST00000395936 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
PMP22-202ENST00000395936 LINC00116Q8NCU8 138 aa23.14■■□□□ 1.29
PMP22-202ENST00000395936 ATG3Q9NT62 314 aa23.14■■□□□ 1.29
PMP22-202ENST00000395936 SSFA2P28290 1259 aa23.13■■□□□ 1.29
PMP22-202ENST00000395936 AMOTQ4VCS5 1084 aa23.13■■□□□ 1.29
PMP22-202ENST00000395936 DCAF5Q96JK2 942 aa23.13■■□□□ 1.29
PMP22-202ENST00000395936 CD2APQ9Y5K6 639 aa23.13■■□□□ 1.29
PMP22-202ENST00000395936 UBR3Q6ZT12 1888 aa23.13■■□□□ 1.29
PMP22-202ENST00000395936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.12■■□□□ 1.29
PMP22-202ENST00000395936 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms