RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
AP3S1-202ENST00000395548 TLL2Q9Y6L7 1015 aa9.66□□□□□ -0.86
AP3S1-202ENST00000395548 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
AP3S1-202ENST00000395548 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
AP3S1-202ENST00000395548 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
AP3S1-202ENST00000395548 CEBPAP49715 358 aaPredicted RBP9.64□□□□□ -0.87
AP3S1-202ENST00000395548 FBXO31Q5XUX0 539 aaPredicted RBP9.64□□□□□ -0.87
AP3S1-202ENST00000395548 LRRN4Q8WUT4 740 aa9.64□□□□□ -0.87
AP3S1-202ENST00000395548 ATP13A2Q9NQ11 1180 aa9.64□□□□□ -0.87
AP3S1-202ENST00000395548 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
AP3S1-202ENST00000395548 FER1L4A9Z1Z3 1794 aa9.64□□□□□ -0.87
AP3S1-202ENST00000395548 NCOA1Q15788 1441 aa9.64□□□□□ -0.87
AP3S1-202ENST00000395548 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
AP3S1-202ENST00000395548 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
AP3S1-202ENST00000395548 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
AP3S1-202ENST00000395548 ARID5BQ14865 1188 aa9.62□□□□□ -0.87
AP3S1-202ENST00000395548 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
AP3S1-202ENST00000395548 CAPN5O15484 640 aaPredicted RBP9.61□□□□□ -0.87
AP3S1-202ENST00000395548 ADH1CP00326 375 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 RFC5P40937 340 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 NNTQ13423 1086 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 TMEM259Q4ZIN3 620 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 POTEAQ6S8J7 498 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 SH3BP5LQ7L8J4 393 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 SH3RF1Q7Z6J0 888 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 PNMA1Q8ND90 353 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
AP3S1-202ENST00000395548 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
AP3S1-202ENST00000395548 FRMPD1Q5SYB0 1578 aa9.6□□□□□ -0.87
AP3S1-202ENST00000395548 NR6A1Q15406 480 aa9.6□□□□□ -0.87
AP3S1-202ENST00000395548 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
AP3S1-202ENST00000395548 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
AP3S1-202ENST00000395548 ZNF775Q96BV0 537 aaPredicted RBP9.6□□□□□ -0.87
AP3S1-202ENST00000395548 PTPRKQ15262 1439 aa9.59□□□□□ -0.87
AP3S1-202ENST00000395548 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
AP3S1-202ENST00000395548 NR5A1Q13285 461 aa9.59□□□□□ -0.87
AP3S1-202ENST00000395548 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
AP3S1-202ENST00000395548 DENND4BO75064 1496 aaPredicted RBP9.59□□□□□ -0.87
AP3S1-202ENST00000395548 DISP1Q96F81 1524 aa9.58□□□□□ -0.88
AP3S1-202ENST00000395548 ARHGEF12Q9NZN5 1544 aa9.58□□□□□ -0.88
AP3S1-202ENST00000395548 KIAA0556O60303 1618 aa9.58□□□□□ -0.88
AP3S1-202ENST00000395548 USP17L8P0C7I0 530 aa9.58□□□□□ -0.88
AP3S1-202ENST00000395548 IQGAP2Q13576 1575 aa9.58□□□□□ -0.88
AP3S1-202ENST00000395548 EFCAB5A4FU69 1503 aa9.57□□□□□ -0.88
AP3S1-202ENST00000395548 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
AP3S1-202ENST00000395548 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
AP3S1-202ENST00000395548 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
AP3S1-202ENST00000395548 MAP4K5Q9Y4K4 846 aa9.57□□□□□ -0.88
AP3S1-202ENST00000395548 MAGI2Q86UL8 1455 aa9.57□□□□□ -0.88
AP3S1-202ENST00000395548 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
AP3S1-202ENST00000395548 GRM5P41594 1212 aa9.56□□□□□ -0.88
AP3S1-202ENST00000395548 WDR4P57081 412 aaKnown RBP9.56□□□□□ -0.88
AP3S1-202ENST00000395548 PTK2Q05397 1052 aa9.56□□□□□ -0.88
AP3S1-202ENST00000395548 VASH1Q7L8A9 365 aaPredicted RBP9.56□□□□□ -0.88
AP3S1-202ENST00000395548 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
AP3S1-202ENST00000395548 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
AP3S1-202ENST00000395548 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
AP3S1-202ENST00000395548 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
AP3S1-202ENST00000395548 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
AP3S1-202ENST00000395548 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
AP3S1-202ENST00000395548 IGF1RP08069 1367 aa9.54□□□□□ -0.88
AP3S1-202ENST00000395548 TIMP2P16035 220 aa9.54□□□□□ -0.88
AP3S1-202ENST00000395548 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
AP3S1-202ENST00000395548 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
AP3S1-202ENST00000395548 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
AP3S1-202ENST00000395548 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
AP3S1-202ENST00000395548 ESF1Q9H501 851 aaKnown RBP9.53□□□□□ -0.88
AP3S1-202ENST00000395548 CPS1P31327 1500 aa9.52□□□□□ -0.88
AP3S1-202ENST00000395548 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
AP3S1-202ENST00000395548 FSHRP23945 695 aa9.52□□□□□ -0.89
AP3S1-202ENST00000395548 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
AP3S1-202ENST00000395548 FAM9AQ8IZU1 332 aaPredicted RBP9.52□□□□□ -0.89
AP3S1-202ENST00000395548 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
AP3S1-202ENST00000395548 HMX1Q9NP08 348 aaPredicted RBP9.52□□□□□ -0.89
AP3S1-202ENST00000395548 CAMSAP1Q5T5Y3 1602 aa9.52□□□□□ -0.89
AP3S1-202ENST00000395548 ZMYM4Q5VZL5 1548 aa9.51□□□□□ -0.89
AP3S1-202ENST00000395548 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
AP3S1-202ENST00000395548 NR3C2P08235 984 aa9.51□□□□□ -0.89
AP3S1-202ENST00000395548 BMP1P13497 986 aa9.51□□□□□ -0.89
AP3S1-202ENST00000395548 SCARF1Q14162 830 aa9.51□□□□□ -0.89
AP3S1-202ENST00000395548 SLC10A4Q96EP9 437 aa9.51□□□□□ -0.89
AP3S1-202ENST00000395548 RICTORQ6R327 1708 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 MRPL14Q6P1L8 145 aaKnown RBP9.49□□□□□ -0.89
AP3S1-202ENST00000395548 CCDC116Q8IYX3 515 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 CARMIL1Q5VZK9 1371 aa9.49□□□□□ -0.89
AP3S1-202ENST00000395548 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
AP3S1-202ENST00000395548 ATP10AO60312 1499 aa9.48□□□□□ -0.89
AP3S1-202ENST00000395548 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
AP3S1-202ENST00000395548 ZFP42Q96MM3 310 aa9.48□□□□□ -0.89
AP3S1-202ENST00000395548 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
AP3S1-202ENST00000395548 SETD1AO15047 1707 aaKnown RBP9.48□□□□□ -0.89
AP3S1-202ENST00000395548 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
AP3S1-202ENST00000395548 PLA2R1Q13018 1463 aa9.47□□□□□ -0.89
AP3S1-202ENST00000395548 TREML4Q6UXN2 200 aa9.47□□□□□ -0.89
AP3S1-202ENST00000395548 KCTD15Q96SI1 283 aaPredicted RBP9.47□□□□□ -0.89
AP3S1-202ENST00000395548 TRIM34Q9BYJ4 488 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms