RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 COL18A1P39060 1754 aa16.25■□□□□ 0.19
SSH2-203ENST00000394848 CAMTA1Q9Y6Y1 1673 aa16.25■□□□□ 0.19
SSH2-203ENST00000394848 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
SSH2-203ENST00000394848 C8orf37Q96NL8 207 aa16.25■□□□□ 0.19
SSH2-203ENST00000394848 LTN1O94822 1766 aa16.25■□□□□ 0.19
SSH2-203ENST00000394848 KDRP35968 1356 aa16.25■□□□□ 0.19
SSH2-203ENST00000394848 ERBB3P21860 1342 aa16.24■□□□□ 0.19
SSH2-203ENST00000394848 GNAI1P63096 354 aa16.24■□□□□ 0.19
SSH2-203ENST00000394848 MEX3CQ5U5Q3 659 aaKnown RBP16.24■□□□□ 0.19
SSH2-203ENST00000394848 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
SSH2-203ENST00000394848 LMO7Q8WWI1 1683 aa16.24■□□□□ 0.19
SSH2-203ENST00000394848 SLIT2O94813 1529 aa16.24■□□□□ 0.19
SSH2-203ENST00000394848 COL14A1Q05707 1796 aaKnown RBP16.24■□□□□ 0.19
SSH2-203ENST00000394848 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
SSH2-203ENST00000394848 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
SSH2-203ENST00000394848 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
SSH2-203ENST00000394848 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
SSH2-203ENST00000394848 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
SSH2-203ENST00000394848 PDE3AQ14432 1141 aa16.22■□□□□ 0.19
SSH2-203ENST00000394848 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
SSH2-203ENST00000394848 FRAT1Q92837 279 aaPredicted RBP16.22■□□□□ 0.19
SSH2-203ENST00000394848 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
SSH2-203ENST00000394848 COL5A2P05997 1499 aaPredicted RBP16.22■□□□□ 0.19
SSH2-203ENST00000394848 EVA1CP58658 441 aa16.21■□□□□ 0.19
SSH2-203ENST00000394848 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
SSH2-203ENST00000394848 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.18
SSH2-203ENST00000394848 MSH5O43196 834 aa16.21■□□□□ 0.18
SSH2-203ENST00000394848 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.18
SSH2-203ENST00000394848 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.18
SSH2-203ENST00000394848 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.18
SSH2-203ENST00000394848 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
SSH2-203ENST00000394848 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
SSH2-203ENST00000394848 NBPF6Q5VWK0 638 aa16.19■□□□□ 0.18
SSH2-203ENST00000394848 MCM10Q7L590 875 aa16.19■□□□□ 0.18
SSH2-203ENST00000394848 NBPF4Q96M43 638 aa16.19■□□□□ 0.18
SSH2-203ENST00000394848 STRN4Q9NRL3 753 aa16.19■□□□□ 0.18
SSH2-203ENST00000394848 AFF2P51816 1311 aa16.19■□□□□ 0.18
SSH2-203ENST00000394848 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
SSH2-203ENST00000394848 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
SSH2-203ENST00000394848 USP21Q9UK80 565 aa16.18■□□□□ 0.18
SSH2-203ENST00000394848 USHBP1Q8N6Y0 703 aa16.18■□□□□ 0.18
SSH2-203ENST00000394848 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
SSH2-203ENST00000394848 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
SSH2-203ENST00000394848 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
SSH2-203ENST00000394848 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
SSH2-203ENST00000394848 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
SSH2-203ENST00000394848 HTATSF1O43719 755 aaKnown RBP16.16■□□□□ 0.18
SSH2-203ENST00000394848 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
SSH2-203ENST00000394848 CARD10Q9BWT7 1032 aa16.16■□□□□ 0.18
SSH2-203ENST00000394848 CRB1P82279 1406 aa16.16■□□□□ 0.18
SSH2-203ENST00000394848 PLCH1Q4KWH8 1693 aa16.16■□□□□ 0.18
SSH2-203ENST00000394848 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
SSH2-203ENST00000394848 CHL1O00533 1208 aa16.15■□□□□ 0.18
SSH2-203ENST00000394848 VAMP4O75379 141 aa16.15■□□□□ 0.18
SSH2-203ENST00000394848 VPS72Q15906 364 aa16.15■□□□□ 0.18
SSH2-203ENST00000394848 ALDH1L2Q3SY69 923 aa16.15■□□□□ 0.18
SSH2-203ENST00000394848 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
SSH2-203ENST00000394848 ZKSCAN2Q63HK3 967 aa16.15■□□□□ 0.18
SSH2-203ENST00000394848 RGPD5Q99666 1765 aa16.14■□□□□ 0.18
SSH2-203ENST00000394848 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
SSH2-203ENST00000394848 COG6Q9Y2V7 657 aa16.14■□□□□ 0.17
SSH2-203ENST00000394848 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
SSH2-203ENST00000394848 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
SSH2-203ENST00000394848 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
SSH2-203ENST00000394848 MS4A1P11836 297 aa16.13■□□□□ 0.17
SSH2-203ENST00000394848 TSPYL6Q8N831 410 aa16.13■□□□□ 0.17
SSH2-203ENST00000394848 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
SSH2-203ENST00000394848 NRAPQ86VF7 1730 aa16.13■□□□□ 0.17
SSH2-203ENST00000394848 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
SSH2-203ENST00000394848 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
SSH2-203ENST00000394848 C8orf58Q8NAV2 365 aa16.13■□□□□ 0.17
SSH2-203ENST00000394848 TRPC5Q9UL62 973 aaPredicted RBP16.13■□□□□ 0.17
SSH2-203ENST00000394848 NOB1Q9ULX3 412 aaKnown RBP16.13■□□□□ 0.17
SSH2-203ENST00000394848 IPO8O15397 1037 aaKnown RBP16.12■□□□□ 0.17
SSH2-203ENST00000394848 CLUAP1Q96AJ1 413 aa16.12■□□□□ 0.17
SSH2-203ENST00000394848 TSHZ2Q9NRE2 1034 aa16.12■□□□□ 0.17
SSH2-203ENST00000394848 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
SSH2-203ENST00000394848 RLBP1P12271 317 aa16.11■□□□□ 0.17
SSH2-203ENST00000394848 DZIP1LQ8IYY4 767 aaKnown RBP16.11■□□□□ 0.17
SSH2-203ENST00000394848 QTRT2Q9H974 415 aaKnown RBP16.11■□□□□ 0.17
SSH2-203ENST00000394848 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
SSH2-203ENST00000394848 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
SSH2-203ENST00000394848 THRAP3Q9Y2W1 955 aaKnown RBP16.11■□□□□ 0.17
SSH2-203ENST00000394848 ATRNO75882 1429 aa16.11■□□□□ 0.17
SSH2-203ENST00000394848 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
SSH2-203ENST00000394848 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
SSH2-203ENST00000394848 FTSJ3Q8IY81 847 aaKnown RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 GJD4Q96KN9 370 aaPredicted RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 RGS17Q9UGC6 210 aaPredicted RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 CCDC9Q9Y3X0 531 aaKnown RBP16.1■□□□□ 0.17
SSH2-203ENST00000394848 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
SSH2-203ENST00000394848 TRIM27P14373 513 aa16.09■□□□□ 0.17
SSH2-203ENST00000394848 AAMPQ13685 434 aa16.09■□□□□ 0.17
SSH2-203ENST00000394848 AMOTQ4VCS5 1084 aa16.09■□□□□ 0.17
SSH2-203ENST00000394848 BARGINQ6ZT62 677 aa16.09■□□□□ 0.17
SSH2-203ENST00000394848 IL17REQ8NFR9 667 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms