RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PLIN1O60240 522 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 FKBP5Q13451 457 aaPredicted RBP15.6■□□□□ 0.09
USP49-203ENST00000394253 MAP3K11Q16584 847 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 SEPT10Q9P0V9 454 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 CTNNA2P26232 953 aa15.6■□□□□ 0.09
USP49-203ENST00000394253 HLTFQ14527 1009 aaKnown RBP eCLIP15.6■□□□□ 0.09
USP49-203ENST00000394253 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.6■□□□□ 0.09
USP49-203ENST00000394253 RBM28Q9NW13 759 aaKnown RBP15.6■□□□□ 0.09
USP49-203ENST00000394253 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
USP49-203ENST00000394253 RPUSD2Q8IZ73 545 aaKnown RBP15.6■□□□□ 0.09
USP49-203ENST00000394253 STMN1P16949 149 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 CCDC110Q8TBZ0 833 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 SPATA32Q96LK8 384 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 IL27Q8NEV9 243 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 A0A1W2PRG0 241 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
USP49-203ENST00000394253 HSF2BPO75031 334 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 MAP7D1Q3KQU3 841 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 GBP7Q8N8V2 638 aaPredicted RBP15.59■□□□□ 0.09
USP49-203ENST00000394253 PAXBP1Q9Y5B6 917 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 CYP46A1Q9Y6A2 500 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 PPP4R3BQ5MIZ7 849 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 CCDC155Q8N6L0 562 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 FSD1Q9BTV5 496 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 FAM114A2Q9NRY5 505 aa15.59■□□□□ 0.09
USP49-203ENST00000394253 MCM5P33992 734 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 MXRA7P84157 204 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 PKD2Q13563 968 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 RRP7AQ9Y3A4 280 aaKnown RBP15.58■□□□□ 0.09
USP49-203ENST00000394253 KIF4AO95239 1232 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 GSDMDP57764 484 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 KRT222Q8N1A0 295 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 LNPKQ9C0E8 428 aa15.58■□□□□ 0.09
USP49-203ENST00000394253 PPFIA2O75334 1257 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 TUBB4BP68371 445 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 ZBTB17Q13105 803 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 KIF4BQ2VIQ3 1234 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 COG3Q96JB2 828 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 IQCGQ9H095 443 aaKnown RBP15.58■□□□□ 0.08
USP49-203ENST00000394253 PLVAPQ9BX97 442 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
USP49-203ENST00000394253 GBP6Q6ZN66 633 aa15.58■□□□□ 0.08
USP49-203ENST00000394253 SH3BGRP55822 239 aaPredicted RBP15.58■□□□□ 0.08
USP49-203ENST00000394253 CKAP4Q07065 602 aaKnown RBP15.58■□□□□ 0.08
USP49-203ENST00000394253 EID1Q9Y6B2 187 aa15.57■□□□□ 0.08
USP49-203ENST00000394253 MAP4K4O95819 1239 aaPredicted RBP15.57■□□□□ 0.08
USP49-203ENST00000394253 ATP2B1P20020 1258 aa15.57■□□□□ 0.08
USP49-203ENST00000394253 CTNNBL1Q8WYA6 563 aaPredicted RBP15.57■□□□□ 0.08
USP49-203ENST00000394253 ZHX1Q9UKY1 873 aaPredicted RBP15.57■□□□□ 0.08
USP49-203ENST00000394253 SLU7O95391 586 aaKnown RBP15.57■□□□□ 0.08
USP49-203ENST00000394253 WASF1Q92558 559 aa15.57■□□□□ 0.08
USP49-203ENST00000394253 LRRC45Q96CN5 670 aa15.57■□□□□ 0.08
USP49-203ENST00000394253 LIG1P18858 919 aa15.56■□□□□ 0.08
USP49-203ENST00000394253 PPM1FP49593 454 aaPredicted RBP15.56■□□□□ 0.08
USP49-203ENST00000394253 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
USP49-203ENST00000394253 CACNA2D4Q7Z3S7 1137 aa15.56■□□□□ 0.08
USP49-203ENST00000394253 LUC7L2Q9Y383 392 aaKnown RBP15.56■□□□□ 0.08
USP49-203ENST00000394253 NEUROD6Q96NK8 337 aa15.56■□□□□ 0.08
USP49-203ENST00000394253 AIMP1Q12904 312 aaKnown RBP15.56■□□□□ 0.08
USP49-203ENST00000394253 PPP1R9BQ96SB3 815 aa15.56■□□□□ 0.08
USP49-203ENST00000394253 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
USP49-203ENST00000394253 GOLGA4Q13439 2230 aaKnown RBP15.56■□□□□ 0.08
USP49-203ENST00000394253 DZIP1Q86YF9 867 aaKnown RBP15.56■□□□□ 0.08
USP49-203ENST00000394253 LTV1Q96GA3 475 aaPredicted RBP15.56■□□□□ 0.08
USP49-203ENST00000394253 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
USP49-203ENST00000394253 MAATS1Q7Z4T9 603 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 CEP57Q86XR8 500 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 CCDC69A6NI79 296 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 TPD52P55327 224 aaPredicted RBP15.55■□□□□ 0.08
USP49-203ENST00000394253 NACAP1Q9BZK3 213 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 TSG101Q99816 390 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 NUP155O75694 1391 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 VCX3BQ9H321 246 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 ARFGAP3Q9NP61 516 aa15.55■□□□□ 0.08
USP49-203ENST00000394253 EVA1CP58658 441 aa15.54■□□□□ 0.08
USP49-203ENST00000394253 GNL3LQ9NVN8 582 aaKnown RBP15.54■□□□□ 0.08
USP49-203ENST00000394253 IFI16Q16666 785 aaKnown RBP15.54■□□□□ 0.08
USP49-203ENST00000394253 K7ELQ4 463 aaPredicted RBP15.54■□□□□ 0.08
USP49-203ENST00000394253 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
USP49-203ENST00000394253 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
USP49-203ENST00000394253 PSMC4P43686 418 aa15.54■□□□□ 0.08
USP49-203ENST00000394253 KIF5AQ12840 1032 aa15.54■□□□□ 0.08
USP49-203ENST00000394253 LARP1BQ659C4 914 aaKnown RBP15.54■□□□□ 0.08
USP49-203ENST00000394253 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
USP49-203ENST00000394253 PRIMPOLQ96LW4 560 aa15.54■□□□□ 0.08
USP49-203ENST00000394253 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 TOP1P11387 765 aaKnown RBP15.53■□□□□ 0.08
USP49-203ENST00000394253 CCDC121Q6ZUS5 278 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 MACROD2A1Z1Q3 448 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 GMNNO75496 209 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 RABGAP1Q9Y3P9 1069 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 EVC2Q86UK5 1308 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 ACTN2P35609 894 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 CETN1Q12798 172 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
USP49-203ENST00000394253 NUP88Q99567 741 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms