RNA–Protein interactions for RNA: ENST00000393991.5

TSC22D4-202, Transcript of TSC22 domain family member 4, humanhuman

TSL 2 BASIC

Gene TSC22D4, Length 1,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-202ENST00000393991 MAPK8IP3Q9UPT6 1336 aa25.49■■□□□ 1.67
TSC22D4-202ENST00000393991 OVOS2A0A0G2JMS6 1433 aa25.49■■□□□ 1.67
TSC22D4-202ENST00000393991 CCDC146Q8IYE0 955 aa25.49■■□□□ 1.67
TSC22D4-202ENST00000393991 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
TSC22D4-202ENST00000393991 PHACTR3Q96KR7 559 aa25.47■■□□□ 1.67
TSC22D4-202ENST00000393991 RGS17Q9UGC6 210 aaPredicted RBP25.47■■□□□ 1.67
TSC22D4-202ENST00000393991 AMOTQ4VCS5 1084 aa25.46■■□□□ 1.67
TSC22D4-202ENST00000393991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.46■■□□□ 1.67
TSC22D4-202ENST00000393991 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.66
TSC22D4-202ENST00000393991 FAM98CQ17RN3 349 aaKnown RBP25.45■■□□□ 1.66
TSC22D4-202ENST00000393991 PLEKHO1Q53GL0 409 aaPredicted RBP25.45■■□□□ 1.66
TSC22D4-202ENST00000393991 RBM6P78332 1123 aaKnown RBP25.44■■□□□ 1.66
TSC22D4-202ENST00000393991 LRRC37A3O60309 1634 aa25.43■■□□□ 1.66
TSC22D4-202ENST00000393991 SHANK3Q9BYB0 1731 aa25.42■■□□□ 1.66
TSC22D4-202ENST00000393991 SPG7Q9UQ90 795 aa25.42■■□□□ 1.66
TSC22D4-202ENST00000393991 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
TSC22D4-202ENST00000393991 ONECUT3O60422 494 aaPredicted RBP25.41■■□□□ 1.66
TSC22D4-202ENST00000393991 MTHFSDQ2M296 383 aaKnown RBP25.41■■□□□ 1.66
TSC22D4-202ENST00000393991 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
TSC22D4-202ENST00000393991 APAF1O14727 1248 aa25.4■■□□□ 1.66
TSC22D4-202ENST00000393991 ZCRB1Q8TBF4 217 aaKnown RBP25.4■■□□□ 1.66
TSC22D4-202ENST00000393991 TNS2Q63HR2 1409 aa25.4■■□□□ 1.66
TSC22D4-202ENST00000393991 EXOC5O00471 708 aa25.39■■□□□ 1.65
TSC22D4-202ENST00000393991 NFE2L2Q16236 605 aa25.39■■□□□ 1.65
TSC22D4-202ENST00000393991 DDB1Q16531 1140 aa25.39■■□□□ 1.65
TSC22D4-202ENST00000393991 RXRBP28702 533 aa25.38■■□□□ 1.65
TSC22D4-202ENST00000393991 TMPOP42166 694 aaKnown RBP25.38■■□□□ 1.65
TSC22D4-202ENST00000393991 POTEAQ6S8J7 498 aa25.38■■□□□ 1.65
TSC22D4-202ENST00000393991 PCDH11XQ9BZA7 1347 aa25.38■■□□□ 1.65
TSC22D4-202ENST00000393991 PCDH11YQ9BZA8 1340 aa25.38■■□□□ 1.65
TSC22D4-202ENST00000393991 ZNF530Q6P9A1 599 aaPredicted RBP25.37■■□□□ 1.65
TSC22D4-202ENST00000393991 A0A0G2JS52 829 aa25.36■■□□□ 1.65
TSC22D4-202ENST00000393991 MYT1Q01538 1121 aa25.36■■□□□ 1.65
TSC22D4-202ENST00000393991 NCBP3Q53F19 620 aaKnown RBP25.35■■□□□ 1.65
TSC22D4-202ENST00000393991 C1orf141Q5JVX7 400 aa25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 IFNL2Q8IZJ0 200 aa25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 NGEFQ8N5V2 710 aa25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 RRP7AQ9Y3A4 280 aaKnown RBP25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 RIPK4P57078 832 aa25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 AKAP4Q5JQC9 854 aa25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 SEPT12Q8IYM1 358 aa25.34■■□□□ 1.65
TSC22D4-202ENST00000393991 MAP3K5Q99683 1374 aa25.33■■□□□ 1.65
TSC22D4-202ENST00000393991 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.65
TSC22D4-202ENST00000393991 CYP27B1O15528 508 aa25.33■■□□□ 1.65
TSC22D4-202ENST00000393991 PHKG2P15735 406 aa25.33■■□□□ 1.65
TSC22D4-202ENST00000393991 NEUROD2Q15784 382 aa25.33■■□□□ 1.65
TSC22D4-202ENST00000393991 GNAT3A8MTJ3 354 aa25.32■■□□□ 1.64
TSC22D4-202ENST00000393991 HNRNPUQ00839 825 aaKnown RBP eCLIP25.31■■□□□ 1.64
TSC22D4-202ENST00000393991 LMOD3Q0VAK6 560 aa25.31■■□□□ 1.64
TSC22D4-202ENST00000393991 DDX54Q8TDD1 881 aaKnown RBP25.31■■□□□ 1.64
TSC22D4-202ENST00000393991 BRWD3Q6RI45 1802 aa25.31■■□□□ 1.64
TSC22D4-202ENST00000393991 HTATSF1O43719 755 aaKnown RBP25.3■■□□□ 1.64
TSC22D4-202ENST00000393991 SENP3-EIF4A1A0A087X0R7 540 aa25.29■■□□□ 1.64
TSC22D4-202ENST00000393991 HSP90AB1P08238 724 aaKnown RBP25.29■■□□□ 1.64
TSC22D4-202ENST00000393991 PDE3BQ13370 1112 aa25.29■■□□□ 1.64
TSC22D4-202ENST00000393991 CCDC27Q2M243 656 aa25.29■■□□□ 1.64
TSC22D4-202ENST00000393991 SCN11AQ9UI33 1791 aa25.29■■□□□ 1.64
TSC22D4-202ENST00000393991 ADAMTS7Q9UKP4 1686 aa25.29■■□□□ 1.64
TSC22D4-202ENST00000393991 RTF1Q92541 710 aaKnown RBP25.28■■□□□ 1.64
TSC22D4-202ENST00000393991 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
TSC22D4-202ENST00000393991 TRIM35Q9UPQ4 493 aa25.28■■□□□ 1.64
TSC22D4-202ENST00000393991 RGS12O14924 1447 aa25.27■■□□□ 1.64
TSC22D4-202ENST00000393991 MARCH10Q8NA82 808 aaPredicted RBP25.27■■□□□ 1.64
TSC22D4-202ENST00000393991 SALL2Q9Y467 1007 aaPredicted RBP25.27■■□□□ 1.64
TSC22D4-202ENST00000393991 DCAF5Q96JK2 942 aa25.25■■□□□ 1.63
TSC22D4-202ENST00000393991 MPRIPQ6WCQ1 1025 aa25.24■■□□□ 1.63
TSC22D4-202ENST00000393991 KDM6AO15550 1401 aaPredicted RBP25.24■■□□□ 1.63
TSC22D4-202ENST00000393991 WWC1Q8IX03 1113 aa25.23■■□□□ 1.63
TSC22D4-202ENST00000393991 CEMIPQ8WUJ3 1361 aa25.22■■□□□ 1.63
TSC22D4-202ENST00000393991 RNMTO43148 476 aaKnown RBP25.22■■□□□ 1.63
TSC22D4-202ENST00000393991 IL17REQ8NFR9 667 aa25.22■■□□□ 1.63
TSC22D4-202ENST00000393991 YTHDC1Q96MU7 727 aaKnown RBP25.22■■□□□ 1.63
TSC22D4-202ENST00000393991 TOGARAM1Q9Y4F4 1720 aa25.22■■□□□ 1.63
TSC22D4-202ENST00000393991 DCTN1Q14203 1278 aa25.21■■□□□ 1.63
TSC22D4-202ENST00000393991 MCM10Q7L590 875 aa25.21■■□□□ 1.63
TSC22D4-202ENST00000393991 KRT27Q7Z3Y8 459 aa25.21■■□□□ 1.63
TSC22D4-202ENST00000393991 ZBED9Q6R2W3 1325 aa25.21■■□□□ 1.63
TSC22D4-202ENST00000393991 LGR6Q9HBX8 967 aa25.21■■□□□ 1.63
TSC22D4-202ENST00000393991 ZNF521Q96K83 1311 aa25.2■■□□□ 1.63
TSC22D4-202ENST00000393991 DOT1LQ8TEK3 1739 aa25.2■■□□□ 1.62
TSC22D4-202ENST00000393991 BCL9O00512 1426 aa25.2■■□□□ 1.62
TSC22D4-202ENST00000393991 KAT6BQ8WYB5 2073 aa25.19■■□□□ 1.62
TSC22D4-202ENST00000393991 SIPA1L3O60292 1781 aaPredicted RBP25.18■■□□□ 1.62
TSC22D4-202ENST00000393991 ITGB4P16144 1822 aa25.18■■□□□ 1.62
TSC22D4-202ENST00000393991 MRC1P22897 1456 aa25.18■■□□□ 1.62
TSC22D4-202ENST00000393991 CALD1Q05682 793 aaKnown RBP25.18■■□□□ 1.62
TSC22D4-202ENST00000393991 WDR63Q8IWG1 891 aa25.18■■□□□ 1.62
TSC22D4-202ENST00000393991 ERVV-2B6SEH9 535 aa25.17■■□□□ 1.62
TSC22D4-202ENST00000393991 THUMPD2Q9BTF0 503 aaKnown RBP25.17■■□□□ 1.62
TSC22D4-202ENST00000393991 TEFQ10587 303 aa25.15■■□□□ 1.62
TSC22D4-202ENST00000393991 SBF2Q86WG5 1849 aa25.15■■□□□ 1.62
TSC22D4-202ENST00000393991 SLC52A2Q9HAB3 445 aa25.15■■□□□ 1.62
TSC22D4-202ENST00000393991 IL16Q14005 1332 aa25.14■■□□□ 1.61
TSC22D4-202ENST00000393991 CABP4P57796 275 aa25.13■■□□□ 1.61
TSC22D4-202ENST00000393991 FAM182BQ5T319 152 aa25.13■■□□□ 1.61
TSC22D4-202ENST00000393991 FAM196AQ6ZSG2 479 aa25.13■■□□□ 1.61
TSC22D4-202ENST00000393991 NHSQ6T4R5 1651 aa25.12■■□□□ 1.61
TSC22D4-202ENST00000393991 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
TSC22D4-202ENST00000393991 TAF7Q15545 349 aaPredicted RBP25.11■■□□□ 1.61
TSC22D4-202ENST00000393991 NFATC2IPQ8NCF5 419 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms