RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SSH1Q8WYL5 1049 aa25.36■■□□□ 1.65
RAB5C-202ENST00000393860 ERBB3P21860 1342 aa25.36■■□□□ 1.65
RAB5C-202ENST00000393860 CRB1P82279 1406 aa25.36■■□□□ 1.65
RAB5C-202ENST00000393860 CAMTA1Q9Y6Y1 1673 aa25.35■■□□□ 1.65
RAB5C-202ENST00000393860 PANK1Q8TE04 598 aa25.35■■□□□ 1.65
RAB5C-202ENST00000393860 GNAT3A8MTJ3 354 aa25.33■■□□□ 1.65
RAB5C-202ENST00000393860 MAP3K5Q99683 1374 aa25.33■■□□□ 1.65
RAB5C-202ENST00000393860 ABCA3Q99758 1704 aa25.33■■□□□ 1.65
RAB5C-202ENST00000393860 MIS18AQ9NYP9 233 aa25.33■■□□□ 1.65
RAB5C-202ENST00000393860 ROBO1Q9Y6N7 1651 aa25.33■■□□□ 1.65
RAB5C-202ENST00000393860 C8orf58Q8NAV2 365 aa25.33■■□□□ 1.65
RAB5C-202ENST00000393860 NCAPD2Q15021 1401 aa25.32■■□□□ 1.64
RAB5C-202ENST00000393860 HAP1P54257 671 aaPredicted RBP25.32■■□□□ 1.64
RAB5C-202ENST00000393860 LRRC37A3O60309 1634 aa25.31■■□□□ 1.64
RAB5C-202ENST00000393860 CLUAP1Q96AJ1 413 aa25.31■■□□□ 1.64
RAB5C-202ENST00000393860 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
RAB5C-202ENST00000393860 CHL1O00533 1208 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 VAMP4O75379 141 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 CSB-PGBD3P0DP91 1061 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 KRT24Q2M2I5 525 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 COG6Q9Y2V7 657 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 LMO7Q8WWI1 1683 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 CPDO75976 1380 aa25.3■■□□□ 1.64
RAB5C-202ENST00000393860 TCERG1O14776 1098 aaKnown RBP25.29■■□□□ 1.64
RAB5C-202ENST00000393860 PDE3AQ14432 1141 aa25.29■■□□□ 1.64
RAB5C-202ENST00000393860 TWISTNBQ3B726 338 aaPredicted RBP25.29■■□□□ 1.64
RAB5C-202ENST00000393860 RLBP1P12271 317 aa25.29■■□□□ 1.64
RAB5C-202ENST00000393860 IL17REQ8NFR9 667 aa25.28■■□□□ 1.64
RAB5C-202ENST00000393860 HTATSF1O43719 755 aaKnown RBP25.27■■□□□ 1.64
RAB5C-202ENST00000393860 PRDM11Q9NQV5 511 aa25.27■■□□□ 1.64
RAB5C-202ENST00000393860 ZKSCAN2Q63HK3 967 aa25.27■■□□□ 1.64
RAB5C-202ENST00000393860 ZNF530Q6P9A1 599 aaPredicted RBP25.27■■□□□ 1.64
RAB5C-202ENST00000393860 NOB1Q9ULX3 412 aaKnown RBP25.27■■□□□ 1.64
RAB5C-202ENST00000393860 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
RAB5C-202ENST00000393860 TSPYL4Q9UJ04 414 aa25.26■■□□□ 1.63
RAB5C-202ENST00000393860 ABCC6O95255 1503 aa25.26■■□□□ 1.63
RAB5C-202ENST00000393860 ALDH1L2Q3SY69 923 aa25.25■■□□□ 1.63
RAB5C-202ENST00000393860 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
RAB5C-202ENST00000393860 TRIM27P14373 513 aa25.22■■□□□ 1.63
RAB5C-202ENST00000393860 LGR6Q9HBX8 967 aa25.22■■□□□ 1.63
RAB5C-202ENST00000393860 MRPL50Q8N5N7 158 aaKnown RBP25.22■■□□□ 1.63
RAB5C-202ENST00000393860 AMOTQ4VCS5 1084 aa25.21■■□□□ 1.63
RAB5C-202ENST00000393860 FTSJ3Q8IY81 847 aaKnown RBP25.21■■□□□ 1.63
RAB5C-202ENST00000393860 ZNF428Q96B54 188 aa25.21■■□□□ 1.63
RAB5C-202ENST00000393860 KIF16BQ96L93 1317 aa25.21■■□□□ 1.63
RAB5C-202ENST00000393860 MPRIPQ6WCQ1 1025 aa25.2■■□□□ 1.62
RAB5C-202ENST00000393860 DZIP1LQ8IYY4 767 aaKnown RBP25.2■■□□□ 1.62
RAB5C-202ENST00000393860 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
RAB5C-202ENST00000393860 MEGF6O75095 1541 aa25.2■■□□□ 1.62
RAB5C-202ENST00000393860 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.62
RAB5C-202ENST00000393860 AKAP4Q5JQC9 854 aa25.2■■□□□ 1.62
RAB5C-202ENST00000393860 ATF7IPQ6VMQ6 1270 aa25.2■■□□□ 1.62
RAB5C-202ENST00000393860 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
RAB5C-202ENST00000393860 C1orf141Q5JVX7 400 aa25.19■■□□□ 1.62
RAB5C-202ENST00000393860 CEMIPQ8WUJ3 1361 aa25.17■■□□□ 1.62
RAB5C-202ENST00000393860 TAF7Q15545 349 aaPredicted RBP25.17■■□□□ 1.62
RAB5C-202ENST00000393860 COL5A2P05997 1499 aaPredicted RBP25.16■■□□□ 1.62
RAB5C-202ENST00000393860 TATP17735 454 aaPredicted RBP25.16■■□□□ 1.62
RAB5C-202ENST00000393860 IPO8O15397 1037 aaKnown RBP25.15■■□□□ 1.62
RAB5C-202ENST00000393860 PIP4K2BP78356 416 aa25.15■■□□□ 1.62
RAB5C-202ENST00000393860 MVPQ14764 893 aaKnown RBP25.15■■□□□ 1.62
RAB5C-202ENST00000393860 STRN4Q9NRL3 753 aa25.14■■□□□ 1.62
RAB5C-202ENST00000393860 WDR17Q8IZU2 1322 aa25.14■■□□□ 1.61
RAB5C-202ENST00000393860 BRPF1P55201 1214 aaPredicted RBP25.14■■□□□ 1.61
RAB5C-202ENST00000393860 TOM1L2Q6ZVM7 507 aa25.14■■□□□ 1.61
RAB5C-202ENST00000393860 PHLPP1O60346 1717 aa25.13■■□□□ 1.61
RAB5C-202ENST00000393860 RNMTO43148 476 aaKnown RBP25.13■■□□□ 1.61
RAB5C-202ENST00000393860 MS4A1P11836 297 aa25.13■■□□□ 1.61
RAB5C-202ENST00000393860 TMEM57Q8N5G2 664 aa25.13■■□□□ 1.61
RAB5C-202ENST00000393860 ITPRIPQ8IWB1 547 aa25.12■■□□□ 1.61
RAB5C-202ENST00000393860 TEFQ10587 303 aa25.12■■□□□ 1.61
RAB5C-202ENST00000393860 TSHZ2Q9NRE2 1034 aa25.12■■□□□ 1.61
RAB5C-202ENST00000393860 KDM2BQ8NHM5 1336 aa25.09■■□□□ 1.61
RAB5C-202ENST00000393860 KDM3BQ7LBC6 1761 aa25.09■■□□□ 1.61
RAB5C-202ENST00000393860 LARP1Q6PKG0 1096 aaKnown RBP25.09■■□□□ 1.61
RAB5C-202ENST00000393860 SPG7Q9UQ90 795 aa25.09■■□□□ 1.61
RAB5C-202ENST00000393860 COL16A1Q07092 1604 aaPredicted RBP25.09■■□□□ 1.61
RAB5C-202ENST00000393860 COL22A1Q8NFW1 1626 aaPredicted RBP25.09■■□□□ 1.61
RAB5C-202ENST00000393860 EVA1CP58658 441 aa25.08■■□□□ 1.61
RAB5C-202ENST00000393860 SKAP1Q86WV1 359 aa25.08■■□□□ 1.61
RAB5C-202ENST00000393860 PKD1L3Q7Z443 1732 aa25.08■■□□□ 1.61
RAB5C-202ENST00000393860 KCNQ3O43525 872 aa25.08■■□□□ 1.6
RAB5C-202ENST00000393860 NECTIN2Q92692 538 aa25.08■■□□□ 1.6
RAB5C-202ENST00000393860 BABAM1Q9NWV8 329 aa25.07■■□□□ 1.6
RAB5C-202ENST00000393860 BTBD11A6QL63 1104 aa25.06■■□□□ 1.6
RAB5C-202ENST00000393860 PHKG2P15735 406 aa25.06■■□□□ 1.6
RAB5C-202ENST00000393860 ADAMTS7Q9UKP4 1686 aa25.06■■□□□ 1.6
RAB5C-202ENST00000393860 TOM1O60784 492 aa25.06■■□□□ 1.6
RAB5C-202ENST00000393860 ARHGAP45Q92619 1136 aa25.06■■□□□ 1.6
RAB5C-202ENST00000393860 BTG4Q9NY30 223 aa25.06■■□□□ 1.6
RAB5C-202ENST00000393860 PARP4Q9UKK3 1724 aaKnown RBP25.06■■□□□ 1.6
RAB5C-202ENST00000393860 KDM6AO15550 1401 aaPredicted RBP25.05■■□□□ 1.6
RAB5C-202ENST00000393860 IGHDP01880 384 aa25.05■■□□□ 1.6
RAB5C-202ENST00000393860 CENPQQ7L2Z9 268 aaPredicted RBP25.05■■□□□ 1.6
RAB5C-202ENST00000393860 PCDHB15Q9Y5E8 787 aa25.05■■□□□ 1.6
RAB5C-202ENST00000393860 SIPA1L3O60292 1781 aaPredicted RBP25.04■■□□□ 1.6
RAB5C-202ENST00000393860 OVOS2A0A0G2JMS6 1433 aa25.04■■□□□ 1.6
RAB5C-202ENST00000393860 DDX19BQ9UMR2 479 aa25.04■■□□□ 1.6
RAB5C-202ENST00000393860 SCN11AQ9UI33 1791 aa25.04■■□□□ 1.6
RAB5C-202ENST00000393860 SLC4A2P04920 1241 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms