RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 USP54Q70EL1 1684 aa18.41■□□□□ 0.54
LAMB1-202ENST00000393559 NFAT5O94916 1531 aa18.41■□□□□ 0.54
LAMB1-202ENST00000393559 IL2RBP14784 551 aa18.41■□□□□ 0.54
LAMB1-202ENST00000393559 MTHFSP49914 203 aa18.41■□□□□ 0.54
LAMB1-202ENST00000393559 ERBB3P21860 1342 aa18.41■□□□□ 0.54
LAMB1-202ENST00000393559 FBLN1P23142 703 aa18.4■□□□□ 0.54
LAMB1-202ENST00000393559 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
LAMB1-202ENST00000393559 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
LAMB1-202ENST00000393559 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
LAMB1-202ENST00000393559 FHDC1Q9C0D6 1143 aaPredicted RBP18.4■□□□□ 0.54
LAMB1-202ENST00000393559 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
LAMB1-202ENST00000393559 SBF2Q86WG5 1849 aa18.39■□□□□ 0.54
LAMB1-202ENST00000393559 MTFR1LQ9H019 292 aa18.39■□□□□ 0.53
LAMB1-202ENST00000393559 RGPD3A6NKT7 1758 aaPredicted RBP18.38■□□□□ 0.53
LAMB1-202ENST00000393559 RGPD4Q7Z3J3 1758 aa18.38■□□□□ 0.53
LAMB1-202ENST00000393559 LTV1Q96GA3 475 aaPredicted RBP18.38■□□□□ 0.53
LAMB1-202ENST00000393559 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
LAMB1-202ENST00000393559 SYT17Q9BSW7 474 aa18.38■□□□□ 0.53
LAMB1-202ENST00000393559 POLKQ9UBT6 870 aa18.38■□□□□ 0.53
LAMB1-202ENST00000393559 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
LAMB1-202ENST00000393559 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
LAMB1-202ENST00000393559 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
LAMB1-202ENST00000393559 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
LAMB1-202ENST00000393559 SMG6Q86US8 1419 aaKnown RBP18.37■□□□□ 0.53
LAMB1-202ENST00000393559 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
LAMB1-202ENST00000393559 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
LAMB1-202ENST00000393559 ARXQ96QS3 562 aa18.35■□□□□ 0.53
LAMB1-202ENST00000393559 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
LAMB1-202ENST00000393559 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
LAMB1-202ENST00000393559 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
LAMB1-202ENST00000393559 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.53
LAMB1-202ENST00000393559 SYTL4Q96C24 671 aaPredicted RBP18.33■□□□□ 0.52
LAMB1-202ENST00000393559 LRRC4BQ9NT99 713 aa18.33■□□□□ 0.52
LAMB1-202ENST00000393559 ABCC6O95255 1503 aa18.33■□□□□ 0.52
LAMB1-202ENST00000393559 INSRP06213 1382 aa18.32■□□□□ 0.52
LAMB1-202ENST00000393559 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
LAMB1-202ENST00000393559 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
LAMB1-202ENST00000393559 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
LAMB1-202ENST00000393559 IP6K1Q92551 441 aa18.32■□□□□ 0.52
LAMB1-202ENST00000393559 SGIP1Q9BQI5 828 aa18.32■□□□□ 0.52
LAMB1-202ENST00000393559 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
LAMB1-202ENST00000393559 KCNQ4P56696 695 aa18.3■□□□□ 0.52
LAMB1-202ENST00000393559 DIAPH1O60610 1272 aaKnown RBP18.28■□□□□ 0.52
LAMB1-202ENST00000393559 AMPHP49418 695 aa18.28■□□□□ 0.52
LAMB1-202ENST00000393559 PRIM1P49642 420 aaKnown RBP18.28■□□□□ 0.52
LAMB1-202ENST00000393559 GPR162Q16538 588 aa18.28■□□□□ 0.52
LAMB1-202ENST00000393559 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
LAMB1-202ENST00000393559 FLT4P35916 1363 aa18.28■□□□□ 0.52
LAMB1-202ENST00000393559 NHSQ6T4R5 1651 aa18.28■□□□□ 0.52
LAMB1-202ENST00000393559 SLC27A3Q5K4L6 730 aa18.27■□□□□ 0.52
LAMB1-202ENST00000393559 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
LAMB1-202ENST00000393559 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
LAMB1-202ENST00000393559 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
LAMB1-202ENST00000393559 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.51
LAMB1-202ENST00000393559 POLD1P28340 1107 aa18.26■□□□□ 0.51
LAMB1-202ENST00000393559 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
LAMB1-202ENST00000393559 RTL1A6NKG5 1358 aa18.26■□□□□ 0.51
LAMB1-202ENST00000393559 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
LAMB1-202ENST00000393559 HOXC9P31274 260 aa18.25■□□□□ 0.51
LAMB1-202ENST00000393559 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
LAMB1-202ENST00000393559 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
LAMB1-202ENST00000393559 ZCRB1Q8TBF4 217 aaKnown RBP18.24■□□□□ 0.51
LAMB1-202ENST00000393559 LTN1O94822 1766 aa18.24■□□□□ 0.51
LAMB1-202ENST00000393559 MSH5O43196 834 aa18.23■□□□□ 0.51
LAMB1-202ENST00000393559 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
LAMB1-202ENST00000393559 IL13P35225 146 aa18.23■□□□□ 0.51
LAMB1-202ENST00000393559 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.518e-7■□□□□ 9.4
LAMB1-202ENST00000393559 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
LAMB1-202ENST00000393559 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
LAMB1-202ENST00000393559 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
LAMB1-202ENST00000393559 GOLGB1Q14789 3259 aaKnown RBP18.22■□□□□ 0.51
LAMB1-202ENST00000393559 BTAF1O14981 1849 aa18.21■□□□□ 0.51
LAMB1-202ENST00000393559 KAT6BQ8WYB5 2073 aa18.21■□□□□ 0.51
LAMB1-202ENST00000393559 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
LAMB1-202ENST00000393559 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
LAMB1-202ENST00000393559 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
LAMB1-202ENST00000393559 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
LAMB1-202ENST00000393559 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
LAMB1-202ENST00000393559 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
LAMB1-202ENST00000393559 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
LAMB1-202ENST00000393559 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
LAMB1-202ENST00000393559 NLGN2Q8NFZ4 835 aa18.17■□□□□ 0.5
LAMB1-202ENST00000393559 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
LAMB1-202ENST00000393559 C1QTNF8P60827 252 aa18.16■□□□□ 0.5
LAMB1-202ENST00000393559 MEGF6O75095 1541 aa18.15■□□□□ 0.5
LAMB1-202ENST00000393559 HMOX1P09601 288 aa18.15■□□□□ 0.5
LAMB1-202ENST00000393559 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
LAMB1-202ENST00000393559 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
LAMB1-202ENST00000393559 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
LAMB1-202ENST00000393559 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
LAMB1-202ENST00000393559 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
LAMB1-202ENST00000393559 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
LAMB1-202ENST00000393559 FCHSD2O94868 740 aa18.13■□□□□ 0.49
LAMB1-202ENST00000393559 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
LAMB1-202ENST00000393559 APAF1O14727 1248 aa18.12■□□□□ 0.49
LAMB1-202ENST00000393559 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
LAMB1-202ENST00000393559 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
LAMB1-202ENST00000393559 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
LAMB1-202ENST00000393559 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
LAMB1-202ENST00000393559 EYA1Q99502 592 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms