RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 IL16Q14005 1332 aa20.61■□□□□ 0.89
PTPA-207ENST00000393370 ATP10BO94823 1461 aa20.61■□□□□ 0.89
PTPA-207ENST00000393370 MX1P20591 662 aa20.61■□□□□ 0.89
PTPA-207ENST00000393370 SMTNL1A8MU46 457 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 CUL4AQ13619 759 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 REC8O95072 547 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 TPM3P06753 285 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 CASC1Q6TDU7 716 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 CERS3Q8IU89 383 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 TRIM34Q9BYJ4 488 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 CALCOCO1Q9P1Z2 691 aa20.6■□□□□ 0.89
PTPA-207ENST00000393370 SYCP2Q9BX26 1530 aa20.59■□□□□ 0.89
PTPA-207ENST00000393370 PTGS1P23219 599 aa20.59■□□□□ 0.89
PTPA-207ENST00000393370 TRERF1Q96PN7 1200 aa20.59■□□□□ 0.89
PTPA-207ENST00000393370 ABCA8O94911 1581 aa20.59■□□□□ 0.89
PTPA-207ENST00000393370 SPAG9O60271 1321 aaKnown RBP20.58■□□□□ 0.89
PTPA-207ENST00000393370 ATAD2Q6PL18 1390 aa20.58■□□□□ 0.88
PTPA-207ENST00000393370 GIMAP6Q6P9H5 292 aa20.57■□□□□ 0.88
PTPA-207ENST00000393370 FUCA2Q9BTY2 467 aa20.57■□□□□ 0.88
PTPA-207ENST00000393370 ST7Q9NRC1 585 aa20.57■□□□□ 0.88
PTPA-207ENST00000393370 VGFO15240 615 aaPredicted RBP20.57■□□□□ 0.88
PTPA-207ENST00000393370 DCTPP1Q9H773 170 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 GOLGA6L6A8MZA4 724 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 ERC2O15083 957 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 TNNT1P13805 278 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
PTPA-207ENST00000393370 KMT5BQ4FZB7 885 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 CNPY2Q9Y2B0 182 aa20.56■□□□□ 0.88
PTPA-207ENST00000393370 MRPL50Q8N5N7 158 aaKnown RBP20.55■□□□□ 0.88
PTPA-207ENST00000393370 CCDC112Q8NEF3 446 aa20.55■□□□□ 0.88
PTPA-207ENST00000393370 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
PTPA-207ENST00000393370 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
PTPA-207ENST00000393370 IRX3P78415 501 aaPredicted RBP20.55■□□□□ 0.88
PTPA-207ENST00000393370 LRMPQ12912 555 aa20.55■□□□□ 0.88
PTPA-207ENST00000393370 TMEM87AQ8NBN3 555 aa20.54■□□□□ 0.88
PTPA-207ENST00000393370 IFT57Q9NWB7 429 aa20.54■□□□□ 0.88
PTPA-207ENST00000393370 MCM2P49736 904 aa20.54■□□□□ 0.88
PTPA-207ENST00000393370 SRCIN1Q9C0H9 1055 aa20.54■□□□□ 0.88
PTPA-207ENST00000393370 FAM53CQ9NYF3 392 aa20.54■□□□□ 0.88
PTPA-207ENST00000393370 YEATS2Q9ULM3 1422 aa20.53■□□□□ 0.88
PTPA-207ENST00000393370 ARHGAP45Q92619 1136 aa20.53■□□□□ 0.88
PTPA-207ENST00000393370 ADGRF5Q8IZF2 1346 aa20.53■□□□□ 0.88
PTPA-207ENST00000393370 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
PTPA-207ENST00000393370 TCHHQ07283 1943 aa20.52■□□□□ 0.88
PTPA-207ENST00000393370 APBB1O00213 710 aa20.52■□□□□ 0.88
PTPA-207ENST00000393370 ABCC4O15439 1325 aa20.52■□□□□ 0.88
PTPA-207ENST00000393370 WDR33Q9C0J8 1336 aaKnown RBP20.52■□□□□ 0.88
PTPA-207ENST00000393370 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.88
PTPA-207ENST00000393370 ZNF397Q8NF99 534 aaPredicted RBP20.52■□□□□ 0.87
PTPA-207ENST00000393370 PAXBP1Q9Y5B6 917 aa20.52■□□□□ 0.87
PTPA-207ENST00000393370 RBM6P78332 1123 aaKnown RBP20.51■□□□□ 0.87
PTPA-207ENST00000393370 PALD1Q9ULE6 856 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 VAMP4O75379 141 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 UBE2HP62256 183 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 CCDC186Q7Z3E2 898 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 AEBP1Q8IUX7 1158 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 TSPYL6Q8N831 410 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTPA-207ENST00000393370 V9GYY5 206 aaPredicted RBP20.51■□□□□ 0.87
PTPA-207ENST00000393370 TRPM2O94759 1503 aa20.51■□□□□ 0.87
PTPA-207ENST00000393370 KIAA1210Q9ULL0 1709 aa20.5■□□□□ 0.87
PTPA-207ENST00000393370 RPAP1Q9BWH6 1393 aaPredicted RBP20.5■□□□□ 0.87
PTPA-207ENST00000393370 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
PTPA-207ENST00000393370 FEZ2Q9UHY8 353 aaPredicted RBP20.5■□□□□ 0.87
PTPA-207ENST00000393370 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
PTPA-207ENST00000393370 HNRNPH2P55795 449 aaKnown RBP20.49■□□□□ 0.87
PTPA-207ENST00000393370 FBXO38Q6PIJ6 1188 aa20.49■□□□□ 0.87
PTPA-207ENST00000393370 NRBP1Q9UHY1 535 aa20.49■□□□□ 0.87
PTPA-207ENST00000393370 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
PTPA-207ENST00000393370 ZNF592Q92610 1267 aa20.48■□□□□ 0.87
PTPA-207ENST00000393370 KNDC1Q76NI1 1749 aa20.48■□□□□ 0.87
PTPA-207ENST00000393370 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
PTPA-207ENST00000393370 ZFP91Q96JP5 570 aaPredicted RBP20.48■□□□□ 0.87
PTPA-207ENST00000393370 UHRF1BP1LA0JNW5 1464 aa20.48■□□□□ 0.87
PTPA-207ENST00000393370 ZBTB9Q96C00 473 aa20.47■□□□□ 0.87
PTPA-207ENST00000393370 ZNF215Q9UL58 517 aaPredicted RBP20.47■□□□□ 0.87
PTPA-207ENST00000393370 ABCA6Q8N139 1617 aa20.47■□□□□ 0.87
PTPA-207ENST00000393370 FIBPO43427 364 aa20.47■□□□□ 0.87
PTPA-207ENST00000393370 CYP2C19P33261 490 aa20.47■□□□□ 0.87
PTPA-207ENST00000393370 UPF3BQ9BZI7 483 aaKnown RBP20.47■□□□□ 0.87
PTPA-207ENST00000393370 RTL1A6NKG5 1358 aa20.47■□□□□ 0.87
PTPA-207ENST00000393370 TSPYL1Q9H0U9 437 aa20.46■□□□□ 0.87
PTPA-207ENST00000393370 TPD52L1Q16890 204 aaPredicted RBP20.46■□□□□ 0.87
PTPA-207ENST00000393370 RGS22Q8NE09 1264 aa20.46■□□□□ 0.87
PTPA-207ENST00000393370 RTF1Q92541 710 aaKnown RBP20.46■□□□□ 0.87
PTPA-207ENST00000393370 MYOM2P54296 1465 aa20.45■□□□□ 0.86
PTPA-207ENST00000393370 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
PTPA-207ENST00000393370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.45■□□□□ 0.86
PTPA-207ENST00000393370 RAD51AP2Q09MP3 1159 aa20.45■□□□□ 0.86
PTPA-207ENST00000393370 ZSCAN25Q6NSZ9 544 aa20.45■□□□□ 0.86
PTPA-207ENST00000393370 USP32Q8NFA0 1604 aa20.44■□□□□ 0.86
PTPA-207ENST00000393370 CEP135Q66GS9 1140 aa20.44■□□□□ 0.86
PTPA-207ENST00000393370 NOL10Q9BSC4 688 aaKnown RBP20.44■□□□□ 0.86
PTPA-207ENST00000393370 ELF2Q15723 593 aa20.44■□□□□ 0.86
PTPA-207ENST00000393370 DRC7Q8IY82 874 aa20.44■□□□□ 0.86
PTPA-207ENST00000393370 KIF1BPQ96EK5 621 aa20.44■□□□□ 0.86
PTPA-207ENST00000393370 ZNF446Q9NWS9 450 aa20.44■□□□□ 0.86
PTPA-207ENST00000393370 FAM193AP78312 1265 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms