RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
SYT1-202ENST00000393240 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
SYT1-202ENST00000393240 ABCC6O95255 1503 aa12.45□□□□□ -0.42
SYT1-202ENST00000393240 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
SYT1-202ENST00000393240 ZC3H6P61129 1189 aaKnown RBP12.44□□□□□ -0.42
SYT1-202ENST00000393240 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
SYT1-202ENST00000393240 CPDO75976 1380 aa12.44□□□□□ -0.42
SYT1-202ENST00000393240 KIAA0232Q92628 1395 aa12.44□□□□□ -0.42
SYT1-202ENST00000393240 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
SYT1-202ENST00000393240 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
SYT1-202ENST00000393240 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
SYT1-202ENST00000393240 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 ERBB3P21860 1342 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
SYT1-202ENST00000393240 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
SYT1-202ENST00000393240 NOB1Q9ULX3 412 aaKnown RBP12.43□□□□□ -0.42
SYT1-202ENST00000393240 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
SYT1-202ENST00000393240 ARHGAP45Q92619 1136 aa12.42□□□□□ -0.42
SYT1-202ENST00000393240 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
SYT1-202ENST00000393240 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
SYT1-202ENST00000393240 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
SYT1-202ENST00000393240 RLBP1P12271 317 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
SYT1-202ENST00000393240 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 TRIM27P14373 513 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 CRYBG1Q9Y4K1 1723 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
SYT1-202ENST00000393240 MVPQ14764 893 aaKnown RBP12.41□□□□□ -0.42
SYT1-202ENST00000393240 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
SYT1-202ENST00000393240 FTSJ3Q8IY81 847 aaKnown RBP12.41□□□□□ -0.42
SYT1-202ENST00000393240 KDM2BQ8NHM5 1336 aa12.4□□□□□ -0.42
SYT1-202ENST00000393240 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
SYT1-202ENST00000393240 TSPYL4Q9UJ04 414 aa12.4□□□□□ -0.42
SYT1-202ENST00000393240 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
SYT1-202ENST00000393240 COL18A1P39060 1754 aa12.4□□□□□ -0.43
SYT1-202ENST00000393240 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.43
SYT1-202ENST00000393240 LRRC37A3O60309 1634 aa12.4□□□□□ -0.43
SYT1-202ENST00000393240 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
SYT1-202ENST00000393240 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
SYT1-202ENST00000393240 TAF7Q15545 349 aaPredicted RBP12.39□□□□□ -0.43
SYT1-202ENST00000393240 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
SYT1-202ENST00000393240 NHSL1Q5SYE7 1610 aa12.38□□□□□ -0.43
SYT1-202ENST00000393240 DDX19BQ9UMR2 479 aa12.38□□□□□ -0.43
SYT1-202ENST00000393240 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
SYT1-202ENST00000393240 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
SYT1-202ENST00000393240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
SYT1-202ENST00000393240 MIS18AQ9NYP9 233 aa12.37□□□□□ -0.43
SYT1-202ENST00000393240 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
SYT1-202ENST00000393240 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
SYT1-202ENST00000393240 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
SYT1-202ENST00000393240 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
SYT1-202ENST00000393240 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
SYT1-202ENST00000393240 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
SYT1-202ENST00000393240 CSB-PGBD3P0DP91 1061 aa12.35□□□□□ -0.43
SYT1-202ENST00000393240 KRT24Q2M2I5 525 aa12.35□□□□□ -0.43
SYT1-202ENST00000393240 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
SYT1-202ENST00000393240 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
SYT1-202ENST00000393240 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
SYT1-202ENST00000393240 PRDM11Q9NQV5 511 aa12.35□□□□□ -0.43
SYT1-202ENST00000393240 TATP17735 454 aaPredicted RBP12.35□□□□□ -0.43
SYT1-202ENST00000393240 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
SYT1-202ENST00000393240 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
SYT1-202ENST00000393240 RGPD5Q99666 1765 aa12.34□□□□□ -0.43
SYT1-202ENST00000393240 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
SYT1-202ENST00000393240 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
SYT1-202ENST00000393240 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
SYT1-202ENST00000393240 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
SYT1-202ENST00000393240 ABCC4O15439 1325 aa12.33□□□□□ -0.44
SYT1-202ENST00000393240 PTPRCP08575 1304 aa12.33□□□□□ -0.44
SYT1-202ENST00000393240 IGHDP01880 384 aa12.33□□□□□ -0.44
SYT1-202ENST00000393240 TEFQ10587 303 aa12.33□□□□□ -0.44
SYT1-202ENST00000393240 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
SYT1-202ENST00000393240 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
SYT1-202ENST00000393240 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
SYT1-202ENST00000393240 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
SYT1-202ENST00000393240 ZBTB40Q9NUA8 1239 aa12.32□□□□□ -0.44
SYT1-202ENST00000393240 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
SYT1-202ENST00000393240 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
SYT1-202ENST00000393240 HOXB7P09629 217 aa12.31□□□□□ -0.44
SYT1-202ENST00000393240 CCDC30Q5VVM6 783 aa12.31□□□□□ -0.44
SYT1-202ENST00000393240 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
SYT1-202ENST00000393240 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
SYT1-202ENST00000393240 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 ZBTB7BO15156 539 aaPredicted RBP12.3□□□□□ -0.44
SYT1-202ENST00000393240 EIF4A1P60842 406 aaKnown RBP12.3□□□□□ -0.44
SYT1-202ENST00000393240 ABCA3Q99758 1704 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 MEGF6O75095 1541 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 PHKG2P15735 406 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 ROBO1Q9Y6N7 1651 aa12.3□□□□□ -0.44
SYT1-202ENST00000393240 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
SYT1-202ENST00000393240 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms