RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
CASP4-201ENST00000393150 ZNF784Q8NCA9 323 aaPredicted RBP11.63□□□□□ -0.55
CASP4-201ENST00000393150 PRAM1Q96QH2 718 aa11.63□□□□□ -0.55
CASP4-201ENST00000393150 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
CASP4-201ENST00000393150 PDIA6Q15084 440 aa11.62□□□□□ -0.55
CASP4-201ENST00000393150 ANKARQ7Z5J8 1434 aa11.62□□□□□ -0.55
CASP4-201ENST00000393150 COL14A1Q05707 1796 aaKnown RBP11.62□□□□□ -0.55
CASP4-201ENST00000393150 MLLT3P42568 568 aaPredicted RBP11.61□□□□□ -0.55
CASP4-201ENST00000393150 C1QTNF8P60827 252 aa11.61□□□□□ -0.55
CASP4-201ENST00000393150 BARGINQ6ZT62 677 aa11.61□□□□□ -0.55
CASP4-201ENST00000393150 TCP11L2Q8N4U5 519 aa11.61□□□□□ -0.55
CASP4-201ENST00000393150 FMN2Q9NZ56 1722 aa11.61□□□□□ -0.55
CASP4-201ENST00000393150 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
CASP4-201ENST00000393150 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
CASP4-201ENST00000393150 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
CASP4-201ENST00000393150 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
CASP4-201ENST00000393150 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
CASP4-201ENST00000393150 PPLO60437 1756 aa11.6□□□□□ -0.55
CASP4-201ENST00000393150 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
CASP4-201ENST00000393150 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
CASP4-201ENST00000393150 CHRNA2Q15822 529 aa11.59□□□□□ -0.55
CASP4-201ENST00000393150 KIAA0232Q92628 1395 aa11.58□□□□□ -0.56
CASP4-201ENST00000393150 PLSCR1O15162 318 aa11.57□□□□□ -0.56
CASP4-201ENST00000393150 GIGYF1O75420 1035 aaPredicted RBP11.57□□□□□ -0.56
CASP4-201ENST00000393150 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
CASP4-201ENST00000393150 HIRIP3Q9BW71 556 aaPredicted RBP11.57□□□□□ -0.56
CASP4-201ENST00000393150 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
CASP4-201ENST00000393150 ZBTB7AO95365 584 aa11.56□□□□□ -0.56
CASP4-201ENST00000393150 PCDH10Q9P2E7 1040 aa11.56□□□□□ -0.56
CASP4-201ENST00000393150 MINK1Q8N4C8 1332 aaPredicted RBP11.56□□□□□ -0.56
CASP4-201ENST00000393150 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
CASP4-201ENST00000393150 KNDC1Q76NI1 1749 aa11.55□□□□□ -0.56
CASP4-201ENST00000393150 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
CASP4-201ENST00000393150 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
CASP4-201ENST00000393150 GPR162Q16538 588 aa11.55□□□□□ -0.56
CASP4-201ENST00000393150 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
CASP4-201ENST00000393150 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
CASP4-201ENST00000393150 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
CASP4-201ENST00000393150 NRAPQ86VF7 1730 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 TNS1Q9HBL0 1735 aaKnown RBP11.54□□□□□ -0.56
CASP4-201ENST00000393150 DDB1Q16531 1140 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 SMYD5Q6GMV2 418 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 ABTB2Q8N961 1025 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
CASP4-201ENST00000393150 SYT17Q9BSW7 474 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 TRAK1Q9UPV9 953 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 THSD7AQ9UPZ6 1657 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 IFT172Q9UG01 1749 aa11.54□□□□□ -0.56
CASP4-201ENST00000393150 RGPD8O14715 1765 aaPredicted RBP11.53□□□□□ -0.56
CASP4-201ENST00000393150 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
CASP4-201ENST00000393150 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
CASP4-201ENST00000393150 LARP1Q6PKG0 1096 aaKnown RBP11.53□□□□□ -0.56
CASP4-201ENST00000393150 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
CASP4-201ENST00000393150 ABCA3Q99758 1704 aa11.52□□□□□ -0.56
CASP4-201ENST00000393150 SSH2Q76I76 1423 aa11.52□□□□□ -0.57
CASP4-201ENST00000393150 SLC34A2O95436 690 aa11.52□□□□□ -0.57
CASP4-201ENST00000393150 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
CASP4-201ENST00000393150 MPHOSPH9Q99550 1183 aa11.52□□□□□ -0.57
CASP4-201ENST00000393150 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
CASP4-201ENST00000393150 MTFR1LQ9H019 292 aa11.52□□□□□ -0.57
CASP4-201ENST00000393150 OVOS2A0A0G2JMS6 1433 aa11.51□□□□□ -0.57
CASP4-201ENST00000393150 OVOS2A0A0J9YW53 1432 aa11.51□□□□□ -0.57
CASP4-201ENST00000393150 OVOS2Q6IE36 1432 aa11.51□□□□□ -0.57
CASP4-201ENST00000393150 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
CASP4-201ENST00000393150 RBM26Q5T8P6 1007 aaKnown RBP11.51□□□□□ -0.57
CASP4-201ENST00000393150 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
CASP4-201ENST00000393150 SPATA31E1Q6ZUB1 1445 aa11.5□□□□□ -0.57
CASP4-201ENST00000393150 NUDT16Q96DE0 195 aaKnown RBP11.5□□□□□ -0.57
CASP4-201ENST00000393150 ARXQ96QS3 562 aa11.5□□□□□ -0.57
CASP4-201ENST00000393150 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
CASP4-201ENST00000393150 ATP7BP35670 1465 aa11.49□□□□□ -0.57
CASP4-201ENST00000393150 SLC15A2Q16348 729 aa11.48□□□□□ -0.57
CASP4-201ENST00000393150 STAC3Q96MF2 364 aa11.48□□□□□ -0.57
CASP4-201ENST00000393150 RREB1Q92766 1687 aa11.48□□□□□ -0.57
CASP4-201ENST00000393150 DLC1Q96QB1 1528 aa11.47□□□□□ -0.57
CASP4-201ENST00000393150 TULP4Q9NRJ4 1543 aa11.47□□□□□ -0.57
CASP4-201ENST00000393150 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
CASP4-201ENST00000393150 POLD1P28340 1107 aa11.47□□□□□ -0.57
CASP4-201ENST00000393150 PTGER2P43116 358 aa11.47□□□□□ -0.57
CASP4-201ENST00000393150 PRR36Q9H6K5 1346 aa11.46□□□□□ -0.57
CASP4-201ENST00000393150 ALS2Q96Q42 1657 aa11.46□□□□□ -0.57
CASP4-201ENST00000393150 EXOC5O00471 708 aa11.46□□□□□ -0.57
CASP4-201ENST00000393150 GCP02774 474 aa11.46□□□□□ -0.57
CASP4-201ENST00000393150 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.57
CASP4-201ENST00000393150 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
CASP4-201ENST00000393150 UTRNP46939 3433 aa11.46□□□□□ -0.57
CASP4-201ENST00000393150 CPDO75976 1380 aa11.46□□□□□ -0.58
CASP4-201ENST00000393150 GRIN3BO60391 1043 aa11.45□□□□□ -0.58
CASP4-201ENST00000393150 EVI5O60447 810 aa11.45□□□□□ -0.58
CASP4-201ENST00000393150 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
CASP4-201ENST00000393150 CRB1P82279 1406 aa11.45□□□□□ -0.58
CASP4-201ENST00000393150 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
CASP4-201ENST00000393150 TRPM3Q9HCF6 1732 aaPredicted RBP11.45□□□□□ -0.58
CASP4-201ENST00000393150 CHD4Q14839 1912 aa11.45□□□□□ -0.58
CASP4-201ENST00000393150 ACEP12821 1306 aa11.44□□□□□ -0.58
CASP4-201ENST00000393150 NRKQ7Z2Y5 1582 aa11.44□□□□□ -0.58
CASP4-201ENST00000393150 ZMYND10O75800 440 aa11.44□□□□□ -0.58
CASP4-201ENST00000393150 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
CASP4-201ENST00000393150 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
CASP4-201ENST00000393150 TBC1D12O60347 775 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms