RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 LRRC37A3O60309 1634 aa18.02■□□□□ 0.48
PTN-202ENST00000393083 COL3A1P02461 1466 aaPredicted RBP18.02■□□□□ 0.48
PTN-202ENST00000393083 PDE3BQ13370 1112 aa18■□□□□ 0.47
PTN-202ENST00000393083 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
PTN-202ENST00000393083 MEGF6O75095 1541 aa18■□□□□ 0.47
PTN-202ENST00000393083 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
PTN-202ENST00000393083 EP400Q96L91 3159 aa18■□□□□ 0.47
PTN-202ENST00000393083 EXOC5O00471 708 aa18■□□□□ 0.47
PTN-202ENST00000393083 FAM182BQ5T319 152 aa18■□□□□ 0.47
PTN-202ENST00000393083 TNS2Q63HR2 1409 aa17.99■□□□□ 0.47
PTN-202ENST00000393083 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
PTN-202ENST00000393083 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
PTN-202ENST00000393083 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
PTN-202ENST00000393083 RGPD1P0DJD0 1748 aa17.97■□□□□ 0.47
PTN-202ENST00000393083 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
PTN-202ENST00000393083 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTN-202ENST00000393083 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
PTN-202ENST00000393083 TATP17735 454 aaPredicted RBP17.96■□□□□ 0.46
PTN-202ENST00000393083 FAM196AQ6ZSG2 479 aa17.95■□□□□ 0.46
PTN-202ENST00000393083 AEBP1Q8IUX7 1158 aa17.95■□□□□ 0.46
PTN-202ENST00000393083 KDRP35968 1356 aa17.94■□□□□ 0.46
PTN-202ENST00000393083 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
PTN-202ENST00000393083 BCL9O00512 1426 aa17.93■□□□□ 0.46
PTN-202ENST00000393083 SULT6B1Q6IMI4 303 aa17.93■□□□□ 0.46
PTN-202ENST00000393083 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
PTN-202ENST00000393083 SHANK3Q9BYB0 1731 aa17.91■□□□□ 0.46
PTN-202ENST00000393083 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
PTN-202ENST00000393083 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
PTN-202ENST00000393083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.91■□□□□ 0.46
PTN-202ENST00000393083 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
PTN-202ENST00000393083 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
PTN-202ENST00000393083 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
PTN-202ENST00000393083 HMOX1P09601 288 aa17.89■□□□□ 0.45
PTN-202ENST00000393083 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.45
PTN-202ENST00000393083 CCDC125Q86Z20 511 aa17.89■□□□□ 0.45
PTN-202ENST00000393083 CYP27B1O15528 508 aa17.88■□□□□ 0.45
PTN-202ENST00000393083 SPG7Q9UQ90 795 aa17.88■□□□□ 0.45
PTN-202ENST00000393083 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
PTN-202ENST00000393083 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
PTN-202ENST00000393083 TRIM37O94972 964 aa17.87■□□□□ 0.45
PTN-202ENST00000393083 U2AF1L5P0DN76 240 aaPredicted RBP17.87■□□□□ 0.45
PTN-202ENST00000393083 U2AF1Q01081 240 aaKnown RBP eCLIP17.87■□□□□ 0.45
PTN-202ENST00000393083 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
PTN-202ENST00000393083 AMOTQ4VCS5 1084 aa17.85■□□□□ 0.45
PTN-202ENST00000393083 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
PTN-202ENST00000393083 PTF1AQ7RTS3 328 aa17.85■□□□□ 0.45
PTN-202ENST00000393083 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
PTN-202ENST00000393083 SBF2Q86WG5 1849 aa17.84■□□□□ 0.45
PTN-202ENST00000393083 APAF1O14727 1248 aa17.84■□□□□ 0.45
PTN-202ENST00000393083 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
PTN-202ENST00000393083 PHKG2P15735 406 aa17.83■□□□□ 0.45
PTN-202ENST00000393083 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.45
PTN-202ENST00000393083 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.45
PTN-202ENST00000393083 KCNQ2O43526 872 aa17.83■□□□□ 0.44
PTN-202ENST00000393083 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
PTN-202ENST00000393083 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
PTN-202ENST00000393083 TNS1Q9HBL0 1735 aaKnown RBP17.82■□□□□ 0.44
PTN-202ENST00000393083 FCHSD2O94868 740 aa17.82■□□□□ 0.44
PTN-202ENST00000393083 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
PTN-202ENST00000393083 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
PTN-202ENST00000393083 MTHFSDQ2M296 383 aaKnown RBP17.8■□□□□ 0.44
PTN-202ENST00000393083 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
PTN-202ENST00000393083 DEFB132Q7Z7B7 95 aa17.8■□□□□ 0.44
PTN-202ENST00000393083 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
PTN-202ENST00000393083 NHSQ6T4R5 1651 aa17.8■□□□□ 0.44
PTN-202ENST00000393083 PRIM1P49642 420 aaKnown RBP17.79■□□□□ 0.44
PTN-202ENST00000393083 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
PTN-202ENST00000393083 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
PTN-202ENST00000393083 APBA3O96018 575 aa17.79■□□□□ 0.44
PTN-202ENST00000393083 DLG5Q8TDM6 1919 aa17.79■□□□□ 0.44
PTN-202ENST00000393083 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
PTN-202ENST00000393083 BAG6P46379 1132 aa17.78■□□□□ 0.44
PTN-202ENST00000393083 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
PTN-202ENST00000393083 DOT1LQ8TEK3 1739 aa17.77■□□□□ 0.44
PTN-202ENST00000393083 EN1Q05925 392 aaPredicted RBP17.77■□□□□ 0.44
PTN-202ENST00000393083 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
PTN-202ENST00000393083 TOGARAM1Q9Y4F4 1720 aa17.76■□□□□ 0.43
PTN-202ENST00000393083 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
PTN-202ENST00000393083 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
PTN-202ENST00000393083 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
PTN-202ENST00000393083 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
PTN-202ENST00000393083 CAMKK2Q96RR4 588 aa17.76■□□□□ 0.43
PTN-202ENST00000393083 RRP7AQ9Y3A4 280 aaKnown RBP17.76■□□□□ 0.43
PTN-202ENST00000393083 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
PTN-202ENST00000393083 PLSCR1O15162 318 aa17.75■□□□□ 0.43
PTN-202ENST00000393083 DCAF5Q96JK2 942 aa17.75■□□□□ 0.43
PTN-202ENST00000393083 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
PTN-202ENST00000393083 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
PTN-202ENST00000393083 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
PTN-202ENST00000393083 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
PTN-202ENST00000393083 EZH2Q15910 746 aaKnown RBP17.74■□□□□ 0.43
PTN-202ENST00000393083 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
PTN-202ENST00000393083 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
PTN-202ENST00000393083 NEFMP07197 916 aa17.73■□□□□ 0.43
PTN-202ENST00000393083 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
PTN-202ENST00000393083 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
PTN-202ENST00000393083 BTAF1O14981 1849 aa17.72■□□□□ 0.43
PTN-202ENST00000393083 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
PTN-202ENST00000393083 PIGBQ92521 554 aa17.72■□□□□ 0.43
PTN-202ENST00000393083 NEFLP07196 543 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms