RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 KRT28Q7Z3Y7 464 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 SLIT3O75094 1523 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 RTL1A6NKG5 1358 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 MSH6P52701 1360 aa11.87□□□□□ -0.51
USP30-203ENST00000392784 GCP02774 474 aa11.86□□□□□ -0.51
USP30-203ENST00000392784 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
USP30-203ENST00000392784 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
USP30-203ENST00000392784 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
USP30-203ENST00000392784 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
USP30-203ENST00000392784 IPO8O15397 1037 aaKnown RBP11.85□□□□□ -0.51
USP30-203ENST00000392784 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
USP30-203ENST00000392784 MED1Q15648 1581 aaPredicted RBP11.85□□□□□ -0.51
USP30-203ENST00000392784 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
USP30-203ENST00000392784 ZNF428Q96B54 188 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 AXIN2Q9Y2T1 843 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 ATF3P18847 181 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 IL17REQ8NFR9 667 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
USP30-203ENST00000392784 VIRMAQ69YN4 1812 aaKnown RBP11.83□□□□□ -0.52
USP30-203ENST00000392784 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
USP30-203ENST00000392784 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
USP30-203ENST00000392784 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
USP30-203ENST00000392784 USP19O94966 1318 aa11.83□□□□□ -0.52
USP30-203ENST00000392784 AAMPQ13685 434 aa11.83□□□□□ -0.52
USP30-203ENST00000392784 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
USP30-203ENST00000392784 RGS12O14924 1447 aa11.82□□□□□ -0.52
USP30-203ENST00000392784 ABCC4O15439 1325 aa11.82□□□□□ -0.52
USP30-203ENST00000392784 ZC3H6P61129 1189 aaKnown RBP11.82□□□□□ -0.52
USP30-203ENST00000392784 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
USP30-203ENST00000392784 CABLES1Q8TDN4 633 aa11.82□□□□□ -0.52
USP30-203ENST00000392784 RWDD1Q9H446 243 aaPredicted RBP11.82□□□□□ -0.52
USP30-203ENST00000392784 KIAA0232Q92628 1395 aa11.81□□□□□ -0.52
USP30-203ENST00000392784 ARHGAP45Q92619 1136 aa11.81□□□□□ -0.52
USP30-203ENST00000392784 ZBTB7BO15156 539 aaPredicted RBP11.81□□□□□ -0.52
USP30-203ENST00000392784 PXDNQ92626 1479 aa11.8□□□□□ -0.52
USP30-203ENST00000392784 ANKRD24Q8TF21 1146 aa11.8□□□□□ -0.52
USP30-203ENST00000392784 ZNF335Q9H4Z2 1342 aaPredicted RBP11.8□□□□□ -0.52
USP30-203ENST00000392784 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
USP30-203ENST00000392784 G2E3Q7L622 706 aa11.8□□□□□ -0.52
USP30-203ENST00000392784 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
USP30-203ENST00000392784 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
USP30-203ENST00000392784 DCCP43146 1447 aa11.8□□□□□ -0.52
USP30-203ENST00000392784 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
USP30-203ENST00000392784 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
USP30-203ENST00000392784 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
USP30-203ENST00000392784 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
USP30-203ENST00000392784 CRYBG1Q9Y4K1 1723 aa11.78□□□□□ -0.52
USP30-203ENST00000392784 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
USP30-203ENST00000392784 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
USP30-203ENST00000392784 COL18A1P39060 1754 aa11.78□□□□□ -0.52
USP30-203ENST00000392784 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
USP30-203ENST00000392784 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
USP30-203ENST00000392784 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
USP30-203ENST00000392784 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
USP30-203ENST00000392784 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.53
USP30-203ENST00000392784 SEC24BO95487 1268 aa11.77□□□□□ -0.53
USP30-203ENST00000392784 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.53
USP30-203ENST00000392784 NCOA3Q9Y6Q9 1424 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 F6X3S4 739 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
USP30-203ENST00000392784 MPRIPQ6WCQ1 1025 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 KCNQ3O43525 872 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 TAF7Q15545 349 aaPredicted RBP11.76□□□□□ -0.53
USP30-203ENST00000392784 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 SMC5Q8IY18 1101 aa11.76□□□□□ -0.53
USP30-203ENST00000392784 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
USP30-203ENST00000392784 ERBB3P21860 1342 aa11.75□□□□□ -0.53
USP30-203ENST00000392784 NPHP3Q7Z494 1330 aa11.75□□□□□ -0.53
USP30-203ENST00000392784 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
USP30-203ENST00000392784 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
USP30-203ENST00000392784 ANP32EQ9BTT0 268 aa11.74□□□□□ -0.53
USP30-203ENST00000392784 SPATA31A3Q5VYP0 1347 aa11.73□□□□□ -0.53
USP30-203ENST00000392784 MEIS3Q99687 375 aa11.73□□□□□ -0.53
USP30-203ENST00000392784 LNPKQ9C0E8 428 aa11.73□□□□□ -0.53
USP30-203ENST00000392784 CACNA1FO60840 1977 aa11.73□□□□□ -0.53
USP30-203ENST00000392784 SLC4A10Q6U841 1118 aa11.72□□□□□ -0.53
USP30-203ENST00000392784 PTPRCP08575 1304 aa11.72□□□□□ -0.53
USP30-203ENST00000392784 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
USP30-203ENST00000392784 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
USP30-203ENST00000392784 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
USP30-203ENST00000392784 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
USP30-203ENST00000392784 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
USP30-203ENST00000392784 MEGF6O75095 1541 aa11.72□□□□□ -0.53
USP30-203ENST00000392784 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
USP30-203ENST00000392784 NUCB1Q02818 461 aa11.71□□□□□ -0.53
USP30-203ENST00000392784 RNMTO43148 476 aaKnown RBP11.71□□□□□ -0.53
USP30-203ENST00000392784 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
USP30-203ENST00000392784 FLIIQ13045 1269 aa11.7□□□□□ -0.54
USP30-203ENST00000392784 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms