RNA–Protein interactions for RNA: ENST00000392386.7

CRLF1-201, Transcript of cytokine receptor like factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF1, Length 1,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1-201ENST00000392386 ZCRB1Q8TBF4 217 aaKnown RBP30.89■■■□□ 2.54
CRLF1-201ENST00000392386 ANP32CO43423 234 aa30.87■■■□□ 2.53
CRLF1-201ENST00000392386 NUDCQ9Y266 331 aa30.87■■■□□ 2.53
CRLF1-201ENST00000392386 HMOX1P09601 288 aa30.86■■■□□ 2.53
CRLF1-201ENST00000392386 DDX54Q8TDD1 881 aaKnown RBP30.85■■■□□ 2.53
CRLF1-201ENST00000392386 KDRP35968 1356 aa30.85■■■□□ 2.53
CRLF1-201ENST00000392386 SOCS7O14512 581 aa30.84■■■□□ 2.53
CRLF1-201ENST00000392386 FAM196AQ6ZSG2 479 aa30.84■■■□□ 2.53
CRLF1-201ENST00000392386 UPF1Q92900 1129 aaKnown RBP eCLIP30.79■■■□□ 2.524e-11■■■■■ 49.6
CRLF1-201ENST00000392386 SPG7Q9UQ90 795 aa30.79■■■□□ 2.52
CRLF1-201ENST00000392386 SHANK3Q9BYB0 1731 aa30.79■■■□□ 2.52
CRLF1-201ENST00000392386 U2AF1L5P0DN76 240 aaPredicted RBP30.79■■■□□ 2.52
CRLF1-201ENST00000392386 U2AF1Q01081 240 aaKnown RBP eCLIP30.79■■■□□ 2.52
CRLF1-201ENST00000392386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.79■■■□□ 2.52
CRLF1-201ENST00000392386 PKD1L3Q7Z443 1732 aa30.78■■■□□ 2.52
CRLF1-201ENST00000392386 PCDH11XQ9BZA7 1347 aa30.77■■■□□ 2.52
CRLF1-201ENST00000392386 PCDH11YQ9BZA8 1340 aa30.77■■■□□ 2.52
CRLF1-201ENST00000392386 PLEKHG2Q9H7P9 1386 aa30.77■■■□□ 2.52
CRLF1-201ENST00000392386 PLEKHO1Q53GL0 409 aaPredicted RBP30.75■■■□□ 2.51
CRLF1-201ENST00000392386 CYP27B1O15528 508 aa30.74■■■□□ 2.51
CRLF1-201ENST00000392386 AMOTQ4VCS5 1084 aa30.74■■■□□ 2.51
CRLF1-201ENST00000392386 TRIM37O94972 964 aa30.73■■■□□ 2.51
CRLF1-201ENST00000392386 BCL9O00512 1426 aa30.73■■■□□ 2.51
CRLF1-201ENST00000392386 RSPH6AQ9H0K4 717 aa30.72■■■□□ 2.51
CRLF1-201ENST00000392386 FCHSD2O94868 740 aa30.69■■■□□ 2.5
CRLF1-201ENST00000392386 PRKAR2BP31323 418 aa30.69■■■□□ 2.5
CRLF1-201ENST00000392386 CCDC125Q86Z20 511 aa30.69■■■□□ 2.5
CRLF1-201ENST00000392386 PHKG2P15735 406 aa30.69■■■□□ 2.5
CRLF1-201ENST00000392386 ZNF530Q6P9A1 599 aaPredicted RBP30.69■■■□□ 2.5
CRLF1-201ENST00000392386 IFNL2Q8IZJ0 200 aa30.69■■■□□ 2.5
CRLF1-201ENST00000392386 ACSBG1Q96GR2 724 aa30.69■■■□□ 2.5
CRLF1-201ENST00000392386 SBF2Q86WG5 1849 aa30.68■■■□□ 2.5
CRLF1-201ENST00000392386 CCDC184Q52MB2 194 aa30.67■■■□□ 2.5
CRLF1-201ENST00000392386 SF3B2Q13435 895 aaKnown RBP30.66■■■□□ 2.5
CRLF1-201ENST00000392386 KCNQ2O43526 872 aa30.65■■■□□ 2.5
CRLF1-201ENST00000392386 NKX1-1Q15270 411 aaPredicted RBP30.64■■■□□ 2.5
CRLF1-201ENST00000392386 MTHFSDQ2M296 383 aaKnown RBP30.64■■■□□ 2.5
CRLF1-201ENST00000392386 PTF1AQ7RTS3 328 aa30.64■■■□□ 2.5
CRLF1-201ENST00000392386 KAT6BQ8WYB5 2073 aa30.64■■■□□ 2.5
CRLF1-201ENST00000392386 WDR43Q15061 677 aaKnown RBP eCLIP30.64■■■□□ 2.49
CRLF1-201ENST00000392386 PHACTR3Q96KR7 559 aa30.64■■■□□ 2.49
CRLF1-201ENST00000392386 BCL11BQ9C0K0 894 aaPredicted RBP30.64■■■□□ 2.49
CRLF1-201ENST00000392386 C1orf141Q5JVX7 400 aa30.63■■■□□ 2.49
CRLF1-201ENST00000392386 DIEXFQ68CQ4 756 aaKnown RBP30.63■■■□□ 2.49
CRLF1-201ENST00000392386 PRIM1P49642 420 aaKnown RBP30.61■■■□□ 2.49
CRLF1-201ENST00000392386 TNS1Q9HBL0 1735 aaKnown RBP30.6■■■□□ 2.49
CRLF1-201ENST00000392386 SYTL4Q96C24 671 aaPredicted RBP30.6■■■□□ 2.49
CRLF1-201ENST00000392386 MRS2Q9HD23 443 aa30.6■■■□□ 2.49
CRLF1-201ENST00000392386 DOT1LQ8TEK3 1739 aa30.6■■■□□ 2.49
CRLF1-201ENST00000392386 APBA3O96018 575 aa30.59■■■□□ 2.49
CRLF1-201ENST00000392386 NHSQ6T4R5 1651 aa30.59■■■□□ 2.49
CRLF1-201ENST00000392386 HSP90AB1P08238 724 aaKnown RBP30.59■■■□□ 2.49
CRLF1-201ENST00000392386 AKAP4Q5JQC9 854 aa30.59■■■□□ 2.49
CRLF1-201ENST00000392386 PNNQ9H307 717 aaKnown RBP30.59■■■□□ 2.49
CRLF1-201ENST00000392386 GAS2L2Q8NHY3 880 aa30.58■■■□□ 2.49
CRLF1-201ENST00000392386 PLEKHF1Q96S99 279 aa30.58■■■□□ 2.49
CRLF1-201ENST00000392386 ADAMTS8Q9UP79 889 aa30.58■■■□□ 2.49
CRLF1-201ENST00000392386 NEFMP07197 916 aa30.56■■■□□ 2.48
CRLF1-201ENST00000392386 DEFB132Q7Z7B7 95 aa30.56■■■□□ 2.48
CRLF1-201ENST00000392386 DCAF5Q96JK2 942 aa30.56■■■□□ 2.48
CRLF1-201ENST00000392386 MPRIPQ6WCQ1 1025 aa30.56■■■□□ 2.48
CRLF1-201ENST00000392386 BAG6P46379 1132 aa30.55■■■□□ 2.48
CRLF1-201ENST00000392386 TOGARAM1Q9Y4F4 1720 aa30.54■■■□□ 2.48
CRLF1-201ENST00000392386 KDM6AO15550 1401 aaPredicted RBP30.53■■■□□ 2.48
CRLF1-201ENST00000392386 EN1Q05925 392 aaPredicted RBP30.52■■■□□ 2.48
CRLF1-201ENST00000392386 MAPK8IP3Q9UPT6 1336 aa30.52■■■□□ 2.48
CRLF1-201ENST00000392386 PNISRQ8TF01 805 aaKnown RBP30.51■■■□□ 2.47
CRLF1-201ENST00000392386 BTAF1O14981 1849 aa30.5■■■□□ 2.47
CRLF1-201ENST00000392386 GNAT3A8MTJ3 354 aa30.5■■■□□ 2.47
CRLF1-201ENST00000392386 CCDC146Q8IYE0 955 aa30.5■■■□□ 2.47
CRLF1-201ENST00000392386 MAP3K5Q99683 1374 aa30.49■■■□□ 2.47
CRLF1-201ENST00000392386 ERVV-2B6SEH9 535 aa30.49■■■□□ 2.47
CRLF1-201ENST00000392386 LGR6Q9HBX8 967 aa30.49■■■□□ 2.47
CRLF1-201ENST00000392386 ITGB4P16144 1822 aa30.49■■■□□ 2.47
CRLF1-201ENST00000392386 TMOD3Q9NYL9 352 aa30.48■■■□□ 2.47
CRLF1-201ENST00000392386 PLSCR1O15162 318 aa30.47■■■□□ 2.47
CRLF1-201ENST00000392386 RNMTO43148 476 aaKnown RBP30.47■■■□□ 2.47
CRLF1-201ENST00000392386 PIGBQ92521 554 aa30.47■■■□□ 2.47
CRLF1-201ENST00000392386 RUNDC1Q96C34 613 aa30.46■■■□□ 2.47
CRLF1-201ENST00000392386 CAMKK2Q96RR4 588 aa30.46■■■□□ 2.47
CRLF1-201ENST00000392386 SCN11AQ9UI33 1791 aa30.46■■■□□ 2.47
CRLF1-201ENST00000392386 CABP4P57796 275 aa30.46■■■□□ 2.47
CRLF1-201ENST00000392386 EZH2Q15910 746 aaKnown RBP30.46■■■□□ 2.47
CRLF1-201ENST00000392386 NFE2L2Q16236 605 aa30.45■■■□□ 2.46
CRLF1-201ENST00000392386 NFATC2IPQ8NCF5 419 aa30.43■■■□□ 2.46
CRLF1-201ENST00000392386 IL17REQ8NFR9 667 aa30.43■■■□□ 2.46
CRLF1-201ENST00000392386 VIRMAQ69YN4 1812 aaKnown RBP30.42■■■□□ 2.46
CRLF1-201ENST00000392386 ADAMTS7Q9UKP4 1686 aa30.41■■■□□ 2.46
CRLF1-201ENST00000392386 MIER1Q8N108 512 aa30.41■■■□□ 2.46
CRLF1-201ENST00000392386 RTF1Q92541 710 aaKnown RBP30.41■■■□□ 2.46
CRLF1-201ENST00000392386 SLC52A2Q9HAB3 445 aa30.4■■■□□ 2.46
CRLF1-201ENST00000392386 CCER2I3L3R5 266 aa30.38■■■□□ 2.45
CRLF1-201ENST00000392386 HTATSF1O43719 755 aaKnown RBP30.38■■■□□ 2.45
CRLF1-201ENST00000392386 TMPOP42166 694 aaKnown RBP30.38■■■□□ 2.45
CRLF1-201ENST00000392386 DLG5Q8TDM6 1919 aa30.38■■■□□ 2.45
CRLF1-201ENST00000392386 RGPD3A6NKT7 1758 aaPredicted RBP30.38■■■□□ 2.45
CRLF1-201ENST00000392386 RGPD4Q7Z3J3 1758 aa30.38■■■□□ 2.45
CRLF1-201ENST00000392386 MCM10Q7L590 875 aa30.38■■■□□ 2.45
CRLF1-201ENST00000392386 PROM2Q8N271 834 aa30.38■■■□□ 2.45
CRLF1-201ENST00000392386 RIPK4P57078 832 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 410.5 ms