RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
TRAV6-201ENST00000390428 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
TRAV6-201ENST00000390428 DSG2Q14126 1118 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 PLPP6Q8IY26 295 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
TRAV6-201ENST00000390428 PRDM11Q9NQV5 511 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 THSD7AQ9UPZ6 1657 aa11.22□□□□□ -0.61
TRAV6-201ENST00000390428 BAG6P46379 1132 aa11.21□□□□□ -0.61
TRAV6-201ENST00000390428 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAV6-201ENST00000390428 LRP5O75197 1615 aa11.2□□□□□ -0.62
TRAV6-201ENST00000390428 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
TRAV6-201ENST00000390428 CDK19Q9BWU1 502 aa11.2□□□□□ -0.62
TRAV6-201ENST00000390428 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
TRAV6-201ENST00000390428 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
TRAV6-201ENST00000390428 TNS1Q9HBL0 1735 aaKnown RBP11.19□□□□□ -0.62
TRAV6-201ENST00000390428 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
TRAV6-201ENST00000390428 PDE4AP27815 886 aa11.18□□□□□ -0.62
TRAV6-201ENST00000390428 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
TRAV6-201ENST00000390428 NBPF8Q3BBV2 869 aa11.18□□□□□ -0.62
TRAV6-201ENST00000390428 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
TRAV6-201ENST00000390428 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
TRAV6-201ENST00000390428 ACEP12821 1306 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 ERBB3P21860 1342 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 NRKQ7Z2Y5 1582 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
TRAV6-201ENST00000390428 EN1Q05925 392 aaPredicted RBP11.17□□□□□ -0.62
TRAV6-201ENST00000390428 NUTM2GQ5VZR2 741 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 DISP2A7MBM2 1401 aa11.17□□□□□ -0.62
TRAV6-201ENST00000390428 PSDA5PKW4 1024 aaPredicted RBP11.16□□□□□ -0.62
TRAV6-201ENST00000390428 NBPF1Q3BBV0 1214 aa11.16□□□□□ -0.62
TRAV6-201ENST00000390428 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
TRAV6-201ENST00000390428 LMO7Q8WWI1 1683 aa11.15□□□□□ -0.62
TRAV6-201ENST00000390428 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
TRAV6-201ENST00000390428 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
TRAV6-201ENST00000390428 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
TRAV6-201ENST00000390428 CAMTA1Q9Y6Y1 1673 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 EVA1CP58658 441 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 FAM196AQ6ZSG2 479 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 CPDO75976 1380 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
TRAV6-201ENST00000390428 USP19O94966 1318 aa11.13□□□□□ -0.63
TRAV6-201ENST00000390428 PPIP5K1Q6PFW1 1433 aa11.13□□□□□ -0.63
TRAV6-201ENST00000390428 NUDT7P0C024 238 aa11.13□□□□□ -0.63
TRAV6-201ENST00000390428 SRPK2P78362 688 aaKnown RBP11.13□□□□□ -0.63
TRAV6-201ENST00000390428 EZH2Q15910 746 aaKnown RBP11.13□□□□□ -0.63
TRAV6-201ENST00000390428 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
TRAV6-201ENST00000390428 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
TRAV6-201ENST00000390428 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
TRAV6-201ENST00000390428 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
TRAV6-201ENST00000390428 TRIM37O94972 964 aa11.12□□□□□ -0.63
TRAV6-201ENST00000390428 NLRP13Q86W25 1043 aa11.12□□□□□ -0.63
TRAV6-201ENST00000390428 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
TRAV6-201ENST00000390428 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
TRAV6-201ENST00000390428 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
TRAV6-201ENST00000390428 GCP02774 474 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 R3HDM1Q15032 1099 aaKnown RBP11.11□□□□□ -0.63
TRAV6-201ENST00000390428 LARP1Q6PKG0 1096 aaKnown RBP11.11□□□□□ -0.63
TRAV6-201ENST00000390428 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 CAMKK2Q96RR4 588 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 PARP4Q9UKK3 1724 aaKnown RBP11.11□□□□□ -0.63
TRAV6-201ENST00000390428 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
TRAV6-201ENST00000390428 RREB1Q92766 1687 aa11.11□□□□□ -0.63
TRAV6-201ENST00000390428 APBA3O96018 575 aa11.1□□□□□ -0.63
TRAV6-201ENST00000390428 MFSD10Q14728 455 aa11.1□□□□□ -0.63
TRAV6-201ENST00000390428 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
TRAV6-201ENST00000390428 COL5A2P05997 1499 aaPredicted RBP11.09□□□□□ -0.63
TRAV6-201ENST00000390428 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
TRAV6-201ENST00000390428 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
TRAV6-201ENST00000390428 DDX27Q96GQ7 796 aaKnown RBP11.09□□□□□ -0.63
TRAV6-201ENST00000390428 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
TRAV6-201ENST00000390428 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
TRAV6-201ENST00000390428 USP6P35125 1406 aa11.09□□□□□ -0.63
TRAV6-201ENST00000390428 COL18A1P39060 1754 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 SLIT3O75094 1523 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 RGPD5Q99666 1765 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
TRAV6-201ENST00000390428 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
TRAV6-201ENST00000390428 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
TRAV6-201ENST00000390428 L3MBTL2Q969R5 705 aa11.07□□□□□ -0.64
TRAV6-201ENST00000390428 LHX6Q9UPM6 363 aa11.07□□□□□ -0.64
TRAV6-201ENST00000390428 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
TRAV6-201ENST00000390428 CRB1P82279 1406 aa11.07□□□□□ -0.64
TRAV6-201ENST00000390428 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
TRAV6-201ENST00000390428 AATKQ6ZMQ8 1374 aa11.06□□□□□ -0.64
TRAV6-201ENST00000390428 WNK3Q9BYP7 1800 aa11.06□□□□□ -0.64
TRAV6-201ENST00000390428 EVC2Q86UK5 1308 aa11.06□□□□□ -0.64
TRAV6-201ENST00000390428 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms