RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 PKD1L3Q7Z443 1732 aa15.47■□□□□ 0.07
TRAV3-201ENST00000390425 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
TRAV3-201ENST00000390425 SGIP1Q9BQI5 828 aa15.47■□□□□ 0.07
TRAV3-201ENST00000390425 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
TRAV3-201ENST00000390425 ITGB4P16144 1822 aa15.46■□□□□ 0.07
TRAV3-201ENST00000390425 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
TRAV3-201ENST00000390425 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
TRAV3-201ENST00000390425 TAF1LQ8IZX4 1826 aa15.45■□□□□ 0.06
TRAV3-201ENST00000390425 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
TRAV3-201ENST00000390425 CARD14Q9BXL6 1004 aa15.45■□□□□ 0.06
TRAV3-201ENST00000390425 USHBP1Q8N6Y0 703 aa15.44■□□□□ 0.06
TRAV3-201ENST00000390425 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
TRAV3-201ENST00000390425 INSRP06213 1382 aa15.44■□□□□ 0.06
TRAV3-201ENST00000390425 CHD4Q14839 1912 aa15.44■□□□□ 0.06
TRAV3-201ENST00000390425 C5P01031 1676 aa15.44■□□□□ 0.06
TRAV3-201ENST00000390425 SMG6Q86US8 1419 aaKnown RBP15.43■□□□□ 0.06
TRAV3-201ENST00000390425 ZCRB1Q8TBF4 217 aaKnown RBP15.43■□□□□ 0.06
TRAV3-201ENST00000390425 FLT4P35916 1363 aa15.43■□□□□ 0.06
TRAV3-201ENST00000390425 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
TRAV3-201ENST00000390425 KIF24Q5T7B8 1368 aa15.42■□□□□ 0.06
TRAV3-201ENST00000390425 PRIM1P49642 420 aaKnown RBP15.42■□□□□ 0.06
TRAV3-201ENST00000390425 HSP90AB2PQ58FF8 381 aa15.42■□□□□ 0.06
TRAV3-201ENST00000390425 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
TRAV3-201ENST00000390425 KCNQ4P56696 695 aa15.41■□□□□ 0.06
TRAV3-201ENST00000390425 CDCA8Q53HL2 280 aa15.41■□□□□ 0.06
TRAV3-201ENST00000390425 FHDC1Q9C0D6 1143 aaPredicted RBP15.41■□□□□ 0.06
TRAV3-201ENST00000390425 YY1P25490 414 aa15.4■□□□□ 0.06
TRAV3-201ENST00000390425 SLC27A3Q5K4L6 730 aa15.4■□□□□ 0.06
TRAV3-201ENST00000390425 SYTL4Q96C24 671 aaPredicted RBP15.4■□□□□ 0.06
TRAV3-201ENST00000390425 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
TRAV3-201ENST00000390425 CGNL1Q0VF96 1302 aa15.4■□□□□ 0.06
TRAV3-201ENST00000390425 PNPLA7Q6ZV29 1317 aa15.4■□□□□ 0.06
TRAV3-201ENST00000390425 SYT17Q9BSW7 474 aa15.39■□□□□ 0.05
TRAV3-201ENST00000390425 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
TRAV3-201ENST00000390425 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
TRAV3-201ENST00000390425 MAP3K5Q99683 1374 aa15.38■□□□□ 0.05
TRAV3-201ENST00000390425 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
TRAV3-201ENST00000390425 GOLGB1Q14789 3259 aaKnown RBP15.36■□□□□ 0.05
TRAV3-201ENST00000390425 UBR3Q6ZT12 1888 aa15.36■□□□□ 0.05
TRAV3-201ENST00000390425 ARXQ96QS3 562 aa15.36■□□□□ 0.05
TRAV3-201ENST00000390425 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
TRAV3-201ENST00000390425 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
TRAV3-201ENST00000390425 CYP27B1O15528 508 aa15.35■□□□□ 0.05
TRAV3-201ENST00000390425 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
TRAV3-201ENST00000390425 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
TRAV3-201ENST00000390425 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
TRAV3-201ENST00000390425 CCNL1Q9UK58 526 aaPredicted RBP15.34■□□□□ 0.05
TRAV3-201ENST00000390425 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
TRAV3-201ENST00000390425 SLC16A10Q8TF71 515 aa15.33■□□□□ 0.04
TRAV3-201ENST00000390425 TFCP2L1Q9NZI6 479 aa15.32■□□□□ 0.04
TRAV3-201ENST00000390425 WASHC2AQ641Q2 1341 aa15.32■□□□□ 0.04
TRAV3-201ENST00000390425 PALLDQ8WX93 1383 aa15.32■□□□□ 0.04
TRAV3-201ENST00000390425 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
TRAV3-201ENST00000390425 PPM1GO15355 546 aaPredicted RBP15.3■□□□□ 0.04
TRAV3-201ENST00000390425 EYA1Q99502 592 aa15.3■□□□□ 0.04
TRAV3-201ENST00000390425 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
TRAV3-201ENST00000390425 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
TRAV3-201ENST00000390425 MPRIPQ6WCQ1 1025 aa15.28■□□□□ 0.04
TRAV3-201ENST00000390425 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
TRAV3-201ENST00000390425 POLD1P28340 1107 aa15.27■□□□□ 0.04
TRAV3-201ENST00000390425 NKX1-1Q15270 411 aaPredicted RBP15.27■□□□□ 0.04
TRAV3-201ENST00000390425 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
TRAV3-201ENST00000390425 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
TRAV3-201ENST00000390425 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
TRAV3-201ENST00000390425 NLGN2Q8NFZ4 835 aa15.26■□□□□ 0.03
TRAV3-201ENST00000390425 PIGBQ92521 554 aa15.26■□□□□ 0.03
TRAV3-201ENST00000390425 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
TRAV3-201ENST00000390425 EIF4G2P78344 907 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRAV3-201ENST00000390425 ZNF784Q8NCA9 323 aaPredicted RBP15.25■□□□□ 0.03
TRAV3-201ENST00000390425 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
TRAV3-201ENST00000390425 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
TRAV3-201ENST00000390425 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
TRAV3-201ENST00000390425 MSL1Q68DK7 614 aa15.24■□□□□ 0.03
TRAV3-201ENST00000390425 PANK3Q9H999 370 aa15.24■□□□□ 0.03
TRAV3-201ENST00000390425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAV3-201ENST00000390425 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
TRAV3-201ENST00000390425 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
TRAV3-201ENST00000390425 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
TRAV3-201ENST00000390425 PHKG2P15735 406 aa15.23■□□□□ 0.03
TRAV3-201ENST00000390425 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
TRAV3-201ENST00000390425 MSH5O43196 834 aa15.22■□□□□ 0.03
TRAV3-201ENST00000390425 SMIM5Q71RC9 77 aa15.22■□□□□ 0.03
TRAV3-201ENST00000390425 KDRP35968 1356 aa15.22■□□□□ 0.03
TRAV3-201ENST00000390425 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
TRAV3-201ENST00000390425 LINC00116Q8NCU8 138 aa15.21■□□□□ 0.03
TRAV3-201ENST00000390425 SCN11AQ9UI33 1791 aa15.21■□□□□ 0.02
TRAV3-201ENST00000390425 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 KDM6AO15550 1401 aaPredicted RBP15.2■□□□□ 0.02
TRAV3-201ENST00000390425 LOC102724428A0A0B4J2F2 783 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 SIK1P57059 783 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 GPR162Q16538 588 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
TRAV3-201ENST00000390425 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAV3-201ENST00000390425 ITPK1Q13572 414 aa15.19■□□□□ 0.02
TRAV3-201ENST00000390425 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
TRAV3-201ENST00000390425 CCER1Q8TC90 406 aaPredicted RBP15.19■□□□□ 0.02
TRAV3-201ENST00000390425 AK7Q96M32 723 aa15.19■□□□□ 0.02
TRAV3-201ENST00000390425 TMOD3Q9NYL9 352 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms