RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 TXNRD1Q16881 649 aa19.43■□□□□ 0.7
UBE3C-202ENST00000389103 ZCRB1Q8TBF4 217 aaKnown RBP19.43■□□□□ 0.7
UBE3C-202ENST00000389103 TNNT2P45379 298 aaPredicted RBP19.42■□□□□ 0.7
UBE3C-202ENST00000389103 POLKQ9UBT6 870 aa19.42■□□□□ 0.7
UBE3C-202ENST00000389103 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
UBE3C-202ENST00000389103 BTAF1O14981 1849 aa19.41■□□□□ 0.7
UBE3C-202ENST00000389103 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
UBE3C-202ENST00000389103 MAP2P11137 1827 aaKnown RBP19.4■□□□□ 0.7
UBE3C-202ENST00000389103 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
UBE3C-202ENST00000389103 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.69
UBE3C-202ENST00000389103 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
UBE3C-202ENST00000389103 NCAPD2Q15021 1401 aa19.37■□□□□ 0.69
UBE3C-202ENST00000389103 NSD2O96028 1365 aa19.37■□□□□ 0.69
UBE3C-202ENST00000389103 PRIM1P49642 420 aaKnown RBP19.36■□□□□ 0.69
UBE3C-202ENST00000389103 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
UBE3C-202ENST00000389103 EYA1Q99502 592 aa19.36■□□□□ 0.69
UBE3C-202ENST00000389103 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
UBE3C-202ENST00000389103 STK32BQ9NY57 414 aa19.34■□□□□ 0.69
UBE3C-202ENST00000389103 CASZ1Q86V15 1759 aa19.34■□□□□ 0.69
UBE3C-202ENST00000389103 PAPPAQ13219 1627 aa19.34■□□□□ 0.69
UBE3C-202ENST00000389103 PCDH11XQ9BZA7 1347 aa19.34■□□□□ 0.69
UBE3C-202ENST00000389103 PCDH11YQ9BZA8 1340 aa19.34■□□□□ 0.69
UBE3C-202ENST00000389103 EIF4A2Q14240 407 aaKnown RBP19.33■□□□□ 0.69
UBE3C-202ENST00000389103 SLC15A2Q16348 729 aa19.33■□□□□ 0.69
UBE3C-202ENST00000389103 LRRC4BQ9NT99 713 aa19.33■□□□□ 0.69
UBE3C-202ENST00000389103 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.69
UBE3C-202ENST00000389103 KAT6BQ8WYB5 2073 aa19.33■□□□□ 0.68
UBE3C-202ENST00000389103 MORC1Q86VD1 984 aa19.33■□□□□ 0.68
UBE3C-202ENST00000389103 PKD1L3Q7Z443 1732 aa19.32■□□□□ 0.68
UBE3C-202ENST00000389103 CYP27B1O15528 508 aa19.32■□□□□ 0.68
UBE3C-202ENST00000389103 SPON1Q9HCB6 807 aa19.31■□□□□ 0.68
UBE3C-202ENST00000389103 AMER1Q5JTC6 1135 aaPredicted RBP19.3■□□□□ 0.68
UBE3C-202ENST00000389103 KCNQ4P56696 695 aa19.29■□□□□ 0.68
UBE3C-202ENST00000389103 ZNF827Q17R98 1081 aa19.29■□□□□ 0.68
UBE3C-202ENST00000389103 ZBTB7AO95365 584 aa19.28■□□□□ 0.68
UBE3C-202ENST00000389103 SLC27A3Q5K4L6 730 aa19.28■□□□□ 0.68
UBE3C-202ENST00000389103 TOGARAM1Q9Y4F4 1720 aa19.27■□□□□ 0.68
UBE3C-202ENST00000389103 SPG7Q9UQ90 795 aa19.27■□□□□ 0.68
UBE3C-202ENST00000389103 IGSF1Q8N6C5 1336 aa19.27■□□□□ 0.68
UBE3C-202ENST00000389103 LY75O60449 1722 aa19.27■□□□□ 0.67
UBE3C-202ENST00000389103 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
UBE3C-202ENST00000389103 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
UBE3C-202ENST00000389103 NKX1-1Q15270 411 aaPredicted RBP19.24■□□□□ 0.67
UBE3C-202ENST00000389103 MPRIPQ6WCQ1 1025 aa19.24■□□□□ 0.67
UBE3C-202ENST00000389103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.673e-7■■■□□ 17.6
UBE3C-202ENST00000389103 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
UBE3C-202ENST00000389103 ATF5Q9Y2D1 282 aaPredicted RBP19.24■□□□□ 0.67
UBE3C-202ENST00000389103 CCNL1Q9UK58 526 aaPredicted RBP19.23■□□□□ 0.67
UBE3C-202ENST00000389103 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
UBE3C-202ENST00000389103 PHKG2P15735 406 aa19.22■□□□□ 0.67
UBE3C-202ENST00000389103 PTGER2P43116 358 aa19.22■□□□□ 0.67
UBE3C-202ENST00000389103 ITGB4P16144 1822 aa19.21■□□□□ 0.67
UBE3C-202ENST00000389103 AEBP1Q8IUX7 1158 aa19.21■□□□□ 0.67
UBE3C-202ENST00000389103 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
UBE3C-202ENST00000389103 IFNL2Q8IZJ0 200 aa19.2■□□□□ 0.66
UBE3C-202ENST00000389103 PIGBQ92521 554 aa19.2■□□□□ 0.66
UBE3C-202ENST00000389103 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
UBE3C-202ENST00000389103 PLEKHG2Q9H7P9 1386 aa19.19■□□□□ 0.66
UBE3C-202ENST00000389103 PNPLA7Q6ZV29 1317 aa19.19■□□□□ 0.66
UBE3C-202ENST00000389103 IL13P35225 146 aa19.19■□□□□ 0.66
UBE3C-202ENST00000389103 MTHFSP49914 203 aa19.18■□□□□ 0.66
UBE3C-202ENST00000389103 TFCP2L1Q9NZI6 479 aa19.18■□□□□ 0.66
UBE3C-202ENST00000389103 TUBGCP6Q96RT7 1819 aa19.18■□□□□ 0.66
UBE3C-202ENST00000389103 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
UBE3C-202ENST00000389103 SGIP1Q9BQI5 828 aa19.18■□□□□ 0.66
UBE3C-202ENST00000389103 QSER1Q2KHR3 1735 aa19.17■□□□□ 0.66
UBE3C-202ENST00000389103 SULT6B1Q6IMI4 303 aa19.16■□□□□ 0.66
UBE3C-202ENST00000389103 C5P01031 1676 aa19.15■□□□□ 0.66
UBE3C-202ENST00000389103 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
UBE3C-202ENST00000389103 TMOD3Q9NYL9 352 aa19.15■□□□□ 0.66
UBE3C-202ENST00000389103 KDRP35968 1356 aa19.15■□□□□ 0.66
UBE3C-202ENST00000389103 NPC1L1Q9UHC9 1359 aa19.15■□□□□ 0.66
UBE3C-202ENST00000389103 SMARCC1Q92922 1105 aaPredicted RBP19.14■□□□□ 0.66
UBE3C-202ENST00000389103 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
UBE3C-202ENST00000389103 AMOTQ4VCS5 1084 aa19.13■□□□□ 0.65
UBE3C-202ENST00000389103 ASAP1Q9ULH1 1129 aa19.13■□□□□ 0.65
UBE3C-202ENST00000389103 KDM6AO15550 1401 aaPredicted RBP19.12■□□□□ 0.65
UBE3C-202ENST00000389103 TAF1LQ8IZX4 1826 aa19.12■□□□□ 0.65
UBE3C-202ENST00000389103 SLC16A10Q8TF71 515 aa19.11■□□□□ 0.65
UBE3C-202ENST00000389103 DCAF5Q96JK2 942 aa19.11■□□□□ 0.65
UBE3C-202ENST00000389103 FHDC1Q9C0D6 1143 aaPredicted RBP19.11■□□□□ 0.65
UBE3C-202ENST00000389103 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
UBE3C-202ENST00000389103 ATG3Q9NT62 314 aa19.11■□□□□ 0.65
UBE3C-202ENST00000389103 LOC102724428A0A0B4J2F2 783 aa19.1■□□□□ 0.65
UBE3C-202ENST00000389103 HSP90AB1P08238 724 aaKnown RBP19.1■□□□□ 0.65
UBE3C-202ENST00000389103 HMOX1P09601 288 aa19.1■□□□□ 0.65
UBE3C-202ENST00000389103 SIK1P57059 783 aa19.1■□□□□ 0.65
UBE3C-202ENST00000389103 ARXQ96QS3 562 aa19.1■□□□□ 0.65
UBE3C-202ENST00000389103 C4BP0C0L5 1744 aa19.1■□□□□ 0.65
UBE3C-202ENST00000389103 ERVV-2B6SEH9 535 aa19.09■□□□□ 0.65
UBE3C-202ENST00000389103 DIAPH1O60610 1272 aaKnown RBP19.09■□□□□ 0.65
UBE3C-202ENST00000389103 COL3A1P02461 1466 aaPredicted RBP19.09■□□□□ 0.65
UBE3C-202ENST00000389103 MSH5O43196 834 aa19.08■□□□□ 0.65
UBE3C-202ENST00000389103 C1orf141Q5JVX7 400 aa19.08■□□□□ 0.65
UBE3C-202ENST00000389103 AMIGO3Q86WK7 504 aa19.08■□□□□ 0.65
UBE3C-202ENST00000389103 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
UBE3C-202ENST00000389103 LINC00116Q8NCU8 138 aa19.07■□□□□ 0.64
UBE3C-202ENST00000389103 SYT17Q9BSW7 474 aa19.07■□□□□ 0.64
UBE3C-202ENST00000389103 ITPK1Q13572 414 aa19.07■□□□□ 0.64
UBE3C-202ENST00000389103 SMIM5Q71RC9 77 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms