RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 SOX11P35716 441 aa7.06□□□□□ -1.28
RNU1-39P-201ENST00000383897 PHTF2Q8N3S3 785 aa7.06□□□□□ -1.28
RNU1-39P-201ENST00000383897 OSBPL3Q9H4L5 887 aa7.06□□□□□ -1.28
RNU1-39P-201ENST00000383897 MYCP01106 439 aaPredicted RBP7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 CYP2U1Q7Z449 544 aa7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 CCDC125Q86Z20 511 aa7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 PLPP7Q8NBV4 271 aa7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 ADAMTS19Q8TE59 1207 aa7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 TRIM52Q96A61 297 aa7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 ARHGEF10LQ9HCE6 1279 aa7.05□□□□□ -1.28
RNU1-39P-201ENST00000383897 TERTO14746 1132 aaKnown RBP7.04□□□□□ -1.28
RNU1-39P-201ENST00000383897 STAU1O95793 577 aaKnown RBP7.04□□□□□ -1.28
RNU1-39P-201ENST00000383897 FOXD4L5Q5VV16 416 aaPredicted RBP7.04□□□□□ -1.28
RNU1-39P-201ENST00000383897 ALG2Q9H553 416 aa7.04□□□□□ -1.28
RNU1-39P-201ENST00000383897 A0A1W2PRU2 124 aa7.03□□□□□ -1.28
RNU1-39P-201ENST00000383897 SKIP12755 728 aa7.03□□□□□ -1.28
RNU1-39P-201ENST00000383897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.28
RNU1-39P-201ENST00000383897 HDGFL1Q5TGJ6 251 aa7.03□□□□□ -1.28
RNU1-39P-201ENST00000383897 RNF217Q8TC41 542 aa7.03□□□□□ -1.28
RNU1-39P-201ENST00000383897 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
RNU1-39P-201ENST00000383897 TRAK2O60296 914 aa7.02□□□□□ -1.29
RNU1-39P-201ENST00000383897 WFS1O76024 890 aa7.02□□□□□ -1.29
RNU1-39P-201ENST00000383897 NFX1Q12986 1120 aaKnown RBP7.02□□□□□ -1.29
RNU1-39P-201ENST00000383897 FNBP4Q8N3X1 1017 aaPredicted RBP7.02□□□□□ -1.29
RNU1-39P-201ENST00000383897 USP4Q13107 963 aa7.01□□□□□ -1.29
RNU1-39P-201ENST00000383897 TREML4Q6UXN2 200 aa7.01□□□□□ -1.29
RNU1-39P-201ENST00000383897 PRICKLE2Q7Z3G6 844 aa7.01□□□□□ -1.29
RNU1-39P-201ENST00000383897 DEPDC4Q8N2C3 294 aa7.01□□□□□ -1.29
RNU1-39P-201ENST00000383897 GLMNQ92990 594 aa7.01□□□□□ -1.29
RNU1-39P-201ENST00000383897 NLRP3Q96P20 1036 aa7.01□□□□□ -1.29
RNU1-39P-201ENST00000383897 RHOQP17081 205 aa7□□□□□ -1.29
RNU1-39P-201ENST00000383897 PTSQ03393 145 aa7□□□□□ -1.29
RNU1-39P-201ENST00000383897 LCE2CQ5TA81 110 aa7□□□□□ -1.29
RNU1-39P-201ENST00000383897 UCN2Q96RP3 112 aa7□□□□□ -1.29
RNU1-39P-201ENST00000383897 CHIC2Q9UKJ5 165 aa7□□□□□ -1.29
RNU1-39P-201ENST00000383897 A6NJR5 290 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 GNRH1P01148 92 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 IL2RAP01589 272 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 CLN3Q13286 438 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 NCOA4Q13772 614 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 MAP7D1Q3KQU3 841 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 SLC27A3Q5K4L6 730 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 TBC1D9Q6ZT07 1266 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 SLC16A10Q8TF71 515 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 GTF3C3Q9Y5Q9 886 aa6.99□□□□□ -1.29
RNU1-39P-201ENST00000383897 USP17L5A8MUK1 530 aa6.98□□□□□ -1.29
RNU1-39P-201ENST00000383897 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
RNU1-39P-201ENST00000383897 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
RNU1-39P-201ENST00000383897 EML3Q32P44 896 aa6.98□□□□□ -1.29
RNU1-39P-201ENST00000383897 CNKSR1Q969H4 720 aa6.98□□□□□ -1.29
RNU1-39P-201ENST00000383897 SIRT1Q96EB6 747 aa6.98□□□□□ -1.29
RNU1-39P-201ENST00000383897 H3BM21 787 aa6.97□□□□□ -1.29
RNU1-39P-201ENST00000383897 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
RNU1-39P-201ENST00000383897 CCDC155Q8N6L0 562 aa6.97□□□□□ -1.29
RNU1-39P-201ENST00000383897 CALR3Q96L12 384 aaKnown RBP6.97□□□□□ -1.29
RNU1-39P-201ENST00000383897 ETNK1Q9HBU6 452 aa6.97□□□□□ -1.29
RNU1-39P-201ENST00000383897 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
RNU1-39P-201ENST00000383897 GDF10P55107 478 aa6.96□□□□□ -1.3
RNU1-39P-201ENST00000383897 PSME1Q06323 249 aa6.96□□□□□ -1.3
RNU1-39P-201ENST00000383897 POU4F2Q12837 409 aa6.96□□□□□ -1.3
RNU1-39P-201ENST00000383897 ESYT1Q9BSJ8 1104 aa6.96□□□□□ -1.3
RNU1-39P-201ENST00000383897 ZNF777Q9ULD5 760 aaPredicted RBP6.96□□□□□ -1.3
RNU1-39P-201ENST00000383897 SENP3-EIF4A1A0A087X0R7 540 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 USP17L3A6NCW0 530 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 USP17L4A6NCW7 530 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 GPC1P35052 558 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 SCNN1DP51172 638 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 GTF2IP78347 998 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 CENPCQ03188 943 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 ESCO1Q5FWF5 840 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 USP17L2Q6R6M4 530 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 USP17L1Q7RTZ2 530 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 NFATC2IPQ8NCF5 419 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 IRF7Q92985 503 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 NOD1Q9Y239 953 aa6.95□□□□□ -1.3
RNU1-39P-201ENST00000383897 CDC14CA4D256 554 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 ATP9BO43861 1147 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 GMPRP36959 345 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 PHKA2P46019 1235 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 TLR1Q15399 786 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 SERTAD1Q9UHV2 236 aa6.94□□□□□ -1.3
RNU1-39P-201ENST00000383897 TMEM214Q6NUQ4 689 aaKnown RBP6.93□□□□□ -1.3
RNU1-39P-201ENST00000383897 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
RNU1-39P-201ENST00000383897 ZSCAN10Q96SZ4 725 aaPredicted RBP6.93□□□□□ -1.3
RNU1-39P-201ENST00000383897 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
RNU1-39P-201ENST00000383897 TFIP11Q9UBB9 837 aaKnown RBP6.93□□□□□ -1.3
RNU1-39P-201ENST00000383897 PCDHGA11Q9Y5H2 935 aa6.93□□□□□ -1.3
RNU1-39P-201ENST00000383897 WASLO00401 505 aaPredicted RBP6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 INHAP05111 366 aa6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 ITGA6P23229 1130 aa6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 NBPF10Q6P3W6 841 aaKnown RBP6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 GAS2L1Q99501 681 aaPredicted RBP6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 HRH3Q9Y5N1 445 aa6.92□□□□□ -1.3
RNU1-39P-201ENST00000383897 PALM3A6NDB9 673 aaPredicted RBP6.91□□□□□ -1.3
RNU1-39P-201ENST00000383897 TMEM229AB2RXF0 380 aa6.91□□□□□ -1.3
RNU1-39P-201ENST00000383897 GTF2E1P29083 439 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms