RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CGNL1Q0VF96 1302 aa36.74■■■■□ 3.47
NPHP3-202ENST00000383282 ZNF827Q17R98 1081 aa36.73■■■■□ 3.47
NPHP3-202ENST00000383282 MYOM1P52179 1685 aa36.72■■■■□ 3.47
NPHP3-202ENST00000383282 FLT4P35916 1363 aa36.71■■■■□ 3.47
NPHP3-202ENST00000383282 KIF24Q5T7B8 1368 aa36.71■■■■□ 3.47
NPHP3-202ENST00000383282 USHBP1Q8N6Y0 703 aa36.71■■■■□ 3.47
NPHP3-202ENST00000383282 INSRP06213 1382 aa36.7■■■■□ 3.47
NPHP3-202ENST00000383282 CLSPNQ9HAW4 1339 aa36.7■■■■□ 3.47
NPHP3-202ENST00000383282 RGPD2P0DJD1 1756 aa36.7■■■■□ 3.47
NPHP3-202ENST00000383282 TATP17735 454 aaPredicted RBP36.68■■■■□ 3.46
NPHP3-202ENST00000383282 HSP90AB2PQ58FF8 381 aa36.68■■■■□ 3.46
NPHP3-202ENST00000383282 SGIP1Q9BQI5 828 aa36.68■■■■□ 3.46
NPHP3-202ENST00000383282 KIF20BQ96Q89 1820 aa36.68■■■■□ 3.46
NPHP3-202ENST00000383282 NSD3Q9BZ95 1437 aa36.68■■■■□ 3.46
NPHP3-202ENST00000383282 AKT1S1Q96B36 256 aa36.67■■■■□ 3.46
NPHP3-202ENST00000383282 FHDC1Q9C0D6 1143 aaPredicted RBP36.67■■■■□ 3.46
NPHP3-202ENST00000383282 DOT1LQ8TEK3 1739 aa36.65■■■■□ 3.46
NPHP3-202ENST00000383282 SYT17Q9BSW7 474 aa36.65■■■■□ 3.46
NPHP3-202ENST00000383282 CARD14Q9BXL6 1004 aa36.65■■■■□ 3.46
NPHP3-202ENST00000383282 PCGF6Q9BYE7 350 aa36.65■■■■□ 3.46
NPHP3-202ENST00000383282 ARXQ96QS3 562 aa36.64■■■■□ 3.46
NPHP3-202ENST00000383282 NSD2O96028 1365 aa36.63■■■■□ 3.45
NPHP3-202ENST00000383282 SHANK3Q9BYB0 1731 aa36.62■■■■□ 3.45
NPHP3-202ENST00000383282 SLC16A10Q8TF71 515 aa36.62■■■■□ 3.45
NPHP3-202ENST00000383282 TFCP2L1Q9NZI6 479 aa36.62■■■■□ 3.45
NPHP3-202ENST00000383282 PCDH11XQ9BZA7 1347 aa36.6■■■■□ 3.45
NPHP3-202ENST00000383282 PCDH11YQ9BZA8 1340 aa36.6■■■■□ 3.45
NPHP3-202ENST00000383282 CCNL1Q9UK58 526 aaPredicted RBP36.59■■■■□ 3.45
NPHP3-202ENST00000383282 EMILIN1Q9Y6C2 1016 aa36.59■■■■□ 3.45
NPHP3-202ENST00000383282 KCNQ4P56696 695 aa36.58■■■■□ 3.45
NPHP3-202ENST00000383282 PPM1GO15355 546 aaPredicted RBP36.56■■■■□ 3.44
NPHP3-202ENST00000383282 PNPLA7Q6ZV29 1317 aa36.56■■■■□ 3.44
NPHP3-202ENST00000383282 POLD1P28340 1107 aa36.55■■■■□ 3.44
NPHP3-202ENST00000383282 POLR3GLQ9BT43 218 aa36.53■■■■□ 3.44
NPHP3-202ENST00000383282 LY75O60449 1722 aa36.53■■■■□ 3.44
NPHP3-202ENST00000383282 MAP3K5Q99683 1374 aa36.53■■■■□ 3.44
NPHP3-202ENST00000383282 QSER1Q2KHR3 1735 aa36.52■■■■□ 3.44
NPHP3-202ENST00000383282 HMGB2P26583 209 aaKnown RBP36.51■■■■□ 3.44
NPHP3-202ENST00000383282 WASHC2AQ641Q2 1341 aa36.48■■■■□ 3.43
NPHP3-202ENST00000383282 CYP27B1O15528 508 aa36.46■■■■□ 3.43
NPHP3-202ENST00000383282 MPRIPQ6WCQ1 1025 aa36.45■■■■□ 3.43
NPHP3-202ENST00000383282 KLHL34Q8N239 644 aa36.45■■■■□ 3.43
NPHP3-202ENST00000383282 MSH5O43196 834 aa36.44■■■■□ 3.42
NPHP3-202ENST00000383282 EIF4G2P78344 907 aaKnown RBP eCLIP36.44■■■■□ 3.42
NPHP3-202ENST00000383282 SPG7Q9UQ90 795 aa36.43■■■■□ 3.42
NPHP3-202ENST00000383282 NCAPD2Q15021 1401 aa36.42■■■■□ 3.42
NPHP3-202ENST00000383282 PALLDQ8WX93 1383 aa36.42■■■■□ 3.42
NPHP3-202ENST00000383282 SMARCC1Q92922 1105 aaPredicted RBP36.4■■■■□ 3.42
NPHP3-202ENST00000383282 EYA1Q99502 592 aa36.4■■■■□ 3.42
NPHP3-202ENST00000383282 POLKQ9UBT6 870 aa36.4■■■■□ 3.42
NPHP3-202ENST00000383282 TUBGCP6Q96RT7 1819 aa36.4■■■■□ 3.42
NPHP3-202ENST00000383282 ANKRD26Q9UPS8 1709 aa36.39■■■■□ 3.42
NPHP3-202ENST00000383282 UTRNP46939 3433 aa36.37■■■■□ 3.41
NPHP3-202ENST00000383282 GPR162Q16538 588 aa36.37■■■■□ 3.41
NPHP3-202ENST00000383282 COL23A1Q86Y22 540 aaPredicted RBP36.37■■■■□ 3.41
NPHP3-202ENST00000383282 PKD1L3Q7Z443 1732 aa36.37■■■■□ 3.41
NPHP3-202ENST00000383282 HSPA5P11021 654 aaKnown RBP36.36■■■■□ 3.41
NPHP3-202ENST00000383282 NKX1-1Q15270 411 aaPredicted RBP36.36■■■■□ 3.41
NPHP3-202ENST00000383282 TNNT2P45379 298 aaPredicted RBP36.35■■■■□ 3.41
NPHP3-202ENST00000383282 FLAD1Q8NFF5 587 aa36.35■■■■□ 3.41
NPHP3-202ENST00000383282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.35■■■■□ 3.41
NPHP3-202ENST00000383282 COL24A1Q17RW2 1714 aa36.34■■■■□ 3.41
NPHP3-202ENST00000383282 MAP2P11137 1827 aaKnown RBP36.34■■■■□ 3.41
NPHP3-202ENST00000383282 CCER1Q8TC90 406 aaPredicted RBP36.33■■■■□ 3.41
NPHP3-202ENST00000383282 PIGBQ92521 554 aa36.31■■■■□ 3.4
NPHP3-202ENST00000383282 C5P01031 1676 aa36.31■■■■□ 3.4
NPHP3-202ENST00000383282 EIF4A2Q14240 407 aaKnown RBP36.3■■■■□ 3.4
NPHP3-202ENST00000383282 PANK3Q9H999 370 aa36.3■■■■□ 3.4
NPHP3-202ENST00000383282 TOGARAM1Q9Y4F4 1720 aa36.3■■■■□ 3.4
NPHP3-202ENST00000383282 IFNL2Q8IZJ0 200 aa36.29■■■■□ 3.4
NPHP3-202ENST00000383282 ZNF784Q8NCA9 323 aaPredicted RBP36.29■■■■□ 3.4
NPHP3-202ENST00000383282 AK7Q96M32 723 aa36.29■■■■□ 3.4
NPHP3-202ENST00000383282 PELP1Q8IZL8 1130 aaKnown RBP36.28■■■■□ 3.4
NPHP3-202ENST00000383282 TMOD3Q9NYL9 352 aa36.27■■■■□ 3.4
NPHP3-202ENST00000383282 MSL1Q68DK7 614 aa36.26■■■■□ 3.4
NPHP3-202ENST00000383282 ITGB4P16144 1822 aa36.25■■■■□ 3.39
NPHP3-202ENST00000383282 PHKG2P15735 406 aa36.25■■■■□ 3.39
NPHP3-202ENST00000383282 NLGN2Q8NFZ4 835 aa36.24■■■■□ 3.39
NPHP3-202ENST00000383282 PLEKHG2Q9H7P9 1386 aa36.24■■■■□ 3.39
NPHP3-202ENST00000383282 CHD4Q14839 1912 aa36.22■■■■□ 3.39
NPHP3-202ENST00000383282 LOC102724428A0A0B4J2F2 783 aa36.21■■■■□ 3.39
NPHP3-202ENST00000383282 SIK1P57059 783 aa36.21■■■■□ 3.39
NPHP3-202ENST00000383282 TAF1LQ8IZX4 1826 aa36.21■■■■□ 3.39
NPHP3-202ENST00000383282 C4BP0C0L5 1744 aa36.2■■■■□ 3.39
NPHP3-202ENST00000383282 IGSF1Q8N6C5 1336 aa36.2■■■■□ 3.39
NPHP3-202ENST00000383282 PHF14O94880 888 aa36.17■■■■□ 3.38
NPHP3-202ENST00000383282 MORC1Q86VD1 984 aa36.17■■■■□ 3.38
NPHP3-202ENST00000383282 ASAP1Q9ULH1 1129 aa36.16■■■■□ 3.38
NPHP3-202ENST00000383282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.14■■■■□ 3.38
NPHP3-202ENST00000383282 HSP90AB1P08238 724 aaKnown RBP36.14■■■■□ 3.38
NPHP3-202ENST00000383282 SSFA2P28290 1259 aa36.14■■■■□ 3.38
NPHP3-202ENST00000383282 GRIN3BO60391 1043 aa36.13■■■■□ 3.37
NPHP3-202ENST00000383282 ATP6V1AP38606 617 aa36.13■■■■□ 3.37
NPHP3-202ENST00000383282 PLEKHO1Q53GL0 409 aaPredicted RBP36.13■■■■□ 3.37
NPHP3-202ENST00000383282 LINC00116Q8NCU8 138 aa36.13■■■■□ 3.37
NPHP3-202ENST00000383282 KNSTRNQ9Y448 316 aa36.13■■■■□ 3.37
NPHP3-202ENST00000383282 CD2APQ9Y5K6 639 aa36.13■■■■□ 3.37
NPHP3-202ENST00000383282 AMIGO3Q86WK7 504 aa36.11■■■■□ 3.37
NPHP3-202ENST00000383282 ATG3Q9NT62 314 aa36.1■■■■□ 3.37
NPHP3-202ENST00000383282 ERVV-2B6SEH9 535 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms