RNA–Protein interactions for RNA: ENST00000382275.5

CDH18-202, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-202ENST00000382275 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
CDH18-202ENST00000382275 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
CDH18-202ENST00000382275 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
CDH18-202ENST00000382275 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
CDH18-202ENST00000382275 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.29
CDH18-202ENST00000382275 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
CDH18-202ENST00000382275 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
CDH18-202ENST00000382275 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.29
CDH18-202ENST00000382275 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.29
CDH18-202ENST00000382275 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
CDH18-202ENST00000382275 ZBTB7CA1YPR0 619 aa13.21□□□□□ -0.3
CDH18-202ENST00000382275 RAPGEF4Q8WZA2 1011 aa13.21□□□□□ -0.3
CDH18-202ENST00000382275 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
CDH18-202ENST00000382275 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
CDH18-202ENST00000382275 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
CDH18-202ENST00000382275 GAS2L2Q8NHY3 880 aa13.19□□□□□ -0.3
CDH18-202ENST00000382275 PAPPAQ13219 1627 aa13.19□□□□□ -0.3
CDH18-202ENST00000382275 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
CDH18-202ENST00000382275 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
CDH18-202ENST00000382275 ZCRB1Q8TBF4 217 aaKnown RBP13.19□□□□□ -0.3
CDH18-202ENST00000382275 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
CDH18-202ENST00000382275 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
CDH18-202ENST00000382275 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
CDH18-202ENST00000382275 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
CDH18-202ENST00000382275 WDR43Q15061 677 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDH18-202ENST00000382275 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
CDH18-202ENST00000382275 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
CDH18-202ENST00000382275 SEPT12Q8IYM1 358 aa13.18□□□□□ -0.3
CDH18-202ENST00000382275 EXOC5O00471 708 aa13.17□□□□□ -0.3
CDH18-202ENST00000382275 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
CDH18-202ENST00000382275 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDH18-202ENST00000382275 CCDC27Q2M243 656 aa13.17□□□□□ -0.3
CDH18-202ENST00000382275 DDB1Q16531 1140 aa13.17□□□□□ -0.3
CDH18-202ENST00000382275 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
CDH18-202ENST00000382275 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
CDH18-202ENST00000382275 MIER1Q8N108 512 aa13.17□□□□□ -0.3
CDH18-202ENST00000382275 FAM98CQ17RN3 349 aaKnown RBP13.16□□□□□ -0.3
CDH18-202ENST00000382275 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
CDH18-202ENST00000382275 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
CDH18-202ENST00000382275 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
CDH18-202ENST00000382275 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
CDH18-202ENST00000382275 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
CDH18-202ENST00000382275 PHKG2P15735 406 aa13.15□□□□□ -0.3
CDH18-202ENST00000382275 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
CDH18-202ENST00000382275 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
CDH18-202ENST00000382275 ITGB4P16144 1822 aa13.15□□□□□ -0.3
CDH18-202ENST00000382275 MAP3K5Q99683 1374 aa13.15□□□□□ -0.31
CDH18-202ENST00000382275 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
CDH18-202ENST00000382275 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
CDH18-202ENST00000382275 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
CDH18-202ENST00000382275 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
CDH18-202ENST00000382275 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
CDH18-202ENST00000382275 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
CDH18-202ENST00000382275 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
CDH18-202ENST00000382275 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
CDH18-202ENST00000382275 CYP27B1O15528 508 aa13.13□□□□□ -0.31
CDH18-202ENST00000382275 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
CDH18-202ENST00000382275 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
CDH18-202ENST00000382275 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
CDH18-202ENST00000382275 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
CDH18-202ENST00000382275 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
CDH18-202ENST00000382275 NEFMP07197 916 aa13.12□□□□□ -0.31
CDH18-202ENST00000382275 HMOX1P09601 288 aa13.12□□□□□ -0.31
CDH18-202ENST00000382275 LY75O60449 1722 aa13.12□□□□□ -0.31
CDH18-202ENST00000382275 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
CDH18-202ENST00000382275 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
CDH18-202ENST00000382275 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
CDH18-202ENST00000382275 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
CDH18-202ENST00000382275 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
CDH18-202ENST00000382275 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
CDH18-202ENST00000382275 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
CDH18-202ENST00000382275 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
CDH18-202ENST00000382275 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
CDH18-202ENST00000382275 IL16Q14005 1332 aa13.09□□□□□ -0.31
CDH18-202ENST00000382275 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
CDH18-202ENST00000382275 BTAF1O14981 1849 aa13.09□□□□□ -0.31
CDH18-202ENST00000382275 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
CDH18-202ENST00000382275 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
CDH18-202ENST00000382275 ZNF521Q96K83 1311 aa13.08□□□□□ -0.32
CDH18-202ENST00000382275 RREB1Q92766 1687 aa13.08□□□□□ -0.32
CDH18-202ENST00000382275 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
CDH18-202ENST00000382275 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
CDH18-202ENST00000382275 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
CDH18-202ENST00000382275 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
CDH18-202ENST00000382275 C5P01031 1676 aa13.06□□□□□ -0.32
CDH18-202ENST00000382275 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
CDH18-202ENST00000382275 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
CDH18-202ENST00000382275 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
CDH18-202ENST00000382275 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
CDH18-202ENST00000382275 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
CDH18-202ENST00000382275 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
CDH18-202ENST00000382275 PLSCR1O15162 318 aa13.04□□□□□ -0.32
CDH18-202ENST00000382275 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
CDH18-202ENST00000382275 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
CDH18-202ENST00000382275 RIPK4P57078 832 aa13.03□□□□□ -0.32
CDH18-202ENST00000382275 LAMB4A4D0S4 1761 aa13.03□□□□□ -0.32
CDH18-202ENST00000382275 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
CDH18-202ENST00000382275 APAF1O14727 1248 aa13.02□□□□□ -0.32
CDH18-202ENST00000382275 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.32
CDH18-202ENST00000382275 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms