RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
VLDLR-203ENST00000382100 PDE4DIPQ5VU43 2346 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 PAFAH1B1P43034 410 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.53□□□□□ -0.56
VLDLR-203ENST00000382100 FSD2A1L4K1 749 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 CCDC158Q5M9N0 1113 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 TTC5Q8N0Z6 440 aa11.53□□□□□ -0.56
VLDLR-203ENST00000382100 RSRC1Q96IZ7 334 aaKnown RBP11.53□□□□□ -0.56
VLDLR-203ENST00000382100 LUC7L2Q9Y383 392 aaKnown RBP11.53□□□□□ -0.56
VLDLR-203ENST00000382100 FYCO1Q9BQS8 1478 aa11.52□□□□□ -0.56
VLDLR-203ENST00000382100 IRX4P78413 519 aa11.52□□□□□ -0.56
VLDLR-203ENST00000382100 BMS1Q14692 1282 aaKnown RBP11.52□□□□□ -0.56
VLDLR-203ENST00000382100 NBPF1Q3BBV0 1214 aa11.52□□□□□ -0.56
VLDLR-203ENST00000382100 ATP2A1O14983 1001 aa11.52□□□□□ -0.57
VLDLR-203ENST00000382100 SPA17Q15506 151 aa11.52□□□□□ -0.57
VLDLR-203ENST00000382100 DDX23Q9BUQ8 820 aaKnown RBP11.52□□□□□ -0.57
VLDLR-203ENST00000382100 TERF1P54274 439 aa11.52□□□□□ -0.57
VLDLR-203ENST00000382100 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
VLDLR-203ENST00000382100 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
VLDLR-203ENST00000382100 PODNQ7Z5L7 613 aa11.52□□□□□ -0.57
VLDLR-203ENST00000382100 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 MYH10P35580 1976 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
VLDLR-203ENST00000382100 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 B4GALNT4Q76KP1 1039 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
VLDLR-203ENST00000382100 CLGNO14967 610 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 TEFQ10587 303 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 CLUAP1Q96AJ1 413 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 VCXQ9H320 206 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
VLDLR-203ENST00000382100 MYOM3Q5VTT5 1437 aa11.51□□□□□ -0.57
VLDLR-203ENST00000382100 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 KRT222Q8N1A0 295 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 SPAG1Q07617 926 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 MAP3K21Q5TCX8 1036 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.57
VLDLR-203ENST00000382100 TRAK2O60296 914 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 CCDC150Q8NCX0 1101 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
VLDLR-203ENST00000382100 HFM1A2PYH4 1435 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 DNAJC8O75937 253 aaPredicted RBP11.5□□□□□ -0.57
VLDLR-203ENST00000382100 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 IQCDQ96DY2 449 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 POLE3Q9NRF9 147 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 ZFYVE27Q5T4F4 411 aa11.5□□□□□ -0.57
VLDLR-203ENST00000382100 USP47Q96K76 1375 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 RGL3Q3MIN7 710 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 CFAP157Q5JU67 520 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 VPS37CA5D8V6 355 aaPredicted RBP11.49□□□□□ -0.57
VLDLR-203ENST00000382100 STK38Q15208 465 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 RAB3GAP2Q9H2M9 1393 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 SMC6Q96SB8 1091 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 VCX3AQ9NNX9 186 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 ARHGAP24Q8N264 748 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 VCX3BQ9H321 246 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 IKBKGQ9Y6K9 419 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 FOXD1Q16676 465 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 TSNARE1Q96NA8 513 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 RASAL2Q9UJF2 1139 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 ATP5DP30049 168 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 PTPN14Q15678 1187 aa11.49□□□□□ -0.57
VLDLR-203ENST00000382100 TNMDQ9H2S6 317 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 ANAPC4Q9UJX5 808 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 RAD50Q92878 1312 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 GOLGA1Q92805 767 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 ARID3AQ99856 593 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 TCHPQ9BT92 498 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 FKBP15Q5T1M5 1219 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 CTAGE1Q96RT6 745 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 CEP135Q66GS9 1140 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 SERPINC1P01008 464 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 ERCC6LQ2NKX8 1250 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 ANKRD62A6NC57 917 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 MYO1BO43795 1136 aa11.48□□□□□ -0.57
VLDLR-203ENST00000382100 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
VLDLR-203ENST00000382100 ACTN2P35609 894 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 CCDC174Q6PII3 467 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 RPGRIP1LQ68CZ1 1315 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 PAF1Q8N7H5 531 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 RAB3IPQ96QF0 476 aaPredicted RBP11.47□□□□□ -0.57
VLDLR-203ENST00000382100 FSD1Q9BTV5 496 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 ANAPC15P60006 121 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 ANKRD45Q5TZF3 282 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 ARFGAP3Q9NP61 516 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 PPP2R5EQ16537 467 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms