RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 DDB1Q16531 1140 aa20.63■□□□□ 0.89
PDGFB-202ENST00000381551 RSPH6AQ9H0K4 717 aa20.63■□□□□ 0.89
PDGFB-202ENST00000381551 ADAMTS8Q9UP79 889 aa20.63■□□□□ 0.89
PDGFB-202ENST00000381551 THSD7AQ9UPZ6 1657 aa20.62■□□□□ 0.89
PDGFB-202ENST00000381551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
PDGFB-202ENST00000381551 RGS12O14924 1447 aa20.61■□□□□ 0.89
PDGFB-202ENST00000381551 WDR43Q15061 677 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDGFB-202ENST00000381551 ZCRB1Q8TBF4 217 aaKnown RBP20.61■□□□□ 0.89
PDGFB-202ENST00000381551 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
PDGFB-202ENST00000381551 PRKAR2BP31323 418 aa20.59■□□□□ 0.89
PDGFB-202ENST00000381551 PDE3BQ13370 1112 aa20.59■□□□□ 0.89
PDGFB-202ENST00000381551 PLEKHO1Q53GL0 409 aaPredicted RBP20.59■□□□□ 0.89
PDGFB-202ENST00000381551 WNK3Q9BYP7 1800 aa20.59■□□□□ 0.89
PDGFB-202ENST00000381551 PLEKHG2Q9H7P9 1386 aa20.59■□□□□ 0.89
PDGFB-202ENST00000381551 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.89
PDGFB-202ENST00000381551 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.89
PDGFB-202ENST00000381551 KRT27Q7Z3Y8 459 aa20.58■□□□□ 0.89
PDGFB-202ENST00000381551 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
PDGFB-202ENST00000381551 PLEKHF1Q96S99 279 aa20.58■□□□□ 0.89
PDGFB-202ENST00000381551 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
PDGFB-202ENST00000381551 SPG7Q9UQ90 795 aa20.58■□□□□ 0.89
PDGFB-202ENST00000381551 MARCH10Q8NA82 808 aaPredicted RBP20.56■□□□□ 0.88
PDGFB-202ENST00000381551 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
PDGFB-202ENST00000381551 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
PDGFB-202ENST00000381551 TNS2Q63HR2 1409 aa20.54■□□□□ 0.88
PDGFB-202ENST00000381551 LRRC37A3O60309 1634 aa20.54■□□□□ 0.88
PDGFB-202ENST00000381551 CYP27B1O15528 508 aa20.54■□□□□ 0.88
PDGFB-202ENST00000381551 BRWD3Q6RI45 1802 aa20.54■□□□□ 0.88
PDGFB-202ENST00000381551 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
PDGFB-202ENST00000381551 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
PDGFB-202ENST00000381551 FAM182BQ5T319 152 aa20.52■□□□□ 0.88
PDGFB-202ENST00000381551 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
PDGFB-202ENST00000381551 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
PDGFB-202ENST00000381551 PKD1L3Q7Z443 1732 aa20.51■□□□□ 0.87
PDGFB-202ENST00000381551 NEFMP07197 916 aa20.51■□□□□ 0.87
PDGFB-202ENST00000381551 PHKG2P15735 406 aa20.51■□□□□ 0.87
PDGFB-202ENST00000381551 ZNF530Q6P9A1 599 aaPredicted RBP20.51■□□□□ 0.87
PDGFB-202ENST00000381551 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
PDGFB-202ENST00000381551 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
PDGFB-202ENST00000381551 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
PDGFB-202ENST00000381551 GAS2L2Q8NHY3 880 aa20.5■□□□□ 0.87
PDGFB-202ENST00000381551 SHANK3Q9BYB0 1731 aa20.49■□□□□ 0.87
PDGFB-202ENST00000381551 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
PDGFB-202ENST00000381551 FAM196AQ6ZSG2 479 aa20.48■□□□□ 0.87
PDGFB-202ENST00000381551 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
PDGFB-202ENST00000381551 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
PDGFB-202ENST00000381551 BCL9O00512 1426 aa20.46■□□□□ 0.87
PDGFB-202ENST00000381551 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
PDGFB-202ENST00000381551 HSP90AB1P08238 724 aaKnown RBP20.45■□□□□ 0.86
PDGFB-202ENST00000381551 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
PDGFB-202ENST00000381551 APAF1O14727 1248 aa20.44■□□□□ 0.86
PDGFB-202ENST00000381551 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
PDGFB-202ENST00000381551 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
PDGFB-202ENST00000381551 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
PDGFB-202ENST00000381551 LGR6Q9HBX8 967 aa20.43■□□□□ 0.86
PDGFB-202ENST00000381551 RIPK4P57078 832 aa20.42■□□□□ 0.86
PDGFB-202ENST00000381551 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
PDGFB-202ENST00000381551 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
PDGFB-202ENST00000381551 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
PDGFB-202ENST00000381551 MAP3K5Q99683 1374 aa20.41■□□□□ 0.86
PDGFB-202ENST00000381551 ERVV-2B6SEH9 535 aa20.4■□□□□ 0.86
PDGFB-202ENST00000381551 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
PDGFB-202ENST00000381551 KCNQ2O43526 872 aa20.4■□□□□ 0.86
PDGFB-202ENST00000381551 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
PDGFB-202ENST00000381551 NEUROD2Q15784 382 aa20.4■□□□□ 0.86
PDGFB-202ENST00000381551 ACSBG1Q96GR2 724 aa20.4■□□□□ 0.86
PDGFB-202ENST00000381551 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
PDGFB-202ENST00000381551 EP400Q96L91 3159 aa20.38■□□□□ 0.85
PDGFB-202ENST00000381551 TRIM37O94972 964 aa20.38■□□□□ 0.85
PDGFB-202ENST00000381551 PTF1AQ7RTS3 328 aa20.38■□□□□ 0.85
PDGFB-202ENST00000381551 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
PDGFB-202ENST00000381551 BCL11BQ9C0K0 894 aaPredicted RBP20.38■□□□□ 0.85
PDGFB-202ENST00000381551 DCTN1Q14203 1278 aa20.37■□□□□ 0.85
PDGFB-202ENST00000381551 MCM10Q7L590 875 aa20.37■□□□□ 0.85
PDGFB-202ENST00000381551 TRIM35Q9UPQ4 493 aa20.37■□□□□ 0.85
PDGFB-202ENST00000381551 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
PDGFB-202ENST00000381551 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
PDGFB-202ENST00000381551 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
PDGFB-202ENST00000381551 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
PDGFB-202ENST00000381551 SBF2Q86WG5 1849 aa20.35■□□□□ 0.85
PDGFB-202ENST00000381551 CABP4P57796 275 aa20.35■□□□□ 0.85
PDGFB-202ENST00000381551 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
PDGFB-202ENST00000381551 DLG5Q8TDM6 1919 aa20.35■□□□□ 0.85
PDGFB-202ENST00000381551 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
PDGFB-202ENST00000381551 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
PDGFB-202ENST00000381551 PIGBQ92521 554 aa20.34■□□□□ 0.85
PDGFB-202ENST00000381551 SLC52A2Q9HAB3 445 aa20.34■□□□□ 0.85
PDGFB-202ENST00000381551 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
PDGFB-202ENST00000381551 CCDC125Q86Z20 511 aa20.33■□□□□ 0.85
PDGFB-202ENST00000381551 TMOD3Q9NYL9 352 aa20.33■□□□□ 0.85
PDGFB-202ENST00000381551 SCN11AQ9UI33 1791 aa20.33■□□□□ 0.84
PDGFB-202ENST00000381551 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.84
PDGFB-202ENST00000381551 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
PDGFB-202ENST00000381551 UPF1Q92900 1129 aaKnown RBP eCLIP20.32■□□□□ 0.84
PDGFB-202ENST00000381551 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
PDGFB-202ENST00000381551 DOT1LQ8TEK3 1739 aa20.31■□□□□ 0.84
PDGFB-202ENST00000381551 TEFQ10587 303 aa20.31■□□□□ 0.84
PDGFB-202ENST00000381551 NGEFQ8N5V2 710 aa20.31■□□□□ 0.84
PDGFB-202ENST00000381551 ITGB4P16144 1822 aa20.3■□□□□ 0.84
PDGFB-202ENST00000381551 NHSQ6T4R5 1651 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms