RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
SYNGR1-204ENST00000381535 GNAI1P63096 354 aa18.83■□□□□ 0.6
SYNGR1-204ENST00000381535 DCTN1Q14203 1278 aa18.83■□□□□ 0.6
SYNGR1-204ENST00000381535 USP21Q9UK80 565 aa18.83■□□□□ 0.6
SYNGR1-204ENST00000381535 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
SYNGR1-204ENST00000381535 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
SYNGR1-204ENST00000381535 RTF1Q92541 710 aaKnown RBP18.82■□□□□ 0.6
SYNGR1-204ENST00000381535 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
SYNGR1-204ENST00000381535 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
SYNGR1-204ENST00000381535 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
SYNGR1-204ENST00000381535 UPF1Q92900 1129 aaKnown RBP eCLIP18.81■□□□□ 0.6
SYNGR1-204ENST00000381535 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 CSB-PGBD3P0DP91 1061 aa18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 PLEKHO1Q53GL0 409 aaPredicted RBP18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 MCM10Q7L590 875 aa18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 NLRP2Q9NX02 1062 aa18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 TRPC5Q9UL62 973 aaPredicted RBP18.8■□□□□ 0.6
SYNGR1-204ENST00000381535 ERBB3P21860 1342 aa18.79■□□□□ 0.6
SYNGR1-204ENST00000381535 GNAT3A8MTJ3 354 aa18.79■□□□□ 0.6
SYNGR1-204ENST00000381535 PLIN1O60240 522 aa18.79■□□□□ 0.6
SYNGR1-204ENST00000381535 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
SYNGR1-204ENST00000381535 BCAR3O75815 825 aa18.78■□□□□ 0.6
SYNGR1-204ENST00000381535 DLG5Q8TDM6 1919 aa18.78■□□□□ 0.6
SYNGR1-204ENST00000381535 RARSP54136 660 aaKnown RBP18.77■□□□□ 0.6
SYNGR1-204ENST00000381535 AMOTQ4VCS5 1084 aa18.77■□□□□ 0.6
SYNGR1-204ENST00000381535 PPP4R2Q9NY27 417 aa18.77■□□□□ 0.6
SYNGR1-204ENST00000381535 COL18A1P39060 1754 aa18.77■□□□□ 0.6
SYNGR1-204ENST00000381535 CRYBG1Q9Y4K1 1723 aa18.77■□□□□ 0.59
SYNGR1-204ENST00000381535 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
SYNGR1-204ENST00000381535 BCL9LQ86UU0 1499 aa18.76■□□□□ 0.59
SYNGR1-204ENST00000381535 RGPD5Q99666 1765 aa18.76■□□□□ 0.59
SYNGR1-204ENST00000381535 NCAPD2Q15021 1401 aa18.75■□□□□ 0.59
SYNGR1-204ENST00000381535 CHL1O00533 1208 aa18.75■□□□□ 0.59
SYNGR1-204ENST00000381535 ABCC6O95255 1503 aa18.74■□□□□ 0.59
SYNGR1-204ENST00000381535 RGPD2P0DJD1 1756 aa18.74■□□□□ 0.59
SYNGR1-204ENST00000381535 ATRNO75882 1429 aa18.74■□□□□ 0.59
SYNGR1-204ENST00000381535 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
SYNGR1-204ENST00000381535 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
SYNGR1-204ENST00000381535 IL17REQ8NFR9 667 aa18.73■□□□□ 0.59
SYNGR1-204ENST00000381535 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
SYNGR1-204ENST00000381535 EVA1CP58658 441 aa18.72■□□□□ 0.59
SYNGR1-204ENST00000381535 AKAP4Q5JQC9 854 aa18.72■□□□□ 0.59
SYNGR1-204ENST00000381535 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
SYNGR1-204ENST00000381535 RGS12O14924 1447 aa18.72■□□□□ 0.59
SYNGR1-204ENST00000381535 CRB1P82279 1406 aa18.72■□□□□ 0.59
SYNGR1-204ENST00000381535 VAMP4O75379 141 aa18.71■□□□□ 0.59
SYNGR1-204ENST00000381535 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
SYNGR1-204ENST00000381535 EXOC6Q8TAG9 804 aa18.71■□□□□ 0.59
SYNGR1-204ENST00000381535 GJD4Q96KN9 370 aaPredicted RBP18.71■□□□□ 0.59
SYNGR1-204ENST00000381535 C1orf141Q5JVX7 400 aa18.7■□□□□ 0.58
SYNGR1-204ENST00000381535 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
SYNGR1-204ENST00000381535 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
SYNGR1-204ENST00000381535 CANXP27824 592 aaKnown RBP18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 CRBNQ96SW2 442 aa18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 CAMTA1Q9Y6Y1 1673 aa18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 SLIT2O94813 1529 aa18.69■□□□□ 0.58
SYNGR1-204ENST00000381535 ALDH1L2Q3SY69 923 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 C8orf58Q8NAV2 365 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 BCL2L13Q9BXK5 485 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 STRN4Q9NRL3 753 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
SYNGR1-204ENST00000381535 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
SYNGR1-204ENST00000381535 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
SYNGR1-204ENST00000381535 TWISTNBQ3B726 338 aaPredicted RBP18.67■□□□□ 0.58
SYNGR1-204ENST00000381535 CARD10Q9BWT7 1032 aa18.67■□□□□ 0.58
SYNGR1-204ENST00000381535 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
SYNGR1-204ENST00000381535 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
SYNGR1-204ENST00000381535 LMO7Q8WWI1 1683 aa18.66■□□□□ 0.58
SYNGR1-204ENST00000381535 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
SYNGR1-204ENST00000381535 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
SYNGR1-204ENST00000381535 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
SYNGR1-204ENST00000381535 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
SYNGR1-204ENST00000381535 ABCA3Q99758 1704 aa18.65■□□□□ 0.58
SYNGR1-204ENST00000381535 ZKSCAN2Q63HK3 967 aa18.64■□□□□ 0.57
SYNGR1-204ENST00000381535 COL5A2P05997 1499 aaPredicted RBP18.64■□□□□ 0.57
SYNGR1-204ENST00000381535 ONECUT3O60422 494 aaPredicted RBP18.63■□□□□ 0.57
SYNGR1-204ENST00000381535 VPS72Q15906 364 aa18.63■□□□□ 0.57
SYNGR1-204ENST00000381535 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
SYNGR1-204ENST00000381535 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
SYNGR1-204ENST00000381535 IPO8O15397 1037 aaKnown RBP18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 MS4A1P11836 297 aa18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 BRPF1P55201 1214 aaPredicted RBP18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 TEFQ10587 303 aa18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 MRPL50Q8N5N7 158 aaKnown RBP18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 NOB1Q9ULX3 412 aaKnown RBP18.62■□□□□ 0.57
SYNGR1-204ENST00000381535 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms