RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
RPAIN-203ENST00000381209 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
RPAIN-203ENST00000381209 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
RPAIN-203ENST00000381209 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
RPAIN-203ENST00000381209 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
RPAIN-203ENST00000381209 IGHDP01880 384 aa22.03■■□□□ 1.12
RPAIN-203ENST00000381209 NBPF6Q5VWK0 638 aa22.03■■□□□ 1.12
RPAIN-203ENST00000381209 NBPF4Q96M43 638 aa22.03■■□□□ 1.12
RPAIN-203ENST00000381209 MAP3K5Q99683 1374 aa22.02■■□□□ 1.12
RPAIN-203ENST00000381209 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
RPAIN-203ENST00000381209 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
RPAIN-203ENST00000381209 LTN1O94822 1766 aa22.01■■□□□ 1.11
RPAIN-203ENST00000381209 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
RPAIN-203ENST00000381209 TMEM57Q8N5G2 664 aa22.01■■□□□ 1.11
RPAIN-203ENST00000381209 PCDHB15Q9Y5E8 787 aa22.01■■□□□ 1.11
RPAIN-203ENST00000381209 ZBTB7CA1YPR0 619 aa22■■□□□ 1.11
RPAIN-203ENST00000381209 ITPRIPQ8IWB1 547 aa22■■□□□ 1.11
RPAIN-203ENST00000381209 ALS2Q96Q42 1657 aa21.99■■□□□ 1.11
RPAIN-203ENST00000381209 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
RPAIN-203ENST00000381209 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
RPAIN-203ENST00000381209 CHMP4BQ9H444 224 aaKnown RBP21.99■■□□□ 1.11
RPAIN-203ENST00000381209 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
RPAIN-203ENST00000381209 ANKRD24Q8TF21 1146 aa21.98■■□□□ 1.11
RPAIN-203ENST00000381209 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
RPAIN-203ENST00000381209 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
RPAIN-203ENST00000381209 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
RPAIN-203ENST00000381209 MED1Q15648 1581 aaPredicted RBP21.96■■□□□ 1.11
RPAIN-203ENST00000381209 PXDNQ92626 1479 aa21.96■■□□□ 1.11
RPAIN-203ENST00000381209 ABCC4O15439 1325 aa21.96■■□□□ 1.11
RPAIN-203ENST00000381209 SPATA31A3Q5VYP0 1347 aa21.96■■□□□ 1.11
RPAIN-203ENST00000381209 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
RPAIN-203ENST00000381209 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
RPAIN-203ENST00000381209 ZBTB40Q9NUA8 1239 aa21.96■■□□□ 1.11
RPAIN-203ENST00000381209 SOS1Q07889 1333 aaPredicted RBP21.95■■□□□ 1.1
RPAIN-203ENST00000381209 ZNF335Q9H4Z2 1342 aaPredicted RBP21.95■■□□□ 1.1
RPAIN-203ENST00000381209 PDE4AP27815 886 aa21.95■■□□□ 1.1
RPAIN-203ENST00000381209 PLEKHO1Q53GL0 409 aaPredicted RBP21.95■■□□□ 1.1
RPAIN-203ENST00000381209 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
RPAIN-203ENST00000381209 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
RPAIN-203ENST00000381209 LRRC37A3O60309 1634 aa21.94■■□□□ 1.1
RPAIN-203ENST00000381209 LRRC59Q96AG4 307 aaKnown RBP21.94■■□□□ 1.1
RPAIN-203ENST00000381209 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
RPAIN-203ENST00000381209 HDAC1Q13547 482 aaPredicted RBP21.93■■□□□ 1.1
RPAIN-203ENST00000381209 TAF7Q15545 349 aaPredicted RBP21.93■■□□□ 1.1
RPAIN-203ENST00000381209 AXIN2Q9Y2T1 843 aa21.93■■□□□ 1.1
RPAIN-203ENST00000381209 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
RPAIN-203ENST00000381209 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
RPAIN-203ENST00000381209 CEMIPQ8WUJ3 1361 aa21.92■■□□□ 1.1
RPAIN-203ENST00000381209 ZC3H6P61129 1189 aaKnown RBP21.91■■□□□ 1.1
RPAIN-203ENST00000381209 AKAP4Q5JQC9 854 aa21.91■■□□□ 1.1
RPAIN-203ENST00000381209 MIS18AQ9NYP9 233 aa21.91■■□□□ 1.1
RPAIN-203ENST00000381209 ERBB3P21860 1342 aa21.91■■□□□ 1.1
RPAIN-203ENST00000381209 PLEKHG5O94827 1062 aa21.9■■□□□ 1.1
RPAIN-203ENST00000381209 SLAIN2Q9P270 581 aa21.9■■□□□ 1.1
RPAIN-203ENST00000381209 ABCC6O95255 1503 aa21.9■■□□□ 1.1
RPAIN-203ENST00000381209 PTPRCP08575 1304 aa21.9■■□□□ 1.1
RPAIN-203ENST00000381209 CAMTA1Q9Y6Y1 1673 aa21.89■■□□□ 1.1
RPAIN-203ENST00000381209 ZBTB7BO15156 539 aaPredicted RBP21.89■■□□□ 1.09
RPAIN-203ENST00000381209 XIRP1Q702N8 1843 aaKnown RBP21.89■■□□□ 1.09
RPAIN-203ENST00000381209 CPDO75976 1380 aa21.88■■□□□ 1.09
RPAIN-203ENST00000381209 SOS2Q07890 1332 aaPredicted RBP21.87■■□□□ 1.09
RPAIN-203ENST00000381209 ZNF530Q6P9A1 599 aaPredicted RBP21.87■■□□□ 1.09
RPAIN-203ENST00000381209 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
RPAIN-203ENST00000381209 OVOS2A0A0G2JMS6 1433 aa21.86■■□□□ 1.09
RPAIN-203ENST00000381209 RGS3P49796 1198 aa21.85■■□□□ 1.09
RPAIN-203ENST00000381209 INTS3Q68E01 1043 aaKnown RBP21.85■■□□□ 1.09
RPAIN-203ENST00000381209 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
RPAIN-203ENST00000381209 FAM161AQ3B820 660 aa21.84■■□□□ 1.09
RPAIN-203ENST00000381209 C1orf141Q5JVX7 400 aa21.84■■□□□ 1.09
RPAIN-203ENST00000381209 PDZRN3Q9UPQ7 1066 aa21.84■■□□□ 1.09
RPAIN-203ENST00000381209 RGS12O14924 1447 aa21.84■■□□□ 1.09
RPAIN-203ENST00000381209 LMO7Q8WWI1 1683 aa21.84■■□□□ 1.09
RPAIN-203ENST00000381209 CCDC30Q5VVM6 783 aa21.83■■□□□ 1.09
RPAIN-203ENST00000381209 SMC5Q8IY18 1101 aa21.83■■□□□ 1.09
RPAIN-203ENST00000381209 CABLES1Q8TDN4 633 aa21.83■■□□□ 1.09
RPAIN-203ENST00000381209 STK31Q9BXU1 1019 aa21.82■■□□□ 1.08
RPAIN-203ENST00000381209 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
RPAIN-203ENST00000381209 CHMP4AQ9BY43 222 aa21.81■■□□□ 1.08
RPAIN-203ENST00000381209 RNMTO43148 476 aaKnown RBP21.8■■□□□ 1.08
RPAIN-203ENST00000381209 HOXB7P09629 217 aa21.8■■□□□ 1.08
RPAIN-203ENST00000381209 TEFQ10587 303 aa21.8■■□□□ 1.08
RPAIN-203ENST00000381209 RAPGEF4Q8WZA2 1011 aa21.8■■□□□ 1.08
RPAIN-203ENST00000381209 NLRP2Q9NX02 1062 aa21.8■■□□□ 1.08
RPAIN-203ENST00000381209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.8■■□□□ 1.082e-8■□□□□ 9.4
RPAIN-203ENST00000381209 COL18A1P39060 1754 aa21.79■■□□□ 1.08
RPAIN-203ENST00000381209 ANP32AP39687 249 aaKnown RBP21.79■■□□□ 1.08
RPAIN-203ENST00000381209 TATP17735 454 aaPredicted RBP21.78■■□□□ 1.08
RPAIN-203ENST00000381209 C8orf34Q49A92 452 aa21.78■■□□□ 1.08
RPAIN-203ENST00000381209 CSB-PGBD3P0DP91 1061 aa21.77■■□□□ 1.08
RPAIN-203ENST00000381209 EIF4A1P60842 406 aaKnown RBP21.77■■□□□ 1.08
RPAIN-203ENST00000381209 MPRIPQ6WCQ1 1025 aa21.77■■□□□ 1.08
RPAIN-203ENST00000381209 CRYBG1Q9Y4K1 1723 aa21.77■■□□□ 1.08
RPAIN-203ENST00000381209 RGPD2P0DJD1 1756 aa21.77■■□□□ 1.08
RPAIN-203ENST00000381209 CHRNA2Q15822 529 aa21.76■■□□□ 1.07
RPAIN-203ENST00000381209 SPG7Q9UQ90 795 aa21.76■■□□□ 1.07
RPAIN-203ENST00000381209 BTBD11A6QL63 1104 aa21.75■■□□□ 1.07
RPAIN-203ENST00000381209 CCT4P50991 539 aaKnown RBP21.75■■□□□ 1.07
RPAIN-203ENST00000381209 G2E3Q7L622 706 aa21.75■■□□□ 1.07
RPAIN-203ENST00000381209 GCC1Q96CN9 775 aa21.75■■□□□ 1.07
RPAIN-203ENST00000381209 FLIIQ13045 1269 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms