RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 GNAT3A8MTJ3 354 aa27.56■■■□□ 2
GMDS-202ENST00000380815 TSPYL6Q8N831 410 aa27.56■■■□□ 2
GMDS-202ENST00000380815 ANKRD24Q8TF21 1146 aa27.56■■■□□ 2
GMDS-202ENST00000380815 RLBP1P12271 317 aa27.55■■■□□ 2
GMDS-202ENST00000380815 TWISTNBQ3B726 338 aaPredicted RBP27.55■■■□□ 2
GMDS-202ENST00000380815 AXIN2Q9Y2T1 843 aa27.55■■■□□ 2
GMDS-202ENST00000380815 ZC3H6P61129 1189 aaKnown RBP27.55■■■□□ 2
GMDS-202ENST00000380815 SOS2Q07890 1332 aaPredicted RBP27.54■■■□□ 2
GMDS-202ENST00000380815 MAP3K5Q99683 1374 aa27.54■■■□□ 2
GMDS-202ENST00000380815 IPO8O15397 1037 aaKnown RBP27.54■■■□□ 2
GMDS-202ENST00000380815 DZIP1LQ8IYY4 767 aaKnown RBP27.54■■■□□ 2
GMDS-202ENST00000380815 C8orf58Q8NAV2 365 aa27.54■■■□□ 2
GMDS-202ENST00000380815 LRRC59Q96AG4 307 aaKnown RBP27.54■■■□□ 2
GMDS-202ENST00000380815 ATF7IPQ6VMQ6 1270 aa27.53■■■□□ 2
GMDS-202ENST00000380815 NOB1Q9ULX3 412 aaKnown RBP27.53■■■□□ 2
GMDS-202ENST00000380815 TNNQ9UQP3 1299 aa27.53■■■□□ 2
GMDS-202ENST00000380815 RGPD2P0DJD1 1756 aa27.53■■■□□ 2
GMDS-202ENST00000380815 CAMTA1Q9Y6Y1 1673 aa27.53■■■□□ 2
GMDS-202ENST00000380815 KIAA0232Q92628 1395 aa27.53■■■□□ 2
GMDS-202ENST00000380815 KDM2BQ8NHM5 1336 aa27.52■■■□□ 2
GMDS-202ENST00000380815 CRYBG1Q9Y4K1 1723 aa27.52■■■□□ 2
GMDS-202ENST00000380815 LRRC37A3O60309 1634 aa27.52■■■□□ 2
GMDS-202ENST00000380815 TRIM27P14373 513 aa27.52■■■□□ 2
GMDS-202ENST00000380815 HAP1P54257 671 aaPredicted RBP27.52■■■□□ 2
GMDS-202ENST00000380815 FTSJ3Q8IY81 847 aaKnown RBP27.52■■■□□ 2
GMDS-202ENST00000380815 ABCC6O95255 1503 aa27.52■■■□□ 2
GMDS-202ENST00000380815 CLUAP1Q96AJ1 413 aa27.51■■□□□ 1.99
GMDS-202ENST00000380815 ERBB3P21860 1342 aa27.51■■□□□ 1.99
GMDS-202ENST00000380815 CENPQQ7L2Z9 268 aaPredicted RBP27.5■■□□□ 1.99
GMDS-202ENST00000380815 ELL2O00472 640 aaPredicted RBP27.49■■□□□ 1.99
GMDS-202ENST00000380815 MVPQ14764 893 aaKnown RBP27.49■■□□□ 1.99
GMDS-202ENST00000380815 MRPL50Q8N5N7 158 aaKnown RBP27.49■■□□□ 1.99
GMDS-202ENST00000380815 CABLES1Q8TDN4 633 aa27.49■■□□□ 1.99
GMDS-202ENST00000380815 CPDO75976 1380 aa27.49■■□□□ 1.99
GMDS-202ENST00000380815 COL18A1P39060 1754 aa27.48■■□□□ 1.99
GMDS-202ENST00000380815 ARHGAP45Q92619 1136 aa27.48■■□□□ 1.99
GMDS-202ENST00000380815 RGPD5Q99666 1765 aa27.48■■□□□ 1.99
GMDS-202ENST00000380815 AMOTQ4VCS5 1084 aa27.47■■□□□ 1.99
GMDS-202ENST00000380815 LMO7Q8WWI1 1683 aa27.46■■□□□ 1.99
GMDS-202ENST00000380815 PLEKHO1Q53GL0 409 aaPredicted RBP27.46■■□□□ 1.99
GMDS-202ENST00000380815 IL17REQ8NFR9 667 aa27.46■■□□□ 1.99
GMDS-202ENST00000380815 BABAM1Q9NWV8 329 aa27.46■■□□□ 1.99
GMDS-202ENST00000380815 TSPYL4Q9UJ04 414 aa27.45■■□□□ 1.99
GMDS-202ENST00000380815 CEMIPQ8WUJ3 1361 aa27.43■■□□□ 1.98
GMDS-202ENST00000380815 MIS18AQ9NYP9 233 aa27.43■■□□□ 1.98
GMDS-202ENST00000380815 NHSL1Q5SYE7 1610 aa27.42■■□□□ 1.98
GMDS-202ENST00000380815 DDX19BQ9UMR2 479 aa27.42■■□□□ 1.98
GMDS-202ENST00000380815 AKAP4Q5JQC9 854 aa27.41■■□□□ 1.98
GMDS-202ENST00000380815 TAF7Q15545 349 aaPredicted RBP27.4■■□□□ 1.98
GMDS-202ENST00000380815 KRT24Q2M2I5 525 aa27.4■■□□□ 1.98
GMDS-202ENST00000380815 ZNF530Q6P9A1 599 aaPredicted RBP27.39■■□□□ 1.98
GMDS-202ENST00000380815 FAM208AQ9UK61 1670 aaKnown RBP27.39■■□□□ 1.97
GMDS-202ENST00000380815 TMEM57Q8N5G2 664 aa27.38■■□□□ 1.97
GMDS-202ENST00000380815 CHRNA2Q15822 529 aa27.37■■□□□ 1.97
GMDS-202ENST00000380815 ITPRIPQ8IWB1 547 aa27.37■■□□□ 1.97
GMDS-202ENST00000380815 NLRP2Q9NX02 1062 aa27.37■■□□□ 1.97
GMDS-202ENST00000380815 PLEKHG2Q9H7P9 1386 aa27.36■■□□□ 1.97
GMDS-202ENST00000380815 TCERG1O14776 1098 aaKnown RBP27.36■■□□□ 1.97
GMDS-202ENST00000380815 SOS1Q07889 1333 aaPredicted RBP27.35■■□□□ 1.97
GMDS-202ENST00000380815 OVOS2A0A0G2JMS6 1433 aa27.35■■□□□ 1.97
GMDS-202ENST00000380815 IGHDP01880 384 aa27.35■■□□□ 1.97
GMDS-202ENST00000380815 C1orf141Q5JVX7 400 aa27.35■■□□□ 1.97
GMDS-202ENST00000380815 API5Q9BZZ5 524 aaKnown RBP27.35■■□□□ 1.97
GMDS-202ENST00000380815 CSB-PGBD3P0DP91 1061 aa27.34■■□□□ 1.97
GMDS-202ENST00000380815 PCDHB15Q9Y5E8 787 aa27.34■■□□□ 1.97
GMDS-202ENST00000380815 RAPGEF4Q8WZA2 1011 aa27.33■■□□□ 1.97
GMDS-202ENST00000380815 LGR6Q9HBX8 967 aa27.33■■□□□ 1.97
GMDS-202ENST00000380815 RBM19Q9Y4C8 960 aaKnown RBP27.33■■□□□ 1.97
GMDS-202ENST00000380815 ABCC4O15439 1325 aa27.33■■□□□ 1.97
GMDS-202ENST00000380815 LTBP4Q8N2S1 1624 aa27.33■■□□□ 1.97
GMDS-202ENST00000380815 PRDM11Q9NQV5 511 aa27.32■■□□□ 1.96
GMDS-202ENST00000380815 ABCA3Q99758 1704 aa27.31■■□□□ 1.96
GMDS-202ENST00000380815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.31■■□□□ 1.961e-14■□□□□ 9.5
GMDS-202ENST00000380815 CHMP4BQ9H444 224 aaKnown RBP27.3■■□□□ 1.96
GMDS-202ENST00000380815 TATP17735 454 aaPredicted RBP27.3■■□□□ 1.96
GMDS-202ENST00000380815 ZBTB40Q9NUA8 1239 aa27.3■■□□□ 1.96
GMDS-202ENST00000380815 RNMTO43148 476 aaKnown RBP27.29■■□□□ 1.96
GMDS-202ENST00000380815 MPRIPQ6WCQ1 1025 aa27.29■■□□□ 1.96
GMDS-202ENST00000380815 PTPRCP08575 1304 aa27.28■■□□□ 1.96
GMDS-202ENST00000380815 TEFQ10587 303 aa27.28■■□□□ 1.96
GMDS-202ENST00000380815 RWDD1Q9H446 243 aaPredicted RBP27.28■■□□□ 1.96
GMDS-202ENST00000380815 SLC4A2P04920 1241 aa27.26■■□□□ 1.95
GMDS-202ENST00000380815 SPG7Q9UQ90 795 aa27.26■■□□□ 1.95
GMDS-202ENST00000380815 MEGF6O75095 1541 aa27.26■■□□□ 1.95
GMDS-202ENST00000380815 ADAMTS7Q9UKP4 1686 aa27.26■■□□□ 1.95
GMDS-202ENST00000380815 WDR17Q8IZU2 1322 aa27.25■■□□□ 1.95
GMDS-202ENST00000380815 ROBO1Q9Y6N7 1651 aa27.25■■□□□ 1.95
GMDS-202ENST00000380815 KDM3BQ7LBC6 1761 aa27.24■■□□□ 1.95
GMDS-202ENST00000380815 ZBTB7BO15156 539 aaPredicted RBP27.24■■□□□ 1.95
GMDS-202ENST00000380815 CCDC30Q5VVM6 783 aa27.24■■□□□ 1.95
GMDS-202ENST00000380815 RGS12O14924 1447 aa27.24■■□□□ 1.95
GMDS-202ENST00000380815 COL5A2P05997 1499 aaPredicted RBP27.23■■□□□ 1.95
GMDS-202ENST00000380815 AHDC1Q5TGY3 1603 aaPredicted RBP27.23■■□□□ 1.95
GMDS-202ENST00000380815 HDAC1Q13547 482 aaPredicted RBP27.22■■□□□ 1.95
GMDS-202ENST00000380815 STK31Q9BXU1 1019 aa27.22■■□□□ 1.95
GMDS-202ENST00000380815 VIRMAQ69YN4 1812 aaKnown RBP27.22■■□□□ 1.95
GMDS-202ENST00000380815 BTBD11A6QL63 1104 aa27.22■■□□□ 1.95
GMDS-202ENST00000380815 SKAP1Q86WV1 359 aa27.22■■□□□ 1.95
GMDS-202ENST00000380815 HOXB7P09629 217 aa27.21■■□□□ 1.95
GMDS-202ENST00000380815 EIF4A1P60842 406 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 1803.2 ms