RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
SMN1-202ENST00000380707 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
SMN1-202ENST00000380707 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
SMN1-202ENST00000380707 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
SMN1-202ENST00000380707 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
SMN1-202ENST00000380707 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMN1-202ENST00000380707 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
SMN1-202ENST00000380707 OVOS2A0A0G2JMS6 1433 aa16.88■□□□□ 0.29
SMN1-202ENST00000380707 RGS12O14924 1447 aa16.88■□□□□ 0.29
SMN1-202ENST00000380707 FCHSD2O94868 740 aa16.88■□□□□ 0.29
SMN1-202ENST00000380707 EXOC5O00471 708 aa16.87■□□□□ 0.29
SMN1-202ENST00000380707 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
SMN1-202ENST00000380707 DDB1Q16531 1140 aa16.87■□□□□ 0.29
SMN1-202ENST00000380707 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
SMN1-202ENST00000380707 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
SMN1-202ENST00000380707 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
SMN1-202ENST00000380707 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
SMN1-202ENST00000380707 PLEKHF1Q96S99 279 aa16.85■□□□□ 0.29
SMN1-202ENST00000380707 TNS2Q63HR2 1409 aa16.84■□□□□ 0.29
SMN1-202ENST00000380707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMN1-202ENST00000380707 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.28
SMN1-202ENST00000380707 PDE3BQ13370 1112 aa16.83■□□□□ 0.28
SMN1-202ENST00000380707 PLEKHO1Q53GL0 409 aaPredicted RBP16.83■□□□□ 0.28
SMN1-202ENST00000380707 FAM9BQ8IZU0 186 aa16.83■□□□□ 0.28
SMN1-202ENST00000380707 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.28
SMN1-202ENST00000380707 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.28
SMN1-202ENST00000380707 SPG7Q9UQ90 795 aa16.83■□□□□ 0.28
SMN1-202ENST00000380707 BRWD3Q6RI45 1802 aa16.83■□□□□ 0.28
SMN1-202ENST00000380707 MTHFSDQ2M296 383 aaKnown RBP16.82■□□□□ 0.28
SMN1-202ENST00000380707 AMOTQ4VCS5 1084 aa16.82■□□□□ 0.28
SMN1-202ENST00000380707 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
SMN1-202ENST00000380707 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
SMN1-202ENST00000380707 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
SMN1-202ENST00000380707 CYP27B1O15528 508 aa16.81■□□□□ 0.28
SMN1-202ENST00000380707 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
SMN1-202ENST00000380707 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
SMN1-202ENST00000380707 SHANK3Q9BYB0 1731 aa16.81■□□□□ 0.28
SMN1-202ENST00000380707 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
SMN1-202ENST00000380707 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
SMN1-202ENST00000380707 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
SMN1-202ENST00000380707 PHKG2P15735 406 aa16.79■□□□□ 0.28
SMN1-202ENST00000380707 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
SMN1-202ENST00000380707 ILDR2Q71H61 639 aa16.78■□□□□ 0.28
SMN1-202ENST00000380707 IFNL2Q8IZJ0 200 aa16.78■□□□□ 0.28
SMN1-202ENST00000380707 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
SMN1-202ENST00000380707 NEFMP07197 916 aa16.77■□□□□ 0.28
SMN1-202ENST00000380707 POTEHQ6S545 545 aa16.77■□□□□ 0.28
SMN1-202ENST00000380707 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
SMN1-202ENST00000380707 NKX1-1Q15270 411 aaPredicted RBP16.75■□□□□ 0.27
SMN1-202ENST00000380707 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
SMN1-202ENST00000380707 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
SMN1-202ENST00000380707 NFE2L2Q16236 605 aa16.75■□□□□ 0.27
SMN1-202ENST00000380707 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
SMN1-202ENST00000380707 APAF1O14727 1248 aa16.74■□□□□ 0.27
SMN1-202ENST00000380707 MPRIPQ6WCQ1 1025 aa16.74■□□□□ 0.27
SMN1-202ENST00000380707 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
SMN1-202ENST00000380707 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
SMN1-202ENST00000380707 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SMN1-202ENST00000380707 TMPOP42166 694 aaKnown RBP16.73■□□□□ 0.27
SMN1-202ENST00000380707 BCL9O00512 1426 aa16.73■□□□□ 0.27
SMN1-202ENST00000380707 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
SMN1-202ENST00000380707 RIPK4P57078 832 aa16.72■□□□□ 0.27
SMN1-202ENST00000380707 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
SMN1-202ENST00000380707 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
SMN1-202ENST00000380707 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
SMN1-202ENST00000380707 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
SMN1-202ENST00000380707 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
SMN1-202ENST00000380707 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
SMN1-202ENST00000380707 IL17REQ8NFR9 667 aa16.7■□□□□ 0.26
SMN1-202ENST00000380707 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
SMN1-202ENST00000380707 KCNQ2O43526 872 aa16.7■□□□□ 0.26
SMN1-202ENST00000380707 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
SMN1-202ENST00000380707 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
SMN1-202ENST00000380707 PRIM1P49642 420 aaKnown RBP16.69■□□□□ 0.26
SMN1-202ENST00000380707 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
SMN1-202ENST00000380707 MCM10Q7L590 875 aa16.69■□□□□ 0.26
SMN1-202ENST00000380707 TOGARAM1Q9Y4F4 1720 aa16.69■□□□□ 0.26
SMN1-202ENST00000380707 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
SMN1-202ENST00000380707 TRIM37O94972 964 aa16.68■□□□□ 0.26
SMN1-202ENST00000380707 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
SMN1-202ENST00000380707 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
SMN1-202ENST00000380707 TRIM35Q9UPQ4 493 aa16.68■□□□□ 0.26
SMN1-202ENST00000380707 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
SMN1-202ENST00000380707 ERVV-2B6SEH9 535 aa16.67■□□□□ 0.26
SMN1-202ENST00000380707 SBF2Q86WG5 1849 aa16.67■□□□□ 0.26
SMN1-202ENST00000380707 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
SMN1-202ENST00000380707 ADAMTS7Q9UKP4 1686 aa16.67■□□□□ 0.26
SMN1-202ENST00000380707 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
SMN1-202ENST00000380707 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
SMN1-202ENST00000380707 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
SMN1-202ENST00000380707 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
SMN1-202ENST00000380707 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
SMN1-202ENST00000380707 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
SMN1-202ENST00000380707 CABP4P57796 275 aa16.65■□□□□ 0.26
SMN1-202ENST00000380707 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
SMN1-202ENST00000380707 PIGBQ92521 554 aa16.65■□□□□ 0.26
SMN1-202ENST00000380707 SLC52A2Q9HAB3 445 aa16.65■□□□□ 0.26
SMN1-202ENST00000380707 NHSQ6T4R5 1651 aa16.64■□□□□ 0.25
SMN1-202ENST00000380707 VIRMAQ69YN4 1812 aaKnown RBP16.64■□□□□ 0.25
SMN1-202ENST00000380707 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms