RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SDSP20132 328 aa13.74□□□□□ -0.21
SMAD9-202ENST00000379826 ZGPATQ8N5A5 531 aaKnown RBP13.74□□□□□ -0.21
SMAD9-202ENST00000379826 KRT24Q2M2I5 525 aa13.74□□□□□ -0.21
SMAD9-202ENST00000379826 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
SMAD9-202ENST00000379826 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
SMAD9-202ENST00000379826 RPAP2Q8IXW5 612 aaPredicted RBP13.74□□□□□ -0.21
SMAD9-202ENST00000379826 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
SMAD9-202ENST00000379826 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
SMAD9-202ENST00000379826 STRN4Q9NRL3 753 aa13.74□□□□□ -0.21
SMAD9-202ENST00000379826 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
SMAD9-202ENST00000379826 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
SMAD9-202ENST00000379826 VAMP4O75379 141 aa13.73□□□□□ -0.21
SMAD9-202ENST00000379826 TRPM2O94759 1503 aa13.73□□□□□ -0.21
SMAD9-202ENST00000379826 LMTK3Q96Q04 1460 aa13.73□□□□□ -0.21
SMAD9-202ENST00000379826 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
SMAD9-202ENST00000379826 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
SMAD9-202ENST00000379826 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
SMAD9-202ENST00000379826 UNC13BO14795 1591 aa13.72□□□□□ -0.21
SMAD9-202ENST00000379826 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 IFIT2P09913 472 aaKnown RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 NUDT16Q96DE0 195 aaKnown RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 PLEKHM2Q8IWE5 1019 aa13.72□□□□□ -0.21
SMAD9-202ENST00000379826 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-202ENST00000379826 CD2BP2O95400 341 aaKnown RBP13.71□□□□□ -0.21
SMAD9-202ENST00000379826 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 MEIS3Q99687 375 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 MADDQ8WXG6 1647 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 H3BQV1 296 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 IFFO2Q5TF58 517 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 GAS2L3Q86XJ1 694 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.21
SMAD9-202ENST00000379826 CLTCL1P53675 1640 aa13.71□□□□□ -0.22
SMAD9-202ENST00000379826 POLKQ9UBT6 870 aa13.71□□□□□ -0.22
SMAD9-202ENST00000379826 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
SMAD9-202ENST00000379826 MX1P20591 662 aa13.7□□□□□ -0.22
SMAD9-202ENST00000379826 GNAI3P08754 354 aa13.7□□□□□ -0.22
SMAD9-202ENST00000379826 MCM2P49736 904 aa13.7□□□□□ -0.22
SMAD9-202ENST00000379826 CWC27Q6UX04 472 aaKnown RBP13.7□□□□□ -0.22
SMAD9-202ENST00000379826 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
SMAD9-202ENST00000379826 ZMYND15Q9H091 742 aa13.7□□□□□ -0.22
SMAD9-202ENST00000379826 DDX54Q8TDD1 881 aaKnown RBP13.7□□□□□ -0.22
SMAD9-202ENST00000379826 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
SMAD9-202ENST00000379826 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-202ENST00000379826 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-202ENST00000379826 ZKSCAN1P17029 563 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-202ENST00000379826 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
SMAD9-202ENST00000379826 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
SMAD9-202ENST00000379826 FSD2A1L4K1 749 aa13.68□□□□□ -0.22
SMAD9-202ENST00000379826 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
SMAD9-202ENST00000379826 RUFY2Q8WXA3 655 aa13.68□□□□□ -0.22
SMAD9-202ENST00000379826 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
SMAD9-202ENST00000379826 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
SMAD9-202ENST00000379826 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
SMAD9-202ENST00000379826 RBSNQ9H1K0 784 aa13.67□□□□□ -0.22
SMAD9-202ENST00000379826 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
SMAD9-202ENST00000379826 STK3Q13188 491 aa13.67□□□□□ -0.22
SMAD9-202ENST00000379826 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
SMAD9-202ENST00000379826 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
SMAD9-202ENST00000379826 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 TEFQ10587 303 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 PKP1Q13835 747 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
SMAD9-202ENST00000379826 MSH6P52701 1360 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
SMAD9-202ENST00000379826 GSPT1P15170 499 aaKnown RBP13.66□□□□□ -0.22
SMAD9-202ENST00000379826 CAMK4Q16566 473 aa13.66□□□□□ -0.22
SMAD9-202ENST00000379826 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
SMAD9-202ENST00000379826 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 NLRP6P59044 892 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 LAMC1P11047 1609 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 CEBPZQ03701 1054 aaKnown RBP13.65□□□□□ -0.22
SMAD9-202ENST00000379826 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
SMAD9-202ENST00000379826 ABCC1P33527 1531 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 WASLO00401 505 aaPredicted RBP13.64□□□□□ -0.23
SMAD9-202ENST00000379826 SRGAP3O43295 1099 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 CCDC83Q8IWF9 413 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
SMAD9-202ENST00000379826 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
SMAD9-202ENST00000379826 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
SMAD9-202ENST00000379826 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
SMAD9-202ENST00000379826 SHROOM2Q13796 1616 aa13.63□□□□□ -0.23
SMAD9-202ENST00000379826 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
SMAD9-202ENST00000379826 PDE1AP54750 535 aa13.63□□□□□ -0.23
SMAD9-202ENST00000379826 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD9-202ENST00000379826 ZNF771Q7L3S4 317 aaPredicted RBP13.63□□□□□ -0.23
SMAD9-202ENST00000379826 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
SMAD9-202ENST00000379826 SPHKAPQ2M3C7 1700 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms