RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 DDX11Q96FC9 970 aa15.51■□□□□ 0.07
HIPK3-202ENST00000379016 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
HIPK3-202ENST00000379016 ATP2C2O75185 946 aa15.51■□□□□ 0.07
HIPK3-202ENST00000379016 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
HIPK3-202ENST00000379016 RPUSD2Q8IZ73 545 aaKnown RBP15.5■□□□□ 0.07
HIPK3-202ENST00000379016 SIL1Q9H173 461 aa15.5■□□□□ 0.07
HIPK3-202ENST00000379016 TERF1P54274 439 aa15.5■□□□□ 0.07
HIPK3-202ENST00000379016 SPTY2D1Q68D10 685 aaPredicted RBP15.5■□□□□ 0.07
HIPK3-202ENST00000379016 FKBP4Q02790 459 aaKnown RBP eCLIP15.5■□□□□ 0.07
HIPK3-202ENST00000379016 BICDL1Q6ZP65 573 aa15.5■□□□□ 0.07
HIPK3-202ENST00000379016 CASQ1P31415 396 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 HLTFQ14527 1009 aaKnown RBP eCLIP15.49■□□□□ 0.07
HIPK3-202ENST00000379016 MAP7D1Q3KQU3 841 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 TSHZ2Q9NRE2 1034 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 TDO2P48775 406 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 A0A1W2PRG0 241 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 POLR3GO15318 223 aaPredicted RBP15.49■□□□□ 0.07
HIPK3-202ENST00000379016 NACAP1Q9BZK3 213 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 IKBKGQ9Y6K9 419 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
HIPK3-202ENST00000379016 EFCAB2Q5VUJ9 269 aa15.49■□□□□ 0.07
HIPK3-202ENST00000379016 CCDC192P0DO97 292 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 KIF5CO60282 957 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 NEK4P51957 841 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 CCDC6Q16204 474 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 KLHL10Q6JEL2 608 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 FILIP1Q7Z7B0 1213 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 SURF6O75683 361 aaKnown RBP15.48■□□□□ 0.07
HIPK3-202ENST00000379016 MPHOSPH8Q99549 860 aa15.48■□□□□ 0.07
HIPK3-202ENST00000379016 NOL3O60936 208 aaKnown RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 NOP2P46087 812 aaKnown RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 PDCP20941 246 aa15.47■□□□□ 0.07
HIPK3-202ENST00000379016 IMMTQ16891 758 aaKnown RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 API5Q9BZZ5 524 aaKnown RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 FEZ2Q9UHY8 353 aaPredicted RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 SMC1BQ8NDV3 1235 aa15.47■□□□□ 0.07
HIPK3-202ENST00000379016 SREK1Q8WXA9 508 aaKnown RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 FAM107BQ9H098 131 aa15.47■□□□□ 0.07
HIPK3-202ENST00000379016 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 V9GYY5 206 aaPredicted RBP15.47■□□□□ 0.07
HIPK3-202ENST00000379016 APAF1O14727 1248 aa15.46■□□□□ 0.07
HIPK3-202ENST00000379016 MICALCLQ6ZW33 695 aa15.46■□□□□ 0.07
HIPK3-202ENST00000379016 CCDC63Q8NA47 563 aa15.46■□□□□ 0.07
HIPK3-202ENST00000379016 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
HIPK3-202ENST00000379016 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.07
HIPK3-202ENST00000379016 TMOD2Q9NZR1 351 aa15.46■□□□□ 0.07
HIPK3-202ENST00000379016 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
HIPK3-202ENST00000379016 TRAK2O60296 914 aa15.46■□□□□ 0.06
HIPK3-202ENST00000379016 TSG101Q99816 390 aa15.46■□□□□ 0.06
HIPK3-202ENST00000379016 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.06
HIPK3-202ENST00000379016 CFAP100Q494V2 611 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 PRPF31Q8WWY3 499 aaKnown RBP15.45■□□□□ 0.06
HIPK3-202ENST00000379016 MMRN2Q9H8L6 949 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 SEC63Q9UGP8 760 aaKnown RBP15.45■□□□□ 0.06
HIPK3-202ENST00000379016 MRE11P49959 708 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 UBAC1Q9BSL1 405 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 ERCC3P19447 782 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 MAP9Q49MG5 647 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 CCDC85AQ96PX6 553 aaPredicted RBP15.45■□□□□ 0.06
HIPK3-202ENST00000379016 BANK1Q8NDB2 785 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 RFX1P22670 979 aa15.45■□□□□ 0.06
HIPK3-202ENST00000379016 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
HIPK3-202ENST00000379016 CRACR2BQ8N4Y2 399 aaPredicted RBP15.45■□□□□ 0.06
HIPK3-202ENST00000379016 NAA25Q14CX7 972 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 KIF20AO95235 890 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
HIPK3-202ENST00000379016 VPS36Q86VN1 386 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 CCDC144CPQ8IYA2 1237 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 TDRD12Q587J7 1177 aaKnown RBP15.44■□□□□ 0.06
HIPK3-202ENST00000379016 UBXN4Q92575 508 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 EPSTI1Q96J88 318 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 PFDN4Q9NQP4 134 aa15.44■□□□□ 0.06
HIPK3-202ENST00000379016 ST20-MTHFSA0A0A6YYL1 179 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 SYNCQ9H7C4 482 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 FKBP15Q5T1M5 1219 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 LRRC45Q96CN5 670 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 ERCC5P28715 1186 aaPredicted RBP15.43■□□□□ 0.06
HIPK3-202ENST00000379016 EEA1Q15075 1411 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 BIRC2Q13490 618 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 MAATS1Q7Z4T9 603 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 SIRT1Q96EB6 747 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 C1orf115Q9H7X2 142 aa15.43■□□□□ 0.06
HIPK3-202ENST00000379016 KIF3CO14782 793 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 PRC1O43663 620 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 CDC45O75419 566 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 MYL6BP14649 208 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 UPF3BQ9BZI7 483 aaKnown RBP15.42■□□□□ 0.06
HIPK3-202ENST00000379016 HIP1O00291 1037 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 LRP2BPQ9P2M1 347 aa15.42■□□□□ 0.06
HIPK3-202ENST00000379016 ACTN2P35609 894 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 ZBTB16Q05516 673 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 SPECC1LQ69YQ0 1117 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 RSPH3Q86UC2 560 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms