RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
UPK1A-202ENST00000379013 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
UPK1A-202ENST00000379013 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
UPK1A-202ENST00000379013 TNS2Q63HR2 1409 aa18.64■□□□□ 0.57
UPK1A-202ENST00000379013 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
UPK1A-202ENST00000379013 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
UPK1A-202ENST00000379013 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
UPK1A-202ENST00000379013 PDGFDQ9GZP0 370 aaPredicted RBP18.62■□□□□ 0.57
UPK1A-202ENST00000379013 FAM208AQ9UK61 1670 aaKnown RBP18.61■□□□□ 0.57
UPK1A-202ENST00000379013 FLT4P35916 1363 aa18.61■□□□□ 0.57
UPK1A-202ENST00000379013 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
UPK1A-202ENST00000379013 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
UPK1A-202ENST00000379013 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
UPK1A-202ENST00000379013 TXNRD1Q16881 649 aa18.59■□□□□ 0.57
UPK1A-202ENST00000379013 RREB1Q92766 1687 aa18.59■□□□□ 0.57
UPK1A-202ENST00000379013 NUP188Q5SRE5 1749 aa18.58■□□□□ 0.57
UPK1A-202ENST00000379013 POLKQ9UBT6 870 aa18.58■□□□□ 0.56
UPK1A-202ENST00000379013 MEGF6O75095 1541 aa18.58■□□□□ 0.56
UPK1A-202ENST00000379013 INSRP06213 1382 aa18.57■□□□□ 0.56
UPK1A-202ENST00000379013 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
UPK1A-202ENST00000379013 MTHFSP49914 203 aa18.56■□□□□ 0.56
UPK1A-202ENST00000379013 NBPF14Q5TI25 921 aa18.56■□□□□ 0.56
UPK1A-202ENST00000379013 ZCRB1Q8TBF4 217 aaKnown RBP18.56■□□□□ 0.56
UPK1A-202ENST00000379013 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
UPK1A-202ENST00000379013 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
UPK1A-202ENST00000379013 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
UPK1A-202ENST00000379013 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
UPK1A-202ENST00000379013 KCNQ4P56696 695 aa18.52■□□□□ 0.56
UPK1A-202ENST00000379013 MIER1Q8N108 512 aa18.52■□□□□ 0.56
UPK1A-202ENST00000379013 EYA1Q99502 592 aa18.52■□□□□ 0.56
UPK1A-202ENST00000379013 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
UPK1A-202ENST00000379013 LRP5O75197 1615 aa18.5■□□□□ 0.55
UPK1A-202ENST00000379013 CYP27B1O15528 508 aa18.5■□□□□ 0.55
UPK1A-202ENST00000379013 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
UPK1A-202ENST00000379013 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
UPK1A-202ENST00000379013 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
UPK1A-202ENST00000379013 EIF4A2Q14240 407 aaKnown RBP18.48■□□□□ 0.55
UPK1A-202ENST00000379013 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
UPK1A-202ENST00000379013 SLC15A2Q16348 729 aa18.48■□□□□ 0.55
UPK1A-202ENST00000379013 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
UPK1A-202ENST00000379013 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
UPK1A-202ENST00000379013 SHANK3Q9BYB0 1731 aa18.48■□□□□ 0.55
UPK1A-202ENST00000379013 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
UPK1A-202ENST00000379013 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
UPK1A-202ENST00000379013 PNNQ9H307 717 aaKnown RBP18.47■□□□□ 0.55
UPK1A-202ENST00000379013 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
UPK1A-202ENST00000379013 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
UPK1A-202ENST00000379013 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
UPK1A-202ENST00000379013 BTAF1O14981 1849 aa18.46■□□□□ 0.55
UPK1A-202ENST00000379013 UTRNP46939 3433 aa18.45■□□□□ 0.54
UPK1A-202ENST00000379013 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
UPK1A-202ENST00000379013 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
UPK1A-202ENST00000379013 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
UPK1A-202ENST00000379013 NEFMP07197 916 aa18.43■□□□□ 0.54
UPK1A-202ENST00000379013 PTGER2P43116 358 aa18.43■□□□□ 0.54
UPK1A-202ENST00000379013 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
UPK1A-202ENST00000379013 SPON1Q9HCB6 807 aa18.43■□□□□ 0.54
UPK1A-202ENST00000379013 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
UPK1A-202ENST00000379013 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
UPK1A-202ENST00000379013 IL13P35225 146 aa18.4■□□□□ 0.54
UPK1A-202ENST00000379013 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
UPK1A-202ENST00000379013 CASZ1Q86V15 1759 aa18.4■□□□□ 0.54
UPK1A-202ENST00000379013 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.53
UPK1A-202ENST00000379013 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.53
UPK1A-202ENST00000379013 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
UPK1A-202ENST00000379013 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
UPK1A-202ENST00000379013 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
UPK1A-202ENST00000379013 PIGBQ92521 554 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
UPK1A-202ENST00000379013 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
UPK1A-202ENST00000379013 FCHSD2O94868 740 aa18.36■□□□□ 0.53
UPK1A-202ENST00000379013 KDRP35968 1356 aa18.36■□□□□ 0.53
UPK1A-202ENST00000379013 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
UPK1A-202ENST00000379013 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
UPK1A-202ENST00000379013 PHKG2P15735 406 aa18.35■□□□□ 0.53
UPK1A-202ENST00000379013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
UPK1A-202ENST00000379013 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
UPK1A-202ENST00000379013 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
UPK1A-202ENST00000379013 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
UPK1A-202ENST00000379013 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
UPK1A-202ENST00000379013 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
UPK1A-202ENST00000379013 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
UPK1A-202ENST00000379013 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
UPK1A-202ENST00000379013 SULT6B1Q6IMI4 303 aa18.33■□□□□ 0.52
UPK1A-202ENST00000379013 MTFR1LQ9H019 292 aa18.33■□□□□ 0.52
UPK1A-202ENST00000379013 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
UPK1A-202ENST00000379013 PPP1R1BQ9UD71 204 aaPredicted RBP18.32■□□□□ 0.52
UPK1A-202ENST00000379013 ASAP1Q9ULH1 1129 aa18.32■□□□□ 0.52
UPK1A-202ENST00000379013 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
UPK1A-202ENST00000379013 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
UPK1A-202ENST00000379013 ADAMTS8Q9UP79 889 aa18.31■□□□□ 0.52
UPK1A-202ENST00000379013 LY75O60449 1722 aa18.3■□□□□ 0.52
UPK1A-202ENST00000379013 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
UPK1A-202ENST00000379013 NGEFQ8N5V2 710 aa18.3■□□□□ 0.52
UPK1A-202ENST00000379013 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms