RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 TNNQ9UQP3 1299 aa13.96□□□□□ -0.17
NPHS1-202ENST00000378910 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.18
NPHS1-202ENST00000378910 AP1ARQ63HQ0 302 aa13.96□□□□□ -0.18
NPHS1-202ENST00000378910 NBPF5PQ86XG9 351 aaPredicted RBP13.96□□□□□ -0.18
NPHS1-202ENST00000378910 NBPF4Q96M43 638 aa13.96□□□□□ -0.18
NPHS1-202ENST00000378910 KIF1CO43896 1103 aaKnown RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 ERBB4Q15303 1308 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 RLBP1P12271 317 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 NUCKS1Q9H1E3 243 aaKnown RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 POLR3GO15318 223 aaPredicted RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 TSPYL4Q9UJ04 414 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 CUL7Q14999 1698 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
NPHS1-202ENST00000378910 NBPF20Q3BBV1 942 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 ZSCAN23Q3MJ62 389 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 SNX21Q969T3 373 aa13.95□□□□□ -0.18
NPHS1-202ENST00000378910 FBXW7Q969H0 707 aa13.94□□□□□ -0.18
NPHS1-202ENST00000378910 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
NPHS1-202ENST00000378910 SLC20A2Q08357 652 aa13.94□□□□□ -0.18
NPHS1-202ENST00000378910 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
NPHS1-202ENST00000378910 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
NPHS1-202ENST00000378910 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
NPHS1-202ENST00000378910 TTC36A6NLP5 189 aa13.94□□□□□ -0.18
NPHS1-202ENST00000378910 TESK2Q96S53 571 aa13.94□□□□□ -0.18
NPHS1-202ENST00000378910 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 JRKLQ9Y4A0 524 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 FSD2A1L4K1 749 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 GNAI3P08754 354 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 CASQ1P31415 396 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 NEBLO76041 1014 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 SMC5Q8IY18 1101 aa13.93□□□□□ -0.18
NPHS1-202ENST00000378910 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
NPHS1-202ENST00000378910 TEX14Q8IWB6 1497 aa13.92□□□□□ -0.18
NPHS1-202ENST00000378910 RPAP2Q8IXW5 612 aaPredicted RBP13.92□□□□□ -0.18
NPHS1-202ENST00000378910 UPF3BQ9BZI7 483 aaKnown RBP13.92□□□□□ -0.18
NPHS1-202ENST00000378910 ALDH1L2Q3SY69 923 aa13.92□□□□□ -0.18
NPHS1-202ENST00000378910 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
NPHS1-202ENST00000378910 TMX4Q9H1E5 349 aaPredicted RBP13.92□□□□□ -0.18
NPHS1-202ENST00000378910 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 SURF6O75683 361 aaKnown RBP13.91□□□□□ -0.18
NPHS1-202ENST00000378910 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
NPHS1-202ENST00000378910 IQGAP2Q13576 1575 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
NPHS1-202ENST00000378910 PDCP20941 246 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 EGFL6Q8IUX8 553 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
NPHS1-202ENST00000378910 GNAI2P04899 355 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 TMEM132AQ24JP5 1023 aa13.91□□□□□ -0.18
NPHS1-202ENST00000378910 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
NPHS1-202ENST00000378910 NUCB1Q02818 461 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 SKIDA1Q1XH10 827 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 CNTROBQ8N137 903 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 NF2P35240 595 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
NPHS1-202ENST00000378910 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
NPHS1-202ENST00000378910 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 NOLC1Q14978 699 aaKnown RBP eCLIP13.9□□□□□ -0.18
NPHS1-202ENST00000378910 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
NPHS1-202ENST00000378910 FCHSD2O94868 740 aa13.9□□□□□ -0.19
NPHS1-202ENST00000378910 ATP2B3Q16720 1220 aa13.9□□□□□ -0.19
NPHS1-202ENST00000378910 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.19
NPHS1-202ENST00000378910 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.19
NPHS1-202ENST00000378910 PES1O00541 588 aaKnown RBP13.89□□□□□ -0.19
NPHS1-202ENST00000378910 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
NPHS1-202ENST00000378910 FOSBP53539 338 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 BMS1Q14692 1282 aaKnown RBP13.89□□□□□ -0.19
NPHS1-202ENST00000378910 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 GDPD2Q9HCC8 539 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 SUFUQ9UMX1 484 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 A0A0G2JS52 829 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 LRSAM1Q6UWE0 723 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 SDF4Q9BRK5 362 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
NPHS1-202ENST00000378910 KRT85P78386 507 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 E2F4Q16254 413 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 IRAK4Q9NWZ3 460 aa13.89□□□□□ -0.19
NPHS1-202ENST00000378910 PRAG1Q86YV5 1406 aa13.88□□□□□ -0.19
NPHS1-202ENST00000378910 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
NPHS1-202ENST00000378910 GBP6Q6ZN66 633 aa13.88□□□□□ -0.19
NPHS1-202ENST00000378910 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
NPHS1-202ENST00000378910 SLC52A1Q9NWF4 448 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms