RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SPON1Q9HCB6 807 aa26.18■■□□□ 1.78
TMEM88B-201ENST00000378821 SLC15A2Q16348 729 aa26.16■■□□□ 1.78
TMEM88B-201ENST00000378821 KAT6BQ8WYB5 2073 aa26.16■■□□□ 1.78
TMEM88B-201ENST00000378821 NCAPD2Q15021 1401 aa26.15■■□□□ 1.78
TMEM88B-201ENST00000378821 MAP2P11137 1827 aaKnown RBP26.15■■□□□ 1.78
TMEM88B-201ENST00000378821 PDGFDQ9GZP0 370 aaPredicted RBP26.14■■□□□ 1.78
TMEM88B-201ENST00000378821 STK32BQ9NY57 414 aa26.14■■□□□ 1.78
TMEM88B-201ENST00000378821 EMILIN1Q9Y6C2 1016 aa26.14■■□□□ 1.78
TMEM88B-201ENST00000378821 DOT1LQ8TEK3 1739 aa26.14■■□□□ 1.77
TMEM88B-201ENST00000378821 WASHC2AQ641Q2 1341 aa26.13■■□□□ 1.77
TMEM88B-201ENST00000378821 NSD2O96028 1365 aa26.12■■□□□ 1.77
TMEM88B-201ENST00000378821 USHBP1Q8N6Y0 703 aa26.12■■□□□ 1.77
TMEM88B-201ENST00000378821 RAPGEF4Q8WZA2 1011 aa26.12■■□□□ 1.77
TMEM88B-201ENST00000378821 LRRC4BQ9NT99 713 aa26.11■■□□□ 1.77
TMEM88B-201ENST00000378821 PRIM1P49642 420 aaKnown RBP26.1■■□□□ 1.77
TMEM88B-201ENST00000378821 LY75O60449 1722 aa26.1■■□□□ 1.77
TMEM88B-201ENST00000378821 SLC27A3Q5K4L6 730 aa26.09■■□□□ 1.77
TMEM88B-201ENST00000378821 POLKQ9UBT6 870 aa26.09■■□□□ 1.77
TMEM88B-201ENST00000378821 TATP17735 454 aaPredicted RBP26.08■■□□□ 1.77
TMEM88B-201ENST00000378821 PANK3Q9H999 370 aa26.07■■□□□ 1.76
TMEM88B-201ENST00000378821 PKD1L3Q7Z443 1732 aa26.07■■□□□ 1.76
TMEM88B-201ENST00000378821 QSER1Q2KHR3 1735 aa26.06■■□□□ 1.76
TMEM88B-201ENST00000378821 PTGER2P43116 358 aa26.06■■□□□ 1.76
TMEM88B-201ENST00000378821 POLR3GLQ9BT43 218 aa26.05■■□□□ 1.76
TMEM88B-201ENST00000378821 PCDH11XQ9BZA7 1347 aa26.05■■□□□ 1.76
TMEM88B-201ENST00000378821 PCDH11YQ9BZA8 1340 aa26.05■■□□□ 1.76
TMEM88B-201ENST00000378821 AKT1S1Q96B36 256 aa26.04■■□□□ 1.76
TMEM88B-201ENST00000378821 ZBTB7AO95365 584 aa26.03■■□□□ 1.76
TMEM88B-201ENST00000378821 ZNF827Q17R98 1081 aa26.03■■□□□ 1.76
TMEM88B-201ENST00000378821 SYTL4Q96C24 671 aaPredicted RBP26.03■■□□□ 1.76
TMEM88B-201ENST00000378821 PPM1GO15355 546 aaPredicted RBP26.02■■□□□ 1.76
TMEM88B-201ENST00000378821 CYP27B1O15528 508 aa26.02■■□□□ 1.76
TMEM88B-201ENST00000378821 SGIP1Q9BQI5 828 aa26.02■■□□□ 1.76
TMEM88B-201ENST00000378821 MTFR1LQ9H019 292 aa26.02■■□□□ 1.76
TMEM88B-201ENST00000378821 PPP1R1BQ9UD71 204 aaPredicted RBP26.02■■□□□ 1.76
TMEM88B-201ENST00000378821 EYA1Q99502 592 aa26.01■■□□□ 1.75
TMEM88B-201ENST00000378821 NKX1-1Q15270 411 aaPredicted RBP26■■□□□ 1.75
TMEM88B-201ENST00000378821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26■■□□□ 1.75
TMEM88B-201ENST00000378821 PLEKHG2Q9H7P9 1386 aa25.99■■□□□ 1.75
TMEM88B-201ENST00000378821 COL24A1Q17RW2 1714 aa25.98■■□□□ 1.75
TMEM88B-201ENST00000378821 TOGARAM1Q9Y4F4 1720 aa25.98■■□□□ 1.75
TMEM88B-201ENST00000378821 ATF5Q9Y2D1 282 aaPredicted RBP25.98■■□□□ 1.75
TMEM88B-201ENST00000378821 ITGB4P16144 1822 aa25.97■■□□□ 1.75
TMEM88B-201ENST00000378821 TUBGCP6Q96RT7 1819 aa25.96■■□□□ 1.75
TMEM88B-201ENST00000378821 EIF4A2Q14240 407 aaKnown RBP25.96■■□□□ 1.75
TMEM88B-201ENST00000378821 SPG7Q9UQ90 795 aa25.95■■□□□ 1.74
TMEM88B-201ENST00000378821 TNNT2P45379 298 aaPredicted RBP25.94■■□□□ 1.74
TMEM88B-201ENST00000378821 KCNQ4P56696 695 aa25.94■■□□□ 1.74
TMEM88B-201ENST00000378821 SLC16A10Q8TF71 515 aa25.94■■□□□ 1.74
TMEM88B-201ENST00000378821 CCNL1Q9UK58 526 aaPredicted RBP25.93■■□□□ 1.74
TMEM88B-201ENST00000378821 PNPLA7Q6ZV29 1317 aa25.92■■□□□ 1.74
TMEM88B-201ENST00000378821 IGSF1Q8N6C5 1336 aa25.92■■□□□ 1.74
TMEM88B-201ENST00000378821 KIF7Q2M1P5 1343 aa25.91■■□□□ 1.74
TMEM88B-201ENST00000378821 TAF1LQ8IZX4 1826 aa25.9■■□□□ 1.74
TMEM88B-201ENST00000378821 HMGB2P26583 209 aaKnown RBP25.89■■□□□ 1.74
TMEM88B-201ENST00000378821 AMER1Q5JTC6 1135 aaPredicted RBP25.89■■□□□ 1.74
TMEM88B-201ENST00000378821 KNSTRNQ9Y448 316 aa25.89■■□□□ 1.74
TMEM88B-201ENST00000378821 C5P01031 1676 aa25.89■■□□□ 1.73
TMEM88B-201ENST00000378821 MAP3K5Q99683 1374 aa25.88■■□□□ 1.73
TMEM88B-201ENST00000378821 MPRIPQ6WCQ1 1025 aa25.88■■□□□ 1.73
TMEM88B-201ENST00000378821 MORC1Q86VD1 984 aa25.88■■□□□ 1.73
TMEM88B-201ENST00000378821 TFCP2L1Q9NZI6 479 aa25.88■■□□□ 1.73
TMEM88B-201ENST00000378821 PALLDQ8WX93 1383 aa25.87■■□□□ 1.73
TMEM88B-201ENST00000378821 PIGBQ92521 554 aa25.87■■□□□ 1.73
TMEM88B-201ENST00000378821 SYT17Q9BSW7 474 aa25.87■■□□□ 1.73
TMEM88B-201ENST00000378821 PHKG2P15735 406 aa25.86■■□□□ 1.73
TMEM88B-201ENST00000378821 IFNL2Q8IZJ0 200 aa25.86■■□□□ 1.73
TMEM88B-201ENST00000378821 SMARCC1Q92922 1105 aaPredicted RBP25.86■■□□□ 1.73
TMEM88B-201ENST00000378821 ARXQ96QS3 562 aa25.86■■□□□ 1.73
TMEM88B-201ENST00000378821 FHDC1Q9C0D6 1143 aaPredicted RBP25.86■■□□□ 1.73
TMEM88B-201ENST00000378821 PER1O15534 1290 aaPredicted RBP25.85■■□□□ 1.73
TMEM88B-201ENST00000378821 DCAF8L1A6NGE4 600 aa25.8■■□□□ 1.72
TMEM88B-201ENST00000378821 COL23A1Q86Y22 540 aaPredicted RBP25.8■■□□□ 1.72
TMEM88B-201ENST00000378821 C4BP0C0L5 1744 aa25.8■■□□□ 1.72
TMEM88B-201ENST00000378821 KDRP35968 1356 aa25.79■■□□□ 1.72
TMEM88B-201ENST00000378821 IL13P35225 146 aa25.78■■□□□ 1.72
TMEM88B-201ENST00000378821 TMOD3Q9NYL9 352 aa25.78■■□□□ 1.72
TMEM88B-201ENST00000378821 AMOTQ4VCS5 1084 aa25.77■■□□□ 1.72
TMEM88B-201ENST00000378821 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
TMEM88B-201ENST00000378821 ERVV-2B6SEH9 535 aa25.76■■□□□ 1.71
TMEM88B-201ENST00000378821 POLD1P28340 1107 aa25.76■■□□□ 1.71
TMEM88B-201ENST00000378821 FLAD1Q8NFF5 587 aa25.76■■□□□ 1.71
TMEM88B-201ENST00000378821 UBR3Q6ZT12 1888 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 ZNF831Q5JPB2 1677 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 NPC1L1Q9UHC9 1359 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 LOC102724428A0A0B4J2F2 783 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 HSP90AB1P08238 724 aaKnown RBP25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 SIK1P57059 783 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 DCAF5Q96JK2 942 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 ASAP1Q9ULH1 1129 aa25.75■■□□□ 1.71
TMEM88B-201ENST00000378821 AEBP1Q8IUX7 1158 aa25.74■■□□□ 1.71
TMEM88B-201ENST00000378821 ATG3Q9NT62 314 aa25.73■■□□□ 1.71
TMEM88B-201ENST00000378821 YY1P25490 414 aa25.72■■□□□ 1.71
TMEM88B-201ENST00000378821 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
TMEM88B-201ENST00000378821 MTHFSP49914 203 aa25.71■■□□□ 1.71
TMEM88B-201ENST00000378821 SULT6B1Q6IMI4 303 aa25.71■■□□□ 1.71
TMEM88B-201ENST00000378821 ZNF530Q6P9A1 599 aaPredicted RBP25.7■■□□□ 1.7
TMEM88B-201ENST00000378821 AMIGO3Q86WK7 504 aa25.7■■□□□ 1.7
TMEM88B-201ENST00000378821 LINC00116Q8NCU8 138 aa25.7■■□□□ 1.7
TMEM88B-201ENST00000378821 ITPK1Q13572 414 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms