RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PLEKHG2Q9H7P9 1386 aa25.15■■□□□ 1.62
SSU72-203ENST00000378725 ANP32CO43423 234 aa25.14■■□□□ 1.62
SSU72-203ENST00000378725 FAM182BQ5T319 152 aa25.14■■□□□ 1.62
SSU72-203ENST00000378725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.14■■□□□ 1.622e-6■□□□□ 10.3
SSU72-203ENST00000378725 FAM196AQ6ZSG2 479 aa25.13■■□□□ 1.61
SSU72-203ENST00000378725 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
SSU72-203ENST00000378725 SOCS7O14512 581 aa25.11■■□□□ 1.61
SSU72-203ENST00000378725 BCL9O00512 1426 aa25.11■■□□□ 1.61
SSU72-203ENST00000378725 HMOX1P09601 288 aa25.1■■□□□ 1.61
SSU72-203ENST00000378725 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
SSU72-203ENST00000378725 SPG7Q9UQ90 795 aa25.09■■□□□ 1.61
SSU72-203ENST00000378725 UPF1Q92900 1129 aaKnown RBP eCLIP25.08■■□□□ 1.613e-8■□□□□ 8.4
SSU72-203ENST00000378725 AMOTQ4VCS5 1084 aa25.07■■□□□ 1.6
SSU72-203ENST00000378725 U2AF1L5P0DN76 240 aaPredicted RBP25.06■■□□□ 1.6
SSU72-203ENST00000378725 U2AF1Q01081 240 aaKnown RBP eCLIP25.06■■□□□ 1.6
SSU72-203ENST00000378725 PLEKHO1Q53GL0 409 aaPredicted RBP25.06■■□□□ 1.6
SSU72-203ENST00000378725 PCDH11XQ9BZA7 1347 aa25.06■■□□□ 1.6
SSU72-203ENST00000378725 PCDH11YQ9BZA8 1340 aa25.06■■□□□ 1.6
SSU72-203ENST00000378725 CYP27B1O15528 508 aa25.05■■□□□ 1.6
SSU72-203ENST00000378725 FCHSD2O94868 740 aa25.05■■□□□ 1.6
SSU72-203ENST00000378725 RSPH6AQ9H0K4 717 aa25.05■■□□□ 1.6
SSU72-203ENST00000378725 CCDC125Q86Z20 511 aa25.04■■□□□ 1.6
SSU72-203ENST00000378725 PKD1L3Q7Z443 1732 aa25.03■■□□□ 1.6
SSU72-203ENST00000378725 SHANK3Q9BYB0 1731 aa25.03■■□□□ 1.6
SSU72-203ENST00000378725 NKX1-1Q15270 411 aaPredicted RBP25.02■■□□□ 1.6
SSU72-203ENST00000378725 PHKG2P15735 406 aa25.01■■□□□ 1.59
SSU72-203ENST00000378725 IFNL2Q8IZJ0 200 aa25.01■■□□□ 1.59
SSU72-203ENST00000378725 TRIM37O94972 964 aa24.99■■□□□ 1.59
SSU72-203ENST00000378725 PRKAR2BP31323 418 aa24.99■■□□□ 1.59
SSU72-203ENST00000378725 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
SSU72-203ENST00000378725 MTHFSDQ2M296 383 aaKnown RBP24.97■■□□□ 1.59
SSU72-203ENST00000378725 ZNF530Q6P9A1 599 aaPredicted RBP24.97■■□□□ 1.59
SSU72-203ENST00000378725 PHACTR3Q96KR7 559 aa24.97■■□□□ 1.59
SSU72-203ENST00000378725 BCL11BQ9C0K0 894 aaPredicted RBP24.97■■□□□ 1.59
SSU72-203ENST00000378725 PLEKHF1Q96S99 279 aa24.96■■□□□ 1.59
SSU72-203ENST00000378725 KCNQ2O43526 872 aa24.95■■□□□ 1.58
SSU72-203ENST00000378725 DIEXFQ68CQ4 756 aaKnown RBP24.95■■□□□ 1.58
SSU72-203ENST00000378725 ACSBG1Q96GR2 724 aa24.95■■□□□ 1.58
SSU72-203ENST00000378725 PNNQ9H307 717 aaKnown RBP24.95■■□□□ 1.58
SSU72-203ENST00000378725 HSP90AB1P08238 724 aaKnown RBP24.94■■□□□ 1.58
SSU72-203ENST00000378725 AKAP4Q5JQC9 854 aa24.94■■□□□ 1.58
SSU72-203ENST00000378725 PTF1AQ7RTS3 328 aa24.94■■□□□ 1.58
SSU72-203ENST00000378725 SF3B2Q13435 895 aaKnown RBP24.93■■□□□ 1.58
SSU72-203ENST00000378725 WDR43Q15061 677 aaKnown RBP eCLIP24.93■■□□□ 1.58
SSU72-203ENST00000378725 C1orf141Q5JVX7 400 aa24.93■■□□□ 1.58
SSU72-203ENST00000378725 ADAMTS8Q9UP79 889 aa24.93■■□□□ 1.58
SSU72-203ENST00000378725 PRIM1P49642 420 aaKnown RBP24.92■■□□□ 1.58
SSU72-203ENST00000378725 GAS2L2Q8NHY3 880 aa24.92■■□□□ 1.58
SSU72-203ENST00000378725 DCAF5Q96JK2 942 aa24.92■■□□□ 1.58
SSU72-203ENST00000378725 SBF2Q86WG5 1849 aa24.91■■□□□ 1.58
SSU72-203ENST00000378725 EP400Q96L91 3159 aa24.9■■□□□ 1.58
SSU72-203ENST00000378725 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
SSU72-203ENST00000378725 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
SSU72-203ENST00000378725 APBA3O96018 575 aa24.89■■□□□ 1.58
SSU72-203ENST00000378725 NHSQ6T4R5 1651 aa24.88■■□□□ 1.57
SSU72-203ENST00000378725 ERVV-2B6SEH9 535 aa24.87■■□□□ 1.57
SSU72-203ENST00000378725 NEFMP07197 916 aa24.87■■□□□ 1.57
SSU72-203ENST00000378725 BAG6P46379 1132 aa24.87■■□□□ 1.57
SSU72-203ENST00000378725 MPRIPQ6WCQ1 1025 aa24.87■■□□□ 1.57
SSU72-203ENST00000378725 KDM6AO15550 1401 aaPredicted RBP24.86■■□□□ 1.57
SSU72-203ENST00000378725 TNS1Q9HBL0 1735 aaKnown RBP24.86■■□□□ 1.57
SSU72-203ENST00000378725 PLSCR1O15162 318 aa24.86■■□□□ 1.57
SSU72-203ENST00000378725 DEFB132Q7Z7B7 95 aa24.86■■□□□ 1.57
SSU72-203ENST00000378725 SYTL4Q96C24 671 aaPredicted RBP24.86■■□□□ 1.57
SSU72-203ENST00000378725 GNAT3A8MTJ3 354 aa24.85■■□□□ 1.57
SSU72-203ENST00000378725 LGR6Q9HBX8 967 aa24.85■■□□□ 1.57
SSU72-203ENST00000378725 RNMTO43148 476 aaKnown RBP24.84■■□□□ 1.57
SSU72-203ENST00000378725 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
SSU72-203ENST00000378725 CAMKK2Q96RR4 588 aa24.84■■□□□ 1.57
SSU72-203ENST00000378725 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
SSU72-203ENST00000378725 MAP3K5Q99683 1374 aa24.83■■□□□ 1.57
SSU72-203ENST00000378725 EN1Q05925 392 aaPredicted RBP24.83■■□□□ 1.57
SSU72-203ENST00000378725 PIGBQ92521 554 aa24.83■■□□□ 1.57
SSU72-203ENST00000378725 TOGARAM1Q9Y4F4 1720 aa24.83■■□□□ 1.57
SSU72-203ENST00000378725 MAPK8IP3Q9UPT6 1336 aa24.83■■□□□ 1.56
SSU72-203ENST00000378725 CCER2I3L3R5 266 aa24.82■■□□□ 1.56
SSU72-203ENST00000378725 HTATSF1O43719 755 aaKnown RBP24.82■■□□□ 1.56
SSU72-203ENST00000378725 NFE2L2Q16236 605 aa24.82■■□□□ 1.56
SSU72-203ENST00000378725 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
SSU72-203ENST00000378725 IL17REQ8NFR9 667 aa24.81■■□□□ 1.56
SSU72-203ENST00000378725 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
SSU72-203ENST00000378725 CABP4P57796 275 aa24.8■■□□□ 1.56
SSU72-203ENST00000378725 EZH2Q15910 746 aaKnown RBP24.79■■□□□ 1.56
SSU72-203ENST00000378725 ADAMTS7Q9UKP4 1686 aa24.78■■□□□ 1.56
SSU72-203ENST00000378725 NFATC2IPQ8NCF5 419 aa24.78■■□□□ 1.56
SSU72-203ENST00000378725 SLC52A2Q9HAB3 445 aa24.78■■□□□ 1.56
SSU72-203ENST00000378725 TMPOP42166 694 aaKnown RBP24.77■■□□□ 1.56
SSU72-203ENST00000378725 MIER1Q8N108 512 aa24.77■■□□□ 1.56
SSU72-203ENST00000378725 PROM2Q8N271 834 aa24.77■■□□□ 1.56
SSU72-203ENST00000378725 CEMIPQ8WUJ3 1361 aa24.77■■□□□ 1.56
SSU72-203ENST00000378725 RTF1Q92541 710 aaKnown RBP24.76■■□□□ 1.55
SSU72-203ENST00000378725 BTAF1O14981 1849 aa24.76■■□□□ 1.55
SSU72-203ENST00000378725 ITGB4P16144 1822 aa24.75■■□□□ 1.55
SSU72-203ENST00000378725 SCN11AQ9UI33 1791 aa24.75■■□□□ 1.55
SSU72-203ENST00000378725 RIPK4P57078 832 aa24.74■■□□□ 1.55
SSU72-203ENST00000378725 SMARCC1Q92922 1105 aaPredicted RBP24.74■■□□□ 1.55
SSU72-203ENST00000378725 ATG3Q9NT62 314 aa24.74■■□□□ 1.55
SSU72-203ENST00000378725 MRC1P22897 1456 aa24.74■■□□□ 1.55
SSU72-203ENST00000378725 TXNRD1Q16881 649 aa24.73■■□□□ 1.55
SSU72-203ENST00000378725 MCM10Q7L590 875 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms