RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
ITM2B-201ENST00000378549 U2SURPO15042 1029 aaKnown RBP23.13■■□□□ 1.29
ITM2B-201ENST00000378549 KDRP35968 1356 aa23.13■■□□□ 1.29
ITM2B-201ENST00000378549 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
ITM2B-201ENST00000378549 PLEKHG2Q9H7P9 1386 aa23.12■■□□□ 1.29
ITM2B-201ENST00000378549 FAM182BQ5T319 152 aa23.11■■□□□ 1.29
ITM2B-201ENST00000378549 AEBP1Q8IUX7 1158 aa23.11■■□□□ 1.29
ITM2B-201ENST00000378549 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
ITM2B-201ENST00000378549 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
ITM2B-201ENST00000378549 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.29
ITM2B-201ENST00000378549 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.29
ITM2B-201ENST00000378549 DOT1LQ8TEK3 1739 aa23.08■■□□□ 1.29
ITM2B-201ENST00000378549 HMOX1P09601 288 aa23.08■■□□□ 1.29
ITM2B-201ENST00000378549 MARCH10Q8NA82 808 aaPredicted RBP23.08■■□□□ 1.29
ITM2B-201ENST00000378549 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
ITM2B-201ENST00000378549 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.28
ITM2B-201ENST00000378549 SOCS7O14512 581 aa23.07■■□□□ 1.28
ITM2B-201ENST00000378549 DDX54Q8TDD1 881 aaKnown RBP23.07■■□□□ 1.28
ITM2B-201ENST00000378549 TNS1Q9HBL0 1735 aaKnown RBP23.07■■□□□ 1.28
ITM2B-201ENST00000378549 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
ITM2B-201ENST00000378549 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
ITM2B-201ENST00000378549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.06■■□□□ 1.281e-12■□□□□ 9.6
ITM2B-201ENST00000378549 NHSQ6T4R5 1651 aa23.05■■□□□ 1.28
ITM2B-201ENST00000378549 BCL9O00512 1426 aa23.05■■□□□ 1.28
ITM2B-201ENST00000378549 PLEKHO1Q53GL0 409 aaPredicted RBP23.03■■□□□ 1.28
ITM2B-201ENST00000378549 AMOTQ4VCS5 1084 aa23.02■■□□□ 1.28
ITM2B-201ENST00000378549 UPF1Q92900 1129 aaKnown RBP eCLIP23.02■■□□□ 1.28
ITM2B-201ENST00000378549 ITGB4P16144 1822 aa23.02■■□□□ 1.28
ITM2B-201ENST00000378549 TOGARAM1Q9Y4F4 1720 aa23■■□□□ 1.27
ITM2B-201ENST00000378549 BTAF1O14981 1849 aa22.99■■□□□ 1.27
ITM2B-201ENST00000378549 CYP27B1O15528 508 aa22.99■■□□□ 1.27
ITM2B-201ENST00000378549 SF3B2Q13435 895 aaKnown RBP22.99■■□□□ 1.27
ITM2B-201ENST00000378549 CCDC125Q86Z20 511 aa22.99■■□□□ 1.27
ITM2B-201ENST00000378549 FCHSD2O94868 740 aa22.98■■□□□ 1.27
ITM2B-201ENST00000378549 TRIM37O94972 964 aa22.98■■□□□ 1.27
ITM2B-201ENST00000378549 PRKAR2BP31323 418 aa22.98■■□□□ 1.27
ITM2B-201ENST00000378549 ZNF530Q6P9A1 599 aaPredicted RBP22.98■■□□□ 1.27
ITM2B-201ENST00000378549 IFNL2Q8IZJ0 200 aa22.98■■□□□ 1.27
ITM2B-201ENST00000378549 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
ITM2B-201ENST00000378549 SCN11AQ9UI33 1791 aa22.98■■□□□ 1.27
ITM2B-201ENST00000378549 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
ITM2B-201ENST00000378549 C1orf141Q5JVX7 400 aa22.97■■□□□ 1.27
ITM2B-201ENST00000378549 DLG5Q8TDM6 1919 aa22.96■■□□□ 1.27
ITM2B-201ENST00000378549 PHKG2P15735 406 aa22.96■■□□□ 1.27
ITM2B-201ENST00000378549 RGPD3A6NKT7 1758 aaPredicted RBP22.95■■□□□ 1.26
ITM2B-201ENST00000378549 NEFMP07197 916 aa22.95■■□□□ 1.26
ITM2B-201ENST00000378549 RGPD4Q7Z3J3 1758 aa22.95■■□□□ 1.26
ITM2B-201ENST00000378549 ACSBG1Q96GR2 724 aa22.95■■□□□ 1.26
ITM2B-201ENST00000378549 HSP90AB1P08238 724 aaKnown RBP22.94■■□□□ 1.26
ITM2B-201ENST00000378549 PNNQ9H307 717 aaKnown RBP22.94■■□□□ 1.26
ITM2B-201ENST00000378549 DIEXFQ68CQ4 756 aaKnown RBP22.93■■□□□ 1.26
ITM2B-201ENST00000378549 NKX1-1Q15270 411 aaPredicted RBP22.92■■□□□ 1.26
ITM2B-201ENST00000378549 GAS2L2Q8NHY3 880 aa22.92■■□□□ 1.26
ITM2B-201ENST00000378549 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
ITM2B-201ENST00000378549 MRS2Q9HD23 443 aa22.92■■□□□ 1.26
ITM2B-201ENST00000378549 MTHFSDQ2M296 383 aaKnown RBP22.91■■□□□ 1.26
ITM2B-201ENST00000378549 SYTL4Q96C24 671 aaPredicted RBP22.91■■□□□ 1.26
ITM2B-201ENST00000378549 MAPK8IP3Q9UPT6 1336 aa22.9■■□□□ 1.26
ITM2B-201ENST00000378549 BAG6P46379 1132 aa22.9■■□□□ 1.26
ITM2B-201ENST00000378549 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
ITM2B-201ENST00000378549 KCNQ2O43526 872 aa22.89■■□□□ 1.25
ITM2B-201ENST00000378549 APBA3O96018 575 aa22.89■■□□□ 1.25
ITM2B-201ENST00000378549 CCDC184Q52MB2 194 aa22.89■■□□□ 1.25
ITM2B-201ENST00000378549 DCAF5Q96JK2 942 aa22.89■■□□□ 1.25
ITM2B-201ENST00000378549 PHACTR3Q96KR7 559 aa22.89■■□□□ 1.25
ITM2B-201ENST00000378549 ADAMTS7Q9UKP4 1686 aa22.89■■□□□ 1.25
ITM2B-201ENST00000378549 PRIM1P49642 420 aaKnown RBP22.88■■□□□ 1.25
ITM2B-201ENST00000378549 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
ITM2B-201ENST00000378549 MAP3K5Q99683 1374 aa22.88■■□□□ 1.25
ITM2B-201ENST00000378549 PTF1AQ7RTS3 328 aa22.86■■□□□ 1.25
ITM2B-201ENST00000378549 ADAMTS8Q9UP79 889 aa22.86■■□□□ 1.25
ITM2B-201ENST00000378549 RREB1Q92766 1687 aa22.86■■□□□ 1.25
ITM2B-201ENST00000378549 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
ITM2B-201ENST00000378549 DEFB132Q7Z7B7 95 aa22.85■■□□□ 1.25
ITM2B-201ENST00000378549 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
ITM2B-201ENST00000378549 LY75O60449 1722 aa22.85■■□□□ 1.25
ITM2B-201ENST00000378549 GNAT3A8MTJ3 354 aa22.84■■□□□ 1.25
ITM2B-201ENST00000378549 TMOD3Q9NYL9 352 aa22.84■■□□□ 1.25
ITM2B-201ENST00000378549 ERVV-2B6SEH9 535 aa22.83■■□□□ 1.25
ITM2B-201ENST00000378549 SIPA1L3O60292 1781 aaPredicted RBP22.83■■□□□ 1.24
ITM2B-201ENST00000378549 MRC1P22897 1456 aa22.82■■□□□ 1.24
ITM2B-201ENST00000378549 EN1Q05925 392 aaPredicted RBP22.82■■□□□ 1.24
ITM2B-201ENST00000378549 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
ITM2B-201ENST00000378549 RUNDC1Q96C34 613 aa22.81■■□□□ 1.24
ITM2B-201ENST00000378549 NUP188Q5SRE5 1749 aa22.81■■□□□ 1.24
ITM2B-201ENST00000378549 PLSCR1O15162 318 aa22.8■■□□□ 1.24
ITM2B-201ENST00000378549 CABP4P57796 275 aa22.8■■□□□ 1.24
ITM2B-201ENST00000378549 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
ITM2B-201ENST00000378549 RTF1Q92541 710 aaKnown RBP22.8■■□□□ 1.24
ITM2B-201ENST00000378549 RNMTO43148 476 aaKnown RBP22.79■■□□□ 1.24
ITM2B-201ENST00000378549 NFE2L2Q16236 605 aa22.79■■□□□ 1.24
ITM2B-201ENST00000378549 PIGBQ92521 554 aa22.78■■□□□ 1.24
ITM2B-201ENST00000378549 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
ITM2B-201ENST00000378549 CCER2I3L3R5 266 aa22.77■■□□□ 1.24
ITM2B-201ENST00000378549 EZH2Q15910 746 aaKnown RBP22.77■■□□□ 1.24
ITM2B-201ENST00000378549 CAMKK2Q96RR4 588 aa22.77■■□□□ 1.24
ITM2B-201ENST00000378549 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
ITM2B-201ENST00000378549 HTATSF1O43719 755 aaKnown RBP22.76■■□□□ 1.23
ITM2B-201ENST00000378549 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
ITM2B-201ENST00000378549 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms